RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 OR56A3Q8NH54 315 aa10.81□□□□□ -0.68
SCFD1-206ENST00000484733 SLC13A3Q8WWT9 602 aa10.81□□□□□ -0.68
SCFD1-206ENST00000484733 NDNQ99608 321 aa10.81□□□□□ -0.68
SCFD1-206ENST00000484733 CLK4Q9HAZ1 481 aaKnown RBP10.81□□□□□ -0.68
SCFD1-206ENST00000484733 MMP25Q9NPA2 562 aa10.81□□□□□ -0.68
SCFD1-206ENST00000484733 UNC79Q9P2D8 2635 aa10.81□□□□□ -0.68
SCFD1-206ENST00000484733 FEZF1A0PJY2 475 aa10.81□□□□□ -0.68
SCFD1-206ENST00000484733 SGK494L7N484 410 aa10.81□□□□□ -0.68
SCFD1-206ENST00000484733 SEC24DO94855 1032 aaPredicted RBP10.81□□□□□ -0.68
SCFD1-206ENST00000484733 TSPAN12O95859 305 aa10.81□□□□□ -0.68
SCFD1-206ENST00000484733 AHSGP02765 367 aa10.81□□□□□ -0.68
SCFD1-206ENST00000484733 UQCRHP07919 91 aa10.81□□□□□ -0.68
SCFD1-206ENST00000484733 ENO2P09104 434 aaPredicted RBP10.81□□□□□ -0.68
SCFD1-206ENST00000484733 HIST1H2AGP0C0S8 130 aaPredicted RBP10.81□□□□□ -0.68
SCFD1-206ENST00000484733 IL1RNP18510 177 aa10.81□□□□□ -0.68
SCFD1-206ENST00000484733 HIST1H2ADP20671 130 aa10.81□□□□□ -0.68
SCFD1-206ENST00000484733 CDKN2DP55273 166 aa10.81□□□□□ -0.68
SCFD1-206ENST00000484733 RHAGQ02094 409 aa10.81□□□□□ -0.68
SCFD1-206ENST00000484733 PWP1Q13610 501 aa10.81□□□□□ -0.68
SCFD1-206ENST00000484733 HERC3Q15034 1050 aa10.81□□□□□ -0.68
SCFD1-206ENST00000484733 RBM20Q5T481 1227 aaKnown RBP10.81□□□□□ -0.68
SCFD1-206ENST00000484733 LANCL3Q6ZV70 420 aa10.81□□□□□ -0.68
SCFD1-206ENST00000484733 PDSS2Q86YH6 399 aa10.81□□□□□ -0.68
SCFD1-206ENST00000484733 FBXL8Q96CD0 374 aa10.81□□□□□ -0.68
SCFD1-206ENST00000484733 PDLIM5Q96HC4 596 aaKnown RBP10.81□□□□□ -0.68
SCFD1-206ENST00000484733 HIST1H2AHQ96KK5 128 aa10.81□□□□□ -0.68
SCFD1-206ENST00000484733 HIST1H2AJQ99878 128 aa10.81□□□□□ -0.68
SCFD1-206ENST00000484733 H2AFJQ9BTM1 129 aa10.81□□□□□ -0.68
SCFD1-206ENST00000484733 ATG10Q9H0Y0 220 aa10.81□□□□□ -0.68
SCFD1-206ENST00000484733 HCN3Q9P1Z3 774 aa10.81□□□□□ -0.68
SCFD1-206ENST00000484733 TRBC2A0A5B9 178 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 ZG16O60844 167 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 STATHP02808 62 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 SLC35G6P0C7Q6 338 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 CDH1P12830 882 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 MST1P26927 711 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 CCR8P51685 355 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 KCNK10P57789 538 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 ZNF33BQ06732 778 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 ART3Q13508 389 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 FRG1Q14331 258 aaKnown RBP10.8□□□□□ -0.68
SCFD1-206ENST00000484733 PPP1R7Q15435 360 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 PHKG1Q16816 387 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 MEP1AQ16819 746 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 BTBD16Q32M84 506 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 MINDY4Q4G0A6 757 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 GFRALQ6UXV0 394 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 MBOAT1Q6ZNC8 495 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 LGI4Q8N135 537 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 KCT2Q8NC54 265 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 NT5CQ8TCD5 201 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 ATL1Q8WXF7 558 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 LINGO1Q96FE5 620 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 CERS2Q96G23 380 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 LANCL2Q9NS86 450 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 SCN2AQ99250 2005 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 IGHV3-20A0A0C4DH32 117 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 MAGEB17A8MXT2 336 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 HNRNPRO43390 633 aaKnown RBP10.8□□□□□ -0.68
SCFD1-206ENST00000484733 IL2P60568 153 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 ZXDCQ2QGD7 858 aaPredicted RBP10.8□□□□□ -0.68
SCFD1-206ENST00000484733 MSS51Q4VC12 460 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 ZNF766Q5HY98 468 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 ACER2Q5QJU3 275 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 TEDDM1Q5T9Z0 273 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 SP5Q6BEB4 398 aaPredicted RBP10.8□□□□□ -0.68
SCFD1-206ENST00000484733 MTFR2Q6P444 385 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 FJX1Q86VR8 437 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 SLC35F6Q8N357 371 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 TBC1D19Q8N5T2 526 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 MDS2Q8NDY4 140 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 SCMH1Q96GD3 660 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 MACROD1Q9BQ69 325 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 TRIM54Q9BYV2 358 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 KCNK13Q9HB14 408 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 SEC14L3Q9UDX4 400 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 SNX12Q9UMY4 172 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 NAALAD2Q9Y3Q0 740 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 KLF2Q9Y5W3 355 aaPredicted RBP10.8□□□□□ -0.68
SCFD1-206ENST00000484733 ZGRF1Q86YA3 2104 aa10.8□□□□□ -0.68
SCFD1-206ENST00000484733 ENO4A6NNW6 628 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 GALR3O60755 368 aaPredicted RBP10.79□□□□□ -0.68
SCFD1-206ENST00000484733 RDH16O75452 317 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 IVDP26440 423 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 CA7P43166 264 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 SKP1P63208 163 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 RBPJQ06330 500 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 TUBA3CQ13748 450 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 MFSD4BQ5TF39 518 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 FAM45BPQ6NSW5 357 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 TUBA3EQ6PEY2 450 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 SHISA5Q8N114 240 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 ZCCHC10Q8TBK6 192 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 FAM45AQ8TCE6 357 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 LRRC39Q96DD0 335 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 SNF8Q96H20 258 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 PLAC1Q9HBJ0 212 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 COPG2Q9UBF2 871 aa10.79□□□□□ -0.68
SCFD1-206ENST00000484733 SUCOQ9UBS9 1254 aaKnown RBP10.79□□□□□ -0.68
SCFD1-206ENST00000484733 VWA7Q9Y334 891 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms