RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 PCNAP12004 261 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 TAC1P20366 129 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 RORAP35398 523 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 ATP1A2P50993 1020 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 NEK2P51955 445 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 NAGLUP54802 743 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 MAGOHP61326 146 aaKnown RBP11.32□□□□□ -0.6
APTX-227ENST00000485479 RPS15AP62244 130 aaKnown RBP11.32□□□□□ -0.6
APTX-227ENST00000485479 HERVK_113P63132 956 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 MAT1AQ00266 395 aaKnown RBP11.32□□□□□ -0.6
APTX-227ENST00000485479 TNFAIP8L3Q5GJ75 292 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 TCHHL1Q5QJ38 904 aaPredicted RBP11.32□□□□□ -0.6
APTX-227ENST00000485479 TMIGD1Q6UXZ0 262 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 SHISA6Q6ZSJ9 500 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 VN1R5Q7Z5H4 357 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 ASPGQ86U10 573 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 SPACA3Q8IXA5 215 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 ANKRD42Q8N9B4 389 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 ZNF248Q8NDW4 579 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 SNIP1Q8TAD8 396 aaKnown RBP11.32□□□□□ -0.6
APTX-227ENST00000485479 ERVK-6Q9BXR3 956 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 KLHL31Q9H511 634 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 PELI2Q9HAT8 420 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 TMBIM4Q9HC24 238 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 KCNK9Q9NPC2 374 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 LHX9Q9NQ69 397 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 TXLNGQ9NUQ3 528 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 ZNF446Q9NWS9 450 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 ANKMY1Q9P2S6 941 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 COPG2Q9UBF2 871 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 ZNF225Q9UK10 706 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 CROTQ9UKG9 612 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 ZNF490Q9ULM2 529 aaPredicted RBP11.32□□□□□ -0.6
APTX-227ENST00000485479 PCDHB3Q9Y5E6 796 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 TRBC2A0A5B9 178 aa11.31□□□□□ -0.6
APTX-227ENST00000485479 DNAJB6O75190 326 aa11.31□□□□□ -0.6
APTX-227ENST00000485479 WFS1O76024 890 aa11.31□□□□□ -0.6
APTX-227ENST00000485479 CPA3P15088 417 aa11.31□□□□□ -0.6
APTX-227ENST00000485479 SCTRP47872 440 aa11.31□□□□□ -0.6
APTX-227ENST00000485479 CCNG1P51959 295 aa11.31□□□□□ -0.6
APTX-227ENST00000485479 PRKAA2P54646 552 aa11.31□□□□□ -0.6
APTX-227ENST00000485479 RAB8AP61006 207 aa11.31□□□□□ -0.6
APTX-227ENST00000485479 OLR1P78380 273 aa11.31□□□□□ -0.6
APTX-227ENST00000485479 TRAF3Q13114 568 aa11.31□□□□□ -0.6
APTX-227ENST00000485479 GRM7Q14831 915 aa11.31□□□□□ -0.6
APTX-227ENST00000485479 ST3GAL2Q16842 350 aa11.31□□□□□ -0.6
APTX-227ENST00000485479 PRTGQ2VWP7 1150 aa11.31□□□□□ -0.6
APTX-227ENST00000485479 CCDC153Q494R4 210 aa11.31□□□□□ -0.6
APTX-227ENST00000485479 ATP1A1-AS1Q5TC04 95 aa11.31□□□□□ -0.6
APTX-227ENST00000485479 LETMD1Q6P1Q0 360 aa11.31□□□□□ -0.6
APTX-227ENST00000485479 PRSS58Q8IYP2 241 aa11.31□□□□□ -0.6
APTX-227ENST00000485479 DSELQ8IZU8 1212 aa11.31□□□□□ -0.6
APTX-227ENST00000485479 MFSD9Q8NBP5 474 aa11.31□□□□□ -0.6
APTX-227ENST00000485479 MGARPQ8TDB4 240 aa11.31□□□□□ -0.6
APTX-227ENST00000485479 PPP4R1Q8TF05 950 aa11.31□□□□□ -0.6
APTX-227ENST00000485479 CT55Q8WUE5 264 aa11.31□□□□□ -0.6
APTX-227ENST00000485479 PTCD3Q96EY7 689 aaKnown RBP11.31□□□□□ -0.6
APTX-227ENST00000485479 PGM2Q96G03 612 aa11.31□□□□□ -0.6
APTX-227ENST00000485479 ZNF285Q96NJ3 590 aa11.31□□□□□ -0.6
APTX-227ENST00000485479 GBP5Q96PP8 586 aa11.31□□□□□ -0.6
APTX-227ENST00000485479 KCNA7Q96RP8 456 aa11.31□□□□□ -0.6
APTX-227ENST00000485479 MTERF1Q99551 399 aaKnown RBP11.31□□□□□ -0.6
APTX-227ENST00000485479 ZPBPQ9BS86 351 aa11.31□□□□□ -0.6
APTX-227ENST00000485479 CPNE5Q9HCH3 593 aa11.31□□□□□ -0.6
APTX-227ENST00000485479 TNFRSF12AQ9NP84 129 aa11.31□□□□□ -0.6
APTX-227ENST00000485479 TNPO3Q9Y5L0 923 aaKnown RBP11.31□□□□□ -0.6
APTX-227ENST00000485479 EFSO43281 561 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 SRPX2O60687 465 aaPredicted RBP11.3□□□□□ -0.6
APTX-227ENST00000485479 TBX6O95947 436 aaPredicted RBP11.3□□□□□ -0.6
APTX-227ENST00000485479 LIFP15018 202 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 TCN2P20062 427 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 ALDH3A1P30838 453 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 HNRNPH1P31943 449 aaKnown RBP11.3□□□□□ -0.6
APTX-227ENST00000485479 DLSTP36957 453 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 GCGRP47871 477 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 CLCQ05315 142 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 NAA25Q14CX7 972 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 TTMPQ5BVD1 217 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 TCTE1Q5JU00 501 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 MLIPQ5VWP3 458 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 ZNF385CQ66K41 422 aaPredicted RBP11.3□□□□□ -0.6
APTX-227ENST00000485479 RHBDD2Q6NTF9 364 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 TLDC1Q6P9B6 456 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 CYB5D1Q6P9G0 228 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 LCA5Q86VQ0 697 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 PDSS2Q86YH6 399 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 ARHGEF39Q8N4T4 335 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 TTC29Q8NA56 475 aaPredicted RBP11.3□□□□□ -0.6
APTX-227ENST00000485479 OR4F6Q8NGB9 312 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 OR9A4Q8NGU2 314 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 OR8K5Q8NH50 307 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 ZNF483Q8TF39 744 aaPredicted RBP11.3□□□□□ -0.6
APTX-227ENST00000485479 MESP1Q9BRJ9 268 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 RBCK1Q9BYM8 510 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 SLC22A11Q9NSA0 550 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 FARSBQ9NSD9 589 aaKnown RBP11.3□□□□□ -0.6
APTX-227ENST00000485479 MKS1Q9NXB0 559 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 GPRC5BQ9NZH0 403 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 DKK4Q9UBT3 224 aa11.3□□□□□ -0.6
APTX-227ENST00000485479 CTSFQ9UBX1 484 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms