RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 OR2A25A4D2G3 310 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 MYL12BO14950 172 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 ARHGEF9O43307 516 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 PRPS1L1P21108 318 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 HMGCLP35914 325 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 SPAM1P38567 509 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 STK19P49842 368 aaPredicted RBP12.28□□□□□ -0.44
VPS52-218ENST00000482399 TUBA1BP68363 451 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 ARF5P84085 180 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 GPR162Q16538 588 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 ZNF544Q6NX49 715 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 CASP12Q6UXS9 341 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 TUBA1AQ71U36 451 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 VASH1Q7L8A9 365 aaPredicted RBP12.28□□□□□ -0.44
VPS52-218ENST00000482399 MEX3DQ86XN8 651 aaKnown RBP12.28□□□□□ -0.44
VPS52-218ENST00000482399 MMAAQ8IVH4 418 aaKnown RBP12.28□□□□□ -0.44
VPS52-218ENST00000482399 ARL14EPQ8N8R7 260 aaPredicted RBP12.28□□□□□ -0.44
VPS52-218ENST00000482399 PHF21AQ96BD5 680 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 UROC1Q96N76 676 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 MIEF1Q9NQG6 463 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 COMMD3Q9UBI1 195 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 IFT52Q9Y366 437 aa12.28□□□□□ -0.44
VPS52-218ENST00000482399 DRGXA6NNA5 263 aa12.27□□□□□ -0.44
VPS52-218ENST00000482399 ADAM12O43184 909 aa12.27□□□□□ -0.44
VPS52-218ENST00000482399 WBP4O75554 376 aaKnown RBP12.27□□□□□ -0.44
VPS52-218ENST00000482399 DNAJB5O75953 348 aa12.27□□□□□ -0.44
VPS52-218ENST00000482399 ELNP15502 786 aa12.27□□□□□ -0.44
VPS52-218ENST00000482399 CLCN4P51793 760 aa12.27□□□□□ -0.44
VPS52-218ENST00000482399 ZNF181Q2M3W8 571 aa12.27□□□□□ -0.44
VPS52-218ENST00000482399 ATP13A5Q4VNC0 1218 aa12.27□□□□□ -0.44
VPS52-218ENST00000482399 ZMAT1Q5H9K5 638 aa12.27□□□□□ -0.44
VPS52-218ENST00000482399 LIPKQ5VXJ0 399 aa12.27□□□□□ -0.44
VPS52-218ENST00000482399 NXNL2Q5VZ03 156 aa12.27□□□□□ -0.44
VPS52-218ENST00000482399 KDM4DQ6B0I6 523 aa12.27□□□□□ -0.44
VPS52-218ENST00000482399 SYCE2Q6PIF2 218 aa12.27□□□□□ -0.44
VPS52-218ENST00000482399 FAM9CQ8IZT9 166 aa12.27□□□□□ -0.44
VPS52-218ENST00000482399 B3GNT7Q8NFL0 401 aa12.27□□□□□ -0.44
VPS52-218ENST00000482399 WBP2Q969T9 261 aa12.27□□□□□ -0.44
VPS52-218ENST00000482399 EID2BQ96D98 161 aa12.27□□□□□ -0.44
VPS52-218ENST00000482399 OR6C70A6NIJ9 312 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 METTL15A6NJ78 407 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 CLCA1A8K7I4 914 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 PSIP1O75475 530 aaKnown RBP12.27□□□□□ -0.45
VPS52-218ENST00000482399 GADD45GO95257 159 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 KCNK5O95279 499 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 PREPP48147 710 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 RGS6P49758 472 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 PRKAG1P54619 331 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 NFE2L1Q14494 772 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 TIMM50Q3ZCQ8 353 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 ADGRF1Q5T601 910 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 CD300LGQ6UXG3 332 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 ZSWIM9Q86XI8 627 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 BBS7Q8IWZ6 715 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 KLHDC8BQ8IXV7 354 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 APCDD1Q8J025 514 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 ASCC1Q8N9N2 400 aaKnown RBP12.27□□□□□ -0.45
VPS52-218ENST00000482399 GPR151Q8TDV0 419 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 COL21A1Q96P44 957 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 FAM129BQ96TA1 746 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 EMILIN2Q9BXX0 1053 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 MAGIXQ9H6Y5 334 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 FBXO8Q9NRD0 319 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 QPCTLQ9NXS2 382 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 SLC6A14Q9UN76 642 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 N6AMT1Q9Y5N5 214 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 LYVE1Q9Y5Y7 322 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 SIP14410 1827 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 ADORA3P0DMS8 318 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 ITGAMP11215 1152 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 GJA1P17302 382 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 PSMA1P25786 263 aaKnown RBP12.27□□□□□ -0.45
VPS52-218ENST00000482399 PIK3CBP42338 1070 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 RECQLP46063 649 aaPredicted RBP12.27□□□□□ -0.45
VPS52-218ENST00000482399 NDUFA5Q16718 116 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 FUT10Q6P4F1 479 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 KLHL17Q6TDP4 642 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 RSPO2Q6UXX9 243 aaPredicted RBP12.27□□□□□ -0.45
VPS52-218ENST00000482399 SLC24A5Q71RS6 500 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 CCDC71Q8IV32 467 aaPredicted RBP12.27□□□□□ -0.45
VPS52-218ENST00000482399 CELF5Q8N6W0 485 aaKnown RBP12.27□□□□□ -0.45
VPS52-218ENST00000482399 HJURPQ8NCD3 748 aaPredicted RBP12.27□□□□□ -0.45
VPS52-218ENST00000482399 CTRCQ99895 268 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 IRF2BPLQ9H1B7 796 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 TVP23BQ9NYZ1 205 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 CRNNQ9UBG3 495 aaPredicted RBP12.27□□□□□ -0.45
VPS52-218ENST00000482399 PCDHGA6Q9Y5G7 932 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 CLCA3PQ9Y6N3 262 aa12.27□□□□□ -0.45
VPS52-218ENST00000482399 IGLV3-10A0A075B6K4 115 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 SLC35F4A4IF30 521 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 ADAMDEC1O15204 470 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 CDRT1O95170 752 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 C6orf47O95873 294 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 SERPINA4P29622 427 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 ATN1P54259 1190 aaPredicted RBP12.26□□□□□ -0.45
VPS52-218ENST00000482399 MC1RQ01726 317 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 ALDH6A1Q02252 535 aaKnown RBP12.26□□□□□ -0.45
VPS52-218ENST00000482399 KEAP1Q14145 624 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 VEPH1Q14D04 833 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 CLLU1OSQ5K130 101 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 196.6 ms