RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 SLC6A20Q9NP91 592 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 KCNK9Q9NPC2 374 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 ASCL3Q9NQ33 180 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 PFDN4Q9NQP4 134 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 WDR70Q9NW82 654 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 NMRK1Q9NWW6 199 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 NKIRAS1Q9NYS0 192 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 TMEM216Q9P0N5 145 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 ZFP69BQ9UJL9 534 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 IKZF3Q9UKT9 509 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 PADI2Q9Y2J8 665 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 KLHL20Q9Y2M5 609 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 TMEM184BQ9Y519 407 aaPredicted RBP7.91□□□□□ -1.14
SF3A1-208ENST00000485618 SEC16AO15027 2179 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 FITM1A5D6W6 292 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 KRT87PA6NCN2 255 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 MEN1O00255 615 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 HAT1O14929 419 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 RAD1O60671 282 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 TRIM13O60858 407 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 CTSVO60911 334 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 CRCPO75575 148 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 SUPT7LO94864 414 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 CLDN9O95484 217 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 NTRK1P04629 796 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 SERPIND1P05546 499 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 MTHFD2P13995 350 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 H2AFXP16104 143 aaPredicted RBP7.9□□□□□ -1.14
SF3A1-208ENST00000485618 SERPINB5P36952 375 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 GDF5P43026 501 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 CCNG1P51959 295 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 PKNOX1P55347 436 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 DNAJB13P59910 316 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 DCDP81605 110 aaKnown RBP7.9□□□□□ -1.14
SF3A1-208ENST00000485618 IFT88Q13099 833 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 CHIT1Q13231 466 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 FAM53BQ14153 422 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 RCN2Q14257 317 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 HERC3Q15034 1050 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 ZIC1Q15915 447 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 RBBP7Q16576 425 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 HSP90B2PQ58FF3 399 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 CATSPEREQ5SY80 951 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 LIPMQ5VYY2 423 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 TTC19Q6DKK2 380 aaPredicted RBP7.9□□□□□ -1.14
SF3A1-208ENST00000485618 RHBDD2Q6NTF9 364 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 C16orf46Q6P387 395 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 ZYG11AQ6WRX3 759 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 CHSY3Q70JA7 882 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 MILR1Q7Z6M3 343 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 CCNYL1Q8N7R7 359 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 C7orf57Q8NEG2 295 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 OR1L3Q8NH93 324 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 MR1Q95460 341 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 FAR2Q96K12 515 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 ZNF285Q96NJ3 590 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 OR2A5Q96R48 311 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 NRTNQ99748 197 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 ROGDIQ9GZN7 287 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 ANKHQ9HCJ1 492 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 CUTCQ9NTM9 273 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 ZNF358Q9NW07 568 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 CUEDC1Q9NWM3 386 aaPredicted RBP7.9□□□□□ -1.14
SF3A1-208ENST00000485618 NDOR1Q9UHB4 597 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 PILRAQ9UKJ1 303 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 SNX6Q9UNH7 406 aa7.9□□□□□ -1.14
SF3A1-208ENST00000485618 KIF26BQ2KJY2 2108 aa7.9□□□□□ -1.15
SF3A1-208ENST00000485618 TENM4Q6N022 2769 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 IGKV1-8A0A0C4DH67 115 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 A0A1B0GX78 115 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 A0A1W2PNU3 283 aaPredicted RBP7.89□□□□□ -1.15
SF3A1-208ENST00000485618 A8MT66 165 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 ERVH48-1M5A8F1 160 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 E2F3O00716 465 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 DSCR3O14972 297 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 KLK10O43240 276 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 DLX3O60479 287 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 PLIN3O60664 434 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 CLEC3AO75596 197 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 WFS1O76024 890 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 CHEK2O96017 543 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 KRT6AP02538 564 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 ALBP02768 609 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 PROCP04070 461 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 KRT6BP04259 564 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 ENO1P06733 434 aaKnown RBP7.89□□□□□ -1.15
SF3A1-208ENST00000485618 SERPINA6P08185 405 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 IL10P22301 178 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 PTX3P26022 381 aaPredicted RBP7.89□□□□□ -1.15
SF3A1-208ENST00000485618 PIK3CBP42338 1070 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 SCTRP47872 440 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 KRT6CP48668 564 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 AGTR2P50052 363 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 SLC18A1P54219 525 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 TMPRSS3P57727 454 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 REEP5Q00765 189 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 OCA2Q04671 838 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 CLCQ05315 142 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 ZNF33BQ06732 778 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 LCP2Q13094 533 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms