RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 PCDHB11Q9Y5F2 797 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 CFAP20Q9Y6A4 193 aaKnown RBP19.56■□□□□ 0.72
HPS3-206ENST00000486530 NUP214P35658 2090 aaPredicted RBP19.56■□□□□ 0.72
HPS3-206ENST00000486530 UNC80Q8N2C7 3258 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 H3BQ06 376 aaPredicted RBP19.56■□□□□ 0.72
HPS3-206ENST00000486530 RNGTTO60942 597 aaKnown RBP19.56■□□□□ 0.72
HPS3-206ENST00000486530 PRKD3O94806 890 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 CCNDBP1O95273 360 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 SERPINA1P01009 418 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 ACP5P13686 325 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 PPIBP23284 216 aaKnown RBP19.56■□□□□ 0.72
HPS3-206ENST00000486530 CTHP32929 405 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 NKG7Q16617 165 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 LPCAT2Q7L5N7 544 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 CHST15Q7LFX5 561 aaPredicted RBP19.56■□□□□ 0.72
HPS3-206ENST00000486530 R3HCC1LQ7Z5L2 792 aaKnown RBP19.56■□□□□ 0.72
HPS3-206ENST00000486530 EID3Q8N140 333 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 RAB42Q8N4Z0 105 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.56■□□□□ 0.72
HPS3-206ENST00000486530 NETO1Q8TDF5 533 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 SMPDL3AQ92484 453 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 MENTQ9BUN1 341 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 SPATA9Q9BWV2 254 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 SLC17A9Q9BYT1 436 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 OR51B5Q9H339 312 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 REEP4Q9H6H4 257 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 DNAJB9Q9UBS3 223 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 TAC3Q9UHF0 121 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 CORO2BQ9UQ03 480 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 GMEB1Q9Y692 573 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 COL4A2P08572 1712 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 PRR23AA6NEV1 266 aa19.55■□□□□ 0.72
HPS3-206ENST00000486530 UPK1AO00322 258 aa19.55■□□□□ 0.72
HPS3-206ENST00000486530 RNASET2O00584 256 aaKnown RBP19.55■□□□□ 0.72
HPS3-206ENST00000486530 YY2O15391 372 aa19.55■□□□□ 0.72
HPS3-206ENST00000486530 HOXB2P14652 356 aa19.55■□□□□ 0.72
HPS3-206ENST00000486530 CXCR2P25025 360 aa19.55■□□□□ 0.72
HPS3-206ENST00000486530 PTX3P26022 381 aaPredicted RBP19.55■□□□□ 0.72
HPS3-206ENST00000486530 RPL10P27635 214 aaKnown RBP19.55■□□□□ 0.72
HPS3-206ENST00000486530 ADPRHP54922 357 aa19.55■□□□□ 0.72
HPS3-206ENST00000486530 SLC36A3Q495N2 470 aa19.55■□□□□ 0.72
HPS3-206ENST00000486530 CPZQ66K79 652 aa19.55■□□□□ 0.72
HPS3-206ENST00000486530 ZNF551Q7Z340 670 aaPredicted RBP19.55■□□□□ 0.72
HPS3-206ENST00000486530 PGBD3Q8N328 593 aa19.55■□□□□ 0.72
HPS3-206ENST00000486530 C2orf73Q8N5S3 287 aaPredicted RBP19.55■□□□□ 0.72
HPS3-206ENST00000486530 IL17RCQ8NAC3 791 aa19.55■□□□□ 0.72
HPS3-206ENST00000486530 ZNF740Q8NDX6 193 aa19.55■□□□□ 0.72
HPS3-206ENST00000486530 TMBIM1Q969X1 311 aa19.55■□□□□ 0.72
HPS3-206ENST00000486530 MYNNQ9NPC7 610 aa19.55■□□□□ 0.72
HPS3-206ENST00000486530 CD320Q9NPF0 282 aa19.55■□□□□ 0.72
HPS3-206ENST00000486530 WASH6PQ9NQA3 447 aa19.55■□□□□ 0.72
HPS3-206ENST00000486530 ATAD3AQ9NVI7 634 aa19.55■□□□□ 0.72
HPS3-206ENST00000486530 SCML1Q9UN30 329 aa19.55■□□□□ 0.72
HPS3-206ENST00000486530 KCNJ13O60928 360 aa19.54■□□□□ 0.72
HPS3-206ENST00000486530 CLPTM1O96005 669 aa19.54■□□□□ 0.72
HPS3-206ENST00000486530 MYF6P23409 242 aa19.54■□□□□ 0.72
HPS3-206ENST00000486530 IGFALSP35858 605 aa19.54■□□□□ 0.72
HPS3-206ENST00000486530 TMEM214Q6NUQ4 689 aaKnown RBP19.54■□□□□ 0.72
HPS3-206ENST00000486530 HORMAD1Q86X24 394 aa19.54■□□□□ 0.72
HPS3-206ENST00000486530 MAGEE2Q8TD90 523 aaPredicted RBP19.54■□□□□ 0.72
HPS3-206ENST00000486530 AIF1LQ9BQI0 150 aa19.54■□□□□ 0.72
HPS3-206ENST00000486530 ACAT2Q9BWD1 397 aa19.54■□□□□ 0.72
HPS3-206ENST00000486530 TPT1P8Q9HAU6 139 aa19.54■□□□□ 0.72
HPS3-206ENST00000486530 PREBQ9HCU5 417 aa19.54■□□□□ 0.72
HPS3-206ENST00000486530 AASDHPPTQ9NRN7 309 aa19.54■□□□□ 0.72
HPS3-206ENST00000486530 SH3BP4Q9P0V3 963 aa19.54■□□□□ 0.72
HPS3-206ENST00000486530 SAMD4AQ9UPU9 718 aaKnown RBP19.54■□□□□ 0.72
HPS3-206ENST00000486530 SLC17A4Q9Y2C5 497 aa19.54■□□□□ 0.72
HPS3-206ENST00000486530 TMEM265A0A087WTH1 108 aa19.54■□□□□ 0.72
HPS3-206ENST00000486530 C2CD4DB7Z1M9 353 aa19.54■□□□□ 0.72
HPS3-206ENST00000486530 ADAM23O75077 832 aa19.54■□□□□ 0.72
HPS3-206ENST00000486530 CST1P01037 141 aa19.54■□□□□ 0.72
HPS3-206ENST00000486530 APOFQ13790 326 aa19.54■□□□□ 0.72
HPS3-206ENST00000486530 VMACQ2NL98 169 aa19.54■□□□□ 0.72
HPS3-206ENST00000486530 ZCCHC8Q6NZY4 707 aaKnown RBP19.54■□□□□ 0.72
HPS3-206ENST00000486530 ISLR2Q6UXK2 745 aa19.54■□□□□ 0.72
HPS3-206ENST00000486530 VN1R5Q7Z5H4 357 aa19.54■□□□□ 0.72
HPS3-206ENST00000486530 ZZZ3Q8IYH5 903 aa19.54■□□□□ 0.72
HPS3-206ENST00000486530 FAM47BQ8NA70 645 aa19.54■□□□□ 0.72
HPS3-206ENST00000486530 WDR48Q8TAF3 677 aa19.54■□□□□ 0.72
HPS3-206ENST00000486530 SDCCAG3Q96C92 435 aa19.54■□□□□ 0.72
HPS3-206ENST00000486530 C12orf66Q96MD2 445 aa19.54■□□□□ 0.72
HPS3-206ENST00000486530 PITHD1Q9GZP4 211 aaPredicted RBP19.54■□□□□ 0.72
HPS3-206ENST00000486530 RHBGQ9H310 441 aa19.54■□□□□ 0.72
HPS3-206ENST00000486530 OSGEPL1Q9H4B0 414 aa19.54■□□□□ 0.72
HPS3-206ENST00000486530 TRPV5Q9NQA5 729 aa19.54■□□□□ 0.72
HPS3-206ENST00000486530 ZNF282Q9UDV7 671 aaPredicted RBP19.54■□□□□ 0.72
HPS3-206ENST00000486530 VPS4AQ9UN37 437 aa19.54■□□□□ 0.72
HPS3-206ENST00000486530 EXO1Q9UQ84 846 aaKnown RBP19.54■□□□□ 0.72
HPS3-206ENST00000486530 ERVK-11Q9UQG0 969 aa19.54■□□□□ 0.72
HPS3-206ENST00000486530 A0A1W2PQF6 199 aa19.53■□□□□ 0.72
HPS3-206ENST00000486530 C1orf226A1L170 272 aa19.53■□□□□ 0.72
HPS3-206ENST00000486530 SAP18O00422 153 aaKnown RBP19.53■□□□□ 0.72
HPS3-206ENST00000486530 PLOD2O00469 737 aa19.53■□□□□ 0.72
HPS3-206ENST00000486530 KCNK5O95279 499 aa19.53■□□□□ 0.72
HPS3-206ENST00000486530 H6PDO95479 791 aa19.53■□□□□ 0.72
HPS3-206ENST00000486530 KLF8O95600 359 aaPredicted RBP19.53■□□□□ 0.72
HPS3-206ENST00000486530 EGFP01133 1207 aa19.53■□□□□ 0.72
HPS3-206ENST00000486530 CEACAM5P06731 702 aa19.53■□□□□ 0.72
HPS3-206ENST00000486530 PABPC4LP0CB38 370 aaKnown RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms