RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 ALKBH7Q9BT30 221 aaPredicted RBP4.14□□□□□ -1.75
VPS13A-211ENST00000484581 URM1Q9BTM9 101 aaKnown RBP4.14□□□□□ -1.75
VPS13A-211ENST00000484581 NACAP1Q9BZK3 213 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 LAT2Q9GZY6 243 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 IL25Q9H293 177 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 RIMS4Q9H426 269 aaPredicted RBP4.14□□□□□ -1.75
VPS13A-211ENST00000484581 GAREM1Q9H706 876 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 A4GALTQ9NPC4 353 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 CHST11Q9NPF2 352 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 FAM207AQ9NSI2 230 aaPredicted RBP4.14□□□□□ -1.75
VPS13A-211ENST00000484581 SLC35D1Q9NTN3 355 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 SOHLH2Q9NX45 425 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 DONSONQ9NYP3 566 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 PCDHA7Q9UN72 937 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 MACROD2A1Z1Q3 448 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 HNRNPCL2B2RXH8 293 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 H3BNX3 289 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 CCL24O00175 119 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 SLC28A2O43868 658 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 XPNPEP2O43895 674 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 ACSL4O60488 711 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 ATP6V1G1O75348 118 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 OR6B1O95007 311 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 AKR7A3O95154 331 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 OAZ2O95190 189 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 PTBP3O95758 552 aaKnown RBP4.13□□□□□ -1.75
VPS13A-211ENST00000484581 KRT5P13647 590 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 DAOP14920 347 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 CA4P22748 312 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 ADSSP30520 456 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 MAZP56270 477 aaKnown RBP4.13□□□□□ -1.75
VPS13A-211ENST00000484581 CLDN17P56750 224 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 B3GALT5-AS1P59052 145 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 ABRQ12979 859 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 GAGE5Q13069 117 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 GAGE6Q13070 117 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 SNTA1Q13424 505 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 KARSQ15046 597 aaKnown RBP4.13□□□□□ -1.75
VPS13A-211ENST00000484581 ANKDD1AQ495B1 522 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 ARMCX4Q5H9R4 360 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 SLC35D3Q5M8T2 416 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 STXBP5Q5T5C0 1151 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 RAET1GQ6H3X3 334 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 MEX3BQ6ZN04 569 aaKnown RBP4.13□□□□□ -1.75
VPS13A-211ENST00000484581 MACC1Q6ZN28 852 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 MARK2Q7KZI7 788 aaKnown RBP4.13□□□□□ -1.75
VPS13A-211ENST00000484581 PPP1R42Q7Z4L9 355 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 RTN4RL2Q86UN3 420 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 PLD3Q8IV08 490 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 STHQ8IWL8 128 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 THEM5Q8N1Q8 247 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 FBXW8Q8N3Y1 598 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 ZNF473Q8WTR7 871 aaKnown RBP4.13□□□□□ -1.75
VPS13A-211ENST00000484581 WBP2Q969T9 261 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 ULK4Q96C45 1275 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 PHF21BQ96EK2 531 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 SLC47A1Q96FL8 570 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 VPS39Q96JC1 886 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 ADGRG7Q96K78 797 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 MARK4Q96L34 752 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 CTAGE1Q96RT6 745 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 TRMT61BQ9BVS5 477 aaKnown RBP4.13□□□□□ -1.75
VPS13A-211ENST00000484581 WWTR1Q9GZV5 400 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 RAB17Q9H0T7 212 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 ATG10Q9H0Y0 220 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 RWDD1Q9H446 243 aaPredicted RBP4.13□□□□□ -1.75
VPS13A-211ENST00000484581 RNF121Q9H920 327 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 RPF1Q9H9Y2 349 aaKnown RBP4.13□□□□□ -1.75
VPS13A-211ENST00000484581 CGNQ9P2M7 1197 aaKnown RBP4.13□□□□□ -1.75
VPS13A-211ENST00000484581 XPO7Q9UIA9 1087 aaKnown RBP4.13□□□□□ -1.75
VPS13A-211ENST00000484581 SH3GLB1Q9Y371 365 aa4.13□□□□□ -1.75
VPS13A-211ENST00000484581 LOC101059948A0A1B0GTJ6 334 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 ANTXRLA6NF34 631 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 CD8B2A6NJW9 211 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 E5RGE8 158 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 PSMD3O43242 534 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 CTSVO60911 334 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 PRKRAO75569 313 aaKnown RBP4.12□□□□□ -1.75
VPS13A-211ENST00000484581 GRAP2O75791 330 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 PIGNO95427 931 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 IGHV4-39P01824 125 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 IGHV4-31P0DP07 118 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 FCGR1AP12314 374 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 F3P13726 295 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 CDC25AP30304 524 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 CSTF2P33240 577 aaKnown RBP eCLIP4.12□□□□□ -1.75
VPS13A-211ENST00000484581 DUTP33316 252 aaKnown RBP4.12□□□□□ -1.75
VPS13A-211ENST00000484581 MDH1P40925 334 aaKnown RBP4.12□□□□□ -1.75
VPS13A-211ENST00000484581 TNFSF10P50591 281 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 FUT6P51993 359 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 LGALS3BPQ08380 585 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 ZBTB17Q13105 803 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 TAF1BQ53T94 588 aaPredicted RBP4.12□□□□□ -1.75
VPS13A-211ENST00000484581 HERC4Q5GLZ8 1057 aaPredicted RBP4.12□□□□□ -1.75
VPS13A-211ENST00000484581 SIRPB2Q5JXA9 342 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 IRAK1BP1Q5VVH5 260 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 IRGCQ6NXR0 463 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 TBC1D21Q8IYX1 336 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 KLHDC1Q8N7A1 406 aa4.12□□□□□ -1.75
VPS13A-211ENST00000484581 TMEM99Q8N816 258 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms