RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 NPPBP16860 134 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 CCND1P24385 295 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 HRH2P25021 359 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 GRK3P35626 688 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 CCR8P51685 355 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 TAS2R39P59534 338 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 OLR1P78380 273 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 ARG2P78540 354 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 CDC16Q13042 620 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 MFAP5Q13361 173 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 FAM53BQ14153 422 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 ZNF169Q14929 603 aaPredicted RBP9.91□□□□□ -0.82
CPSF4-212ENST00000482251 PCOLCEQ15113 449 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 PPP1R3AQ16821 1122 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 C18orf21Q32NC0 220 aaPredicted RBP9.91□□□□□ -0.82
CPSF4-212ENST00000482251 DUPD1Q68J44 220 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 ISLR2Q6UXK2 745 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 NDUFAF7Q7L592 441 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 TMPRSS11BQ86T26 416 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 CTAGE6Q86UF2 777 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 CEP97Q8IW35 865 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 CAMKVQ8NCB2 501 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 ZNF740Q8NDX6 193 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 CATSPER1Q8NEC5 780 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 OR5T3Q8NGG3 340 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 OR56A3Q8NH54 315 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 OR51Q1Q8NH59 317 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 ANKRD49Q8WVL7 239 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 SLC13A3Q8WWT9 602 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 NEIL2Q969S2 332 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 FBXL8Q96CD0 374 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 VPS39Q96JC1 886 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 EGFL8Q99944 293 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 HAUS8Q9BT25 410 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 TRIM54Q9BYV2 358 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 CAB39LQ9H9S4 337 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 ANKHQ9HCJ1 492 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 SAYSD1Q9NPB0 183 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 RIC8BQ9NVN3 520 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 PLA2G3Q9NZ20 509 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 NAALAD2Q9Y3Q0 740 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 COPG1Q9Y678 874 aaKnown RBP9.91□□□□□ -0.82
CPSF4-212ENST00000482251 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.91□□□□□ -0.82
CPSF4-212ENST00000482251 USP9XQ93008 2570 aaPredicted RBP9.9□□□□□ -0.82
CPSF4-212ENST00000482251 CXorf49A8MYA2 514 aaPredicted RBP9.9□□□□□ -0.82
CPSF4-212ENST00000482251 E7ESA3 106 aa9.9□□□□□ -0.82
CPSF4-212ENST00000482251 H0YIG0 161 aa9.9□□□□□ -0.82
CPSF4-212ENST00000482251 ENO2P09104 434 aaPredicted RBP9.9□□□□□ -0.82
CPSF4-212ENST00000482251 SSTR1P30872 391 aa9.9□□□□□ -0.82
CPSF4-212ENST00000482251 HNF4AP41235 474 aa9.9□□□□□ -0.82
CPSF4-212ENST00000482251 ST13P50502 369 aaKnown RBP9.9□□□□□ -0.82
CPSF4-212ENST00000482251 AP1S2P56377 157 aa9.9□□□□□ -0.82
CPSF4-212ENST00000482251 RELAQ04206 551 aa9.9□□□□□ -0.82
CPSF4-212ENST00000482251 SRSF11Q05519 484 aaKnown RBP9.9□□□□□ -0.82
CPSF4-212ENST00000482251 CALCOCO2Q13137 446 aa9.9□□□□□ -0.82
CPSF4-212ENST00000482251 ESPL1Q14674 2120 aa9.9□□□□□ -0.82
CPSF4-212ENST00000482251 TSNQ15631 228 aaKnown RBP9.9□□□□□ -0.82
CPSF4-212ENST00000482251 FBXO48Q5FWF7 155 aa9.9□□□□□ -0.82
CPSF4-212ENST00000482251 IGFL2Q6UWQ7 119 aa9.9□□□□□ -0.82
CPSF4-212ENST00000482251 FRA10AC1Q70Z53 315 aa9.9□□□□□ -0.82
CPSF4-212ENST00000482251 SPATA6LQ8N4H0 392 aa9.9□□□□□ -0.82
CPSF4-212ENST00000482251 MFSD9Q8NBP5 474 aa9.9□□□□□ -0.82
CPSF4-212ENST00000482251 SPATA4Q8NEY3 305 aa9.9□□□□□ -0.82
CPSF4-212ENST00000482251 SLC5A11Q8WWX8 675 aa9.9□□□□□ -0.82
CPSF4-212ENST00000482251 METTL21AQ8WXB1 218 aa9.9□□□□□ -0.82
CPSF4-212ENST00000482251 PEX11GQ96HA9 241 aa9.9□□□□□ -0.82
CPSF4-212ENST00000482251 TGIF2Q9GZN2 237 aa9.9□□□□□ -0.82
CPSF4-212ENST00000482251 LRRC4CQ9HCJ2 640 aa9.9□□□□□ -0.82
CPSF4-212ENST00000482251 GPAMQ9HCL2 828 aa9.9□□□□□ -0.82
CPSF4-212ENST00000482251 MOCS1Q9NZB8 636 aa9.9□□□□□ -0.82
CPSF4-212ENST00000482251 DYRK1BQ9Y463 629 aa9.9□□□□□ -0.82
CPSF4-212ENST00000482251 CPAMD8Q8IZJ3 1885 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 KCNE1BA0A087WTH5 132 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 TRBC2A0A5B9 178 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 ANKUB1A6NFN9 424 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 PHGDHO43175 533 aaKnown RBP9.89□□□□□ -0.83
CPSF4-212ENST00000482251 DNAJB6O75190 326 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 WFS1O76024 890 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 SERPINA7P05543 415 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 ZNF888P0CJ79 500 aaPredicted RBP9.89□□□□□ -0.83
CPSF4-212ENST00000482251 VARSP26640 1264 aaKnown RBP9.89□□□□□ -0.83
CPSF4-212ENST00000482251 CASQ1P31415 396 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 SOX11P35716 441 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 GMPRP36959 345 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 SLC12A2P55011 1212 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 REEP5Q00765 189 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 ELOAQ14241 798 aaKnown RBP9.89□□□□□ -0.83
CPSF4-212ENST00000482251 FRG1Q14331 258 aaKnown RBP9.89□□□□□ -0.83
CPSF4-212ENST00000482251 CSHL1Q14406 222 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 TLR1Q15399 786 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 BTBD16Q32M84 506 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 DEFB134Q4QY38 66 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 CRB2Q5IJ48 1285 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 FCRLBQ6BAA4 426 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 TMEM205Q6UW68 189 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 SYT10Q6XYQ8 523 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 THOC6Q86W42 341 aaKnown RBP9.89□□□□□ -0.83
CPSF4-212ENST00000482251 CCDC25Q86WR0 208 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 ABHD11Q8NFV4 315 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 OR1N1Q8NGS0 311 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms