RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 METTL2BQ6P1Q9 378 aaKnown RBP11.68□□□□□ -0.54
TRA2B-213ENST00000485530 INO80CQ6PI98 192 aaPredicted RBP11.68□□□□□ -0.54
TRA2B-213ENST00000485530 IGF2-ASQ6U949 168 aa11.68□□□□□ -0.54
TRA2B-213ENST00000485530 TIPARPQ7Z3E1 657 aaKnown RBP11.68□□□□□ -0.54
TRA2B-213ENST00000485530 VN1R5Q7Z5H4 357 aa11.68□□□□□ -0.54
TRA2B-213ENST00000485530 ADCK2Q7Z695 626 aa11.68□□□□□ -0.54
TRA2B-213ENST00000485530 TMPRSS11BQ86T26 416 aa11.68□□□□□ -0.54
TRA2B-213ENST00000485530 LSMEM2Q8N112 164 aa11.68□□□□□ -0.54
TRA2B-213ENST00000485530 SHISA5Q8N114 240 aa11.68□□□□□ -0.54
TRA2B-213ENST00000485530 RDH11Q8TC12 318 aa11.68□□□□□ -0.54
TRA2B-213ENST00000485530 TRPC4APQ8TEL6 797 aa11.68□□□□□ -0.54
TRA2B-213ENST00000485530 ZFYVE21Q9BQ24 234 aa11.68□□□□□ -0.54
TRA2B-213ENST00000485530 GATA5Q9BWX5 397 aaPredicted RBP11.68□□□□□ -0.54
TRA2B-213ENST00000485530 DPH1Q9BZG8 443 aa11.68□□□□□ -0.54
TRA2B-213ENST00000485530 AICDAQ9GZX7 198 aa11.68□□□□□ -0.54
TRA2B-213ENST00000485530 PELI2Q9HAT8 420 aa11.68□□□□□ -0.54
TRA2B-213ENST00000485530 MLXIPLQ9NP71 852 aa11.68□□□□□ -0.54
TRA2B-213ENST00000485530 TNFRSF12AQ9NP84 129 aa11.68□□□□□ -0.54
TRA2B-213ENST00000485530 SEMA4BQ9NPR2 832 aaPredicted RBP11.68□□□□□ -0.54
TRA2B-213ENST00000485530 AKAP7Q9P0M2 348 aaPredicted RBP11.68□□□□□ -0.54
TRA2B-213ENST00000485530 PCDHGA4Q9Y5G9 962 aa11.68□□□□□ -0.54
TRA2B-213ENST00000485530 NBPF19A0A087WUL8 3843 aa11.68□□□□□ -0.54
TRA2B-213ENST00000485530 TRBC2A0A5B9 178 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 TMEM120BA0PK00 339 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 TERTO14746 1132 aaKnown RBP11.67□□□□□ -0.54
TRA2B-213ENST00000485530 CLGNO14967 610 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 NVLO15381 856 aaKnown RBP11.67□□□□□ -0.54
TRA2B-213ENST00000485530 OR1F1O43749 312 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 SRPX2O60687 465 aaPredicted RBP11.67□□□□□ -0.54
TRA2B-213ENST00000485530 KATNA1O75449 491 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 SUPT7LO94864 414 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 NTRK1P04629 796 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 EZRP15311 586 aaKnown RBP11.67□□□□□ -0.54
TRA2B-213ENST00000485530 REEP5Q00765 189 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 IRF8Q02556 426 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 CLCQ05315 142 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 HYAL2Q12891 473 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 TRAF3Q13114 568 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 SLBPQ14493 270 aaKnown RBP eCLIP11.67□□□□□ -0.54
TRA2B-213ENST00000485530 TBCCQ15814 346 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 HKDC1Q2TB90 917 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 PRTGQ2VWP7 1150 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 ZC3H12BQ5HYM0 836 aaKnown RBP11.67□□□□□ -0.54
TRA2B-213ENST00000485530 DCAF12Q5T6F0 453 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 LCN10Q6JVE6 187 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 SYVN1Q86TM6 617 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 ZFAND4Q86XD8 727 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 SLC22A9Q8IVM8 553 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 RNF175Q8N4F7 328 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 ZNF655Q8N720 491 aaPredicted RBP11.67□□□□□ -0.54
TRA2B-213ENST00000485530 CCNYL1Q8N7R7 359 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 L3MBTL4Q8NA19 623 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 CCDC63Q8NA47 563 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 MFSD9Q8NBP5 474 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 CREB3L4Q8TEY5 395 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 PTCD3Q96EY7 689 aaKnown RBP11.67□□□□□ -0.54
TRA2B-213ENST00000485530 PKNOX2Q96KN3 472 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 RUFY1Q96T51 708 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 SELENOSQ9BQE4 189 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 NTMT1Q9BV86 223 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 DDA1Q9BW61 102 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 CAPS2Q9BXY5 557 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 EHD1Q9H4M9 534 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 ZNF395Q9H8N7 513 aaPredicted RBP11.67□□□□□ -0.54
TRA2B-213ENST00000485530 THSD1Q9NS62 852 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 SERTAD3Q9UJW9 196 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 RARRES3Q9UL19 164 aa11.67□□□□□ -0.54
TRA2B-213ENST00000485530 MRPS2Q9Y399 296 aaKnown RBP11.67□□□□□ -0.54
TRA2B-213ENST00000485530 FLNCQ14315 2725 aa11.66□□□□□ -0.54
TRA2B-213ENST00000485530 WDR91A4D1P6 747 aa11.66□□□□□ -0.54
TRA2B-213ENST00000485530 FITM1A5D6W6 292 aa11.66□□□□□ -0.54
TRA2B-213ENST00000485530 GOLGA6L10A6NI86 522 aa11.66□□□□□ -0.54
TRA2B-213ENST00000485530 ZNF749O43361 778 aa11.66□□□□□ -0.54
TRA2B-213ENST00000485530 TRIM13O60858 407 aa11.66□□□□□ -0.54
TRA2B-213ENST00000485530 H2AFYO75367 372 aaKnown RBP11.66□□□□□ -0.54
TRA2B-213ENST00000485530 OR2B3O76000 313 aa11.66□□□□□ -0.54
TRA2B-213ENST00000485530 EIF2S1P05198 315 aaKnown RBP11.66□□□□□ -0.54
TRA2B-213ENST00000485530 ITGAXP20702 1163 aa11.66□□□□□ -0.54
TRA2B-213ENST00000485530 SERPINB4P48594 390 aa11.66□□□□□ -0.54
TRA2B-213ENST00000485530 PIK3CGP48736 1102 aa11.66□□□□□ -0.54
TRA2B-213ENST00000485530 SLC18A1P54219 525 aa11.66□□□□□ -0.54
TRA2B-213ENST00000485530 ITGA1P56199 1179 aa11.66□□□□□ -0.54
TRA2B-213ENST00000485530 RPS15AP62244 130 aaKnown RBP11.66□□□□□ -0.54
TRA2B-213ENST00000485530 NFATC3Q12968 1075 aa11.66□□□□□ -0.54
TRA2B-213ENST00000485530 RBBP5Q15291 538 aaKnown RBP11.66□□□□□ -0.54
TRA2B-213ENST00000485530 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.66□□□□□ -0.54
TRA2B-213ENST00000485530 LETMD1Q6P1Q0 360 aa11.66□□□□□ -0.54
TRA2B-213ENST00000485530 TMIGD1Q6UXZ0 262 aa11.66□□□□□ -0.54
TRA2B-213ENST00000485530 ZCCHC23Q6ZST2 131 aa11.66□□□□□ -0.54
TRA2B-213ENST00000485530 BPHLQ86WA6 291 aaPredicted RBP11.66□□□□□ -0.54
TRA2B-213ENST00000485530 PPP1R3BQ86XI6 285 aa11.66□□□□□ -0.54
TRA2B-213ENST00000485530 ANKRD42Q8N9B4 389 aa11.66□□□□□ -0.54
TRA2B-213ENST00000485530 KCT2Q8NC54 265 aa11.66□□□□□ -0.54
TRA2B-213ENST00000485530 OR4F6Q8NGB9 312 aa11.66□□□□□ -0.54
TRA2B-213ENST00000485530 AIF1LQ9BQI0 150 aa11.66□□□□□ -0.54
TRA2B-213ENST00000485530 B3GNT4Q9C0J1 378 aa11.66□□□□□ -0.54
TRA2B-213ENST00000485530 IQCGQ9H095 443 aaKnown RBP11.66□□□□□ -0.54
TRA2B-213ENST00000485530 STMN4Q9H169 189 aaPredicted RBP11.66□□□□□ -0.54
TRA2B-213ENST00000485530 KLHL31Q9H511 634 aa11.66□□□□□ -0.54
TRA2B-213ENST00000485530 NT5DC2Q9H857 520 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms