RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 CPOXP36551 454 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 FOXA1P55317 472 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 GFERP55789 205 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 ERVPABLB-1P60509 514 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 ERVK-8P63133 956 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 E2F1Q01094 437 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 HHEXQ03014 270 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 TBL3Q12788 808 aaKnown RBP6.68□□□□□ -1.34
BRCA1-216ENST00000484087 BIRC2Q13490 618 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 CLCA4Q14CN2 919 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 PHKG1Q16816 387 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 BCL7AQ4VC05 210 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 PHF19Q5T6S3 580 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 OGFOD2Q6N063 350 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 BNC2Q6ZN30 1099 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-216ENST00000484087 LRRTM4Q86VH4 590 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 C17orf82Q86X59 251 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-216ENST00000484087 MYLK4Q86YV6 388 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-216ENST00000484087 DSELQ8IZU8 1212 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 PGAM4Q8N0Y7 254 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 FBXW8Q8N3Y1 598 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 SFRP1Q8N474 314 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 SNX31Q8N9S9 440 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 OR4F6Q8NGB9 312 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 OR52B6Q8NGF0 335 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 JADE3Q92613 823 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 RCN3Q96D15 328 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 CCDC74BQ96LY2 380 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 PPP3R2Q96LZ3 170 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 CCDC138Q96M89 665 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 KCNA7Q96RP8 456 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 NTMT1Q9BV86 223 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 ACTR8Q9H981 624 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 ASCL3Q9NQ33 180 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 TMEM45AQ9NWC5 275 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 CCDC167Q9P0B6 97 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 ZNF624Q9P2J8 865 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-216ENST00000484087 PISDQ9UG56 409 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 PDE10AQ9Y233 779 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.68□□□□□ -1.34
BRCA1-216ENST00000484087 SPENQ96T58 3664 aaKnown RBP6.68□□□□□ -1.34
BRCA1-216ENST00000484087 IGHV1OR21-1A0A087WYE8 117 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 C17orf113A0A1B0GUU1 675 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 DYTNA2CJ06 578 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 KLHL33A6NCF5 533 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 OR7A17O14581 309 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 CFLARO15519 480 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 TAPBPO15533 448 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 NUDT21O43809 227 aaKnown RBP6.67□□□□□ -1.34
BRCA1-216ENST00000484087 NRP2O60462 931 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 PEX11AO75192 247 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 FKBP6O75344 327 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 ENTPD5O75356 428 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 MATN4O95460 622 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 F3P13726 295 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 TYRP1P17643 537 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 CD1CP29017 333 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 PRDX3P30048 256 aaKnown RBP6.67□□□□□ -1.34
BRCA1-216ENST00000484087 MMP16P51512 607 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 MAPK10P53779 464 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 KCNK10P57789 538 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 AP2B1P63010 937 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 ABRQ12979 859 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 KPNB1Q14974 876 aaKnown RBP6.67□□□□□ -1.34
BRCA1-216ENST00000484087 RTP5Q14D33 572 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 TGIF1Q15583 401 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 SMU1Q2TAY7 513 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 LETMD1Q6P1Q0 360 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 PRMT9Q6P2P2 845 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 GK5Q6ZS86 529 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 RNF165Q6ZSG1 346 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 ZNF438Q7Z4V0 828 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 SLITRK4Q8IW52 837 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 CFAP206Q8IYR0 622 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 SLC22A15Q8IZD6 547 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 FAM9CQ8IZT9 166 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 FNDC5Q8NAU1 212 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 FBXO27Q8NI29 283 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 HM13Q8TCT9 377 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 TSPEARQ8WU66 669 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 RSC1A1Q92681 617 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 FBXL8Q96CD0 374 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 C3orf30Q96M34 536 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 CDK15Q96Q40 435 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 TMEM79Q9BSE2 394 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 TUBB1Q9H4B7 451 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 ELOVL6Q9H5J4 265 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 WDR41Q9HAD4 459 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 RNPEPL1Q9HAU8 725 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 DNAJC11Q9NVH1 559 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 GID8Q9NWU2 228 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 NOP53Q9NZM5 478 aaKnown RBP6.67□□□□□ -1.34
BRCA1-216ENST00000484087 FOXJ2Q9P0K8 574 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 STOML1Q9UBI4 398 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 SLC7A8Q9UHI5 535 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 SNX6Q9UNH7 406 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 EIF3LQ9Y262 564 aaKnown RBP6.67□□□□□ -1.34
BRCA1-216ENST00000484087 NDUFAF1Q9Y375 327 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 LOXL2Q9Y4K0 774 aa6.67□□□□□ -1.34
BRCA1-216ENST00000484087 IGSF10Q6WRI0 2623 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms