RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 NDOR1Q9UHB4 597 aa16.92■□□□□ 0.3
SREBF1-213ENST00000485080 GPN3Q9UHW5 284 aaPredicted RBP16.92■□□□□ 0.3
SREBF1-213ENST00000485080 NXT1Q9UKK6 140 aaKnown RBP16.92■□□□□ 0.3
SREBF1-213ENST00000485080 TNPO3Q9Y5L0 923 aaKnown RBP16.92■□□□□ 0.3
SREBF1-213ENST00000485080 SLC22A7Q9Y694 548 aa16.92■□□□□ 0.3
SREBF1-213ENST00000485080 VSTM2BA6NLU5 285 aa16.91■□□□□ 0.3
SREBF1-213ENST00000485080 H0YIG0 161 aa16.91■□□□□ 0.3
SREBF1-213ENST00000485080 CLGNO14967 610 aa16.91■□□□□ 0.3
SREBF1-213ENST00000485080 PRPF4O43172 522 aaKnown RBP eCLIP16.91■□□□□ 0.32e-6■■■□□ 17.8
SREBF1-213ENST00000485080 FOXS1O43638 330 aa16.91■□□□□ 0.3
SREBF1-213ENST00000485080 OR1F1O43749 312 aa16.91■□□□□ 0.3
SREBF1-213ENST00000485080 CDH16O75309 829 aa16.91■□□□□ 0.3
SREBF1-213ENST00000485080 WFS1O76024 890 aa16.91■□□□□ 0.3
SREBF1-213ENST00000485080 SLC35G6P0C7Q6 338 aa16.91■□□□□ 0.3
SREBF1-213ENST00000485080 AGTR2P50052 363 aa16.91■□□□□ 0.3
SREBF1-213ENST00000485080 CYP4F2P78329 520 aa16.91■□□□□ 0.3
SREBF1-213ENST00000485080 NFKB2Q00653 900 aa16.91■□□□□ 0.3
SREBF1-213ENST00000485080 MLIPQ5VWP3 458 aa16.91■□□□□ 0.3
SREBF1-213ENST00000485080 SH2D5Q6ZV89 423 aa16.91■□□□□ 0.3
SREBF1-213ENST00000485080 AFAP1L2Q8N4X5 818 aa16.91■□□□□ 0.3
SREBF1-213ENST00000485080 TRPV3Q8NET8 790 aa16.91■□□□□ 0.3
SREBF1-213ENST00000485080 OR2Y1Q8NGV0 311 aa16.91■□□□□ 0.3
SREBF1-213ENST00000485080 EXT2Q93063 718 aa16.91■□□□□ 0.3
SREBF1-213ENST00000485080 ESAMQ96AP7 390 aa16.91■□□□□ 0.3
SREBF1-213ENST00000485080 EFCAB11Q9BUY7 163 aa16.91■□□□□ 0.3
SREBF1-213ENST00000485080 MRPL46Q9H2W6 279 aaKnown RBP16.91■□□□□ 0.3
SREBF1-213ENST00000485080 OPTCQ9UBM4 332 aa16.91■□□□□ 0.3
SREBF1-213ENST00000485080 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.91■□□□□ 0.3
SREBF1-213ENST00000485080 ASB1Q9Y576 335 aa16.91■□□□□ 0.3
SREBF1-213ENST00000485080 V9GYY5 206 aaPredicted RBP16.91■□□□□ 0.3
SREBF1-213ENST00000485080 CFAP46Q8IYW2 2715 aa16.91■□□□□ 0.3
SREBF1-213ENST00000485080 CCDC88CQ9P219 2028 aa16.91■□□□□ 0.3
SREBF1-213ENST00000485080 STX16-NPEPL1H3BU86 382 aa16.9■□□□□ 0.3
SREBF1-213ENST00000485080 STX16O14662 325 aa16.9■□□□□ 0.3
SREBF1-213ENST00000485080 PRAMEF4O60810 478 aa16.9■□□□□ 0.3
SREBF1-213ENST00000485080 CNOT3O75175 753 aaKnown RBP16.9■□□□□ 0.3
SREBF1-213ENST00000485080 NSA2O95478 260 aaKnown RBP16.9■□□□□ 0.3
SREBF1-213ENST00000485080 GSTA1P08263 222 aa16.9■□□□□ 0.3
SREBF1-213ENST00000485080 GFAPP14136 432 aa16.9■□□□□ 0.3
SREBF1-213ENST00000485080 VARSP26640 1264 aaKnown RBP16.9■□□□□ 0.3
SREBF1-213ENST00000485080 OR1D4P47884 311 aa16.9■□□□□ 0.3
SREBF1-213ENST00000485080 RPS18P62269 152 aaKnown RBP16.9■□□□□ 0.3
SREBF1-213ENST00000485080 MEF2AQ02078 507 aaPredicted RBP16.9■□□□□ 0.3
SREBF1-213ENST00000485080 LAPTM5Q13571 262 aa16.9■□□□□ 0.3
SREBF1-213ENST00000485080 ERV3-1Q14264 604 aa16.9■□□□□ 0.3
SREBF1-213ENST00000485080 SSPNQ14714 243 aa16.9■□□□□ 0.3
SREBF1-213ENST00000485080 TBR1Q16650 682 aa16.9■□□□□ 0.3
SREBF1-213ENST00000485080 PFKFB4Q16877 469 aa16.9■□□□□ 0.3
SREBF1-213ENST00000485080 PRAMEF9Q5VWM5 478 aa16.9■□□□□ 0.3
SREBF1-213ENST00000485080 NIPAL1Q6NVV3 410 aa16.9■□□□□ 0.3
SREBF1-213ENST00000485080 TMIGD1Q6UXZ0 262 aa16.9■□□□□ 0.3
SREBF1-213ENST00000485080 KRT78Q8N1N4 520 aa16.9■□□□□ 0.3
SREBF1-213ENST00000485080 RIBC1Q8N443 379 aaPredicted RBP16.9■□□□□ 0.3
SREBF1-213ENST00000485080 ANKRD53Q8N9V6 530 aa16.9■□□□□ 0.3
SREBF1-213ENST00000485080 CREB3L4Q8TEY5 395 aa16.9■□□□□ 0.3
SREBF1-213ENST00000485080 PTCD3Q96EY7 689 aaKnown RBP16.9■□□□□ 0.3
SREBF1-213ENST00000485080 IP6K3Q96PC2 410 aa16.9■□□□□ 0.3
SREBF1-213ENST00000485080 RHBGQ9H310 441 aa16.9■□□□□ 0.3
SREBF1-213ENST00000485080 XPR1Q9UBH6 696 aa16.9■□□□□ 0.3
SREBF1-213ENST00000485080 POLHQ9Y253 713 aa16.9■□□□□ 0.3
SREBF1-213ENST00000485080 COL6A6A6NMZ7 2263 aa16.9■□□□□ 0.3
SREBF1-213ENST00000485080 CCNT2O60583 730 aaKnown RBP16.89■□□□□ 0.29
SREBF1-213ENST00000485080 SERPINA6P08185 405 aa16.89■□□□□ 0.29
SREBF1-213ENST00000485080 FURINP09958 794 aa16.89■□□□□ 0.29
SREBF1-213ENST00000485080 PRKAR1AP10644 381 aa16.89■□□□□ 0.29
SREBF1-213ENST00000485080 EPB42P16452 691 aa16.89■□□□□ 0.29
SREBF1-213ENST00000485080 PIK3CGP48736 1102 aa16.89■□□□□ 0.29
SREBF1-213ENST00000485080 RGS1Q08116 209 aa16.89■□□□□ 0.29
SREBF1-213ENST00000485080 IL10RAQ13651 578 aa16.89■□□□□ 0.29
SREBF1-213ENST00000485080 DOC2AQ14183 400 aa16.89■□□□□ 0.29
SREBF1-213ENST00000485080 SLBPQ14493 270 aaKnown RBP eCLIP16.89■□□□□ 0.29
SREBF1-213ENST00000485080 HERC3Q15034 1050 aa16.89■□□□□ 0.29
SREBF1-213ENST00000485080 NKG7Q16617 165 aa16.89■□□□□ 0.29
SREBF1-213ENST00000485080 FBXO48Q5FWF7 155 aa16.89■□□□□ 0.29
SREBF1-213ENST00000485080 PAGE2BQ5JRK9 111 aa16.89■□□□□ 0.29
SREBF1-213ENST00000485080 C16orf46Q6P387 395 aa16.89■□□□□ 0.29
SREBF1-213ENST00000485080 BORAQ6PGQ7 559 aa16.89■□□□□ 0.29
SREBF1-213ENST00000485080 PCSK4Q6UW60 755 aa16.89■□□□□ 0.29
SREBF1-213ENST00000485080 SNX31Q8N9S9 440 aa16.89■□□□□ 0.29
SREBF1-213ENST00000485080 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.89■□□□□ 0.29
SREBF1-213ENST00000485080 SPSB2Q99619 263 aa16.89■□□□□ 0.29
SREBF1-213ENST00000485080 ROPN1BQ9BZX4 212 aaPredicted RBP16.89■□□□□ 0.29
SREBF1-213ENST00000485080 TGIF2Q9GZN2 237 aa16.89■□□□□ 0.29
SREBF1-213ENST00000485080 SLC6A16Q9GZN6 736 aa16.89■□□□□ 0.29
SREBF1-213ENST00000485080 ROPN1Q9HAT0 212 aaPredicted RBP16.89■□□□□ 0.29
SREBF1-213ENST00000485080 CLK4Q9HAZ1 481 aaKnown RBP16.89■□□□□ 0.29
SREBF1-213ENST00000485080 DCDC2Q9UHG0 476 aa16.89■□□□□ 0.29
SREBF1-213ENST00000485080 MAP4K5Q9Y4K4 846 aa16.89■□□□□ 0.29
SREBF1-213ENST00000485080 TK2O00142 265 aa16.88■□□□□ 0.29
SREBF1-213ENST00000485080 ATXN7O15265 892 aaPredicted RBP16.88■□□□□ 0.29
SREBF1-213ENST00000485080 NDUFS4O43181 175 aa16.88■□□□□ 0.29
SREBF1-213ENST00000485080 UGDHO60701 494 aa16.88■□□□□ 0.29
SREBF1-213ENST00000485080 SMIM24O75264 130 aa16.88■□□□□ 0.29
SREBF1-213ENST00000485080 UMODP07911 640 aa16.88■□□□□ 0.29
SREBF1-213ENST00000485080 SBK3P0C264 359 aa16.88■□□□□ 0.29
SREBF1-213ENST00000485080 PYGBP11216 843 aa16.88■□□□□ 0.29
SREBF1-213ENST00000485080 FBLP22087 321 aaKnown RBP16.88■□□□□ 0.29
SREBF1-213ENST00000485080 FOLR3P41439 243 aa16.88■□□□□ 0.29
SREBF1-213ENST00000485080 AVPR1BP47901 424 aa16.88■□□□□ 0.29
SREBF1-213ENST00000485080 IRF8Q02556 426 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms