RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 LPAR4Q99677 370 aa16.3■□□□□ 0.2
RXRB-203ENST00000481441 GSX1Q9H4S2 264 aaPredicted RBP16.3■□□□□ 0.2
RXRB-203ENST00000481441 TRIM45Q9H8W5 580 aaPredicted RBP16.3■□□□□ 0.2
RXRB-203ENST00000481441 KCNJ16Q9NPI9 418 aa16.3■□□□□ 0.2
RXRB-203ENST00000481441 CCM2LQ9NUG4 571 aaPredicted RBP16.3■□□□□ 0.2
RXRB-203ENST00000481441 ZKSCAN5Q9Y2L8 839 aa16.3■□□□□ 0.2
RXRB-203ENST00000481441 REXO2Q9Y3B8 237 aaKnown RBP16.3■□□□□ 0.2
RXRB-203ENST00000481441 PCDHA13Q9Y5I0 950 aa16.3■□□□□ 0.2
RXRB-203ENST00000481441 DNAJC13O75165 2243 aa16.3■□□□□ 0.2
RXRB-203ENST00000481441 FBN3Q75N90 2809 aa16.3■□□□□ 0.2
RXRB-203ENST00000481441 NDC80O14777 642 aa16.29■□□□□ 0.2
RXRB-203ENST00000481441 PSIP1O75475 530 aaKnown RBP16.29■□□□□ 0.2
RXRB-203ENST00000481441 DRD2P14416 443 aa16.29■□□□□ 0.2
RXRB-203ENST00000481441 IL1RNP18510 177 aa16.29■□□□□ 0.2
RXRB-203ENST00000481441 TPP2P29144 1249 aaPredicted RBP16.29■□□□□ 0.2
RXRB-203ENST00000481441 BCL6P41182 706 aa16.29■□□□□ 0.2
RXRB-203ENST00000481441 PNLIPRP1P54315 467 aa16.29■□□□□ 0.2
RXRB-203ENST00000481441 EIF3BP55884 814 aaKnown RBP16.29■□□□□ 0.2
RXRB-203ENST00000481441 SLC26A5P58743 744 aa16.29■□□□□ 0.2
RXRB-203ENST00000481441 TAS2R50P59544 299 aa16.29■□□□□ 0.2
RXRB-203ENST00000481441 PPP2R2AP63151 447 aa16.29■□□□□ 0.2
RXRB-203ENST00000481441 ABATP80404 500 aa16.29■□□□□ 0.2
RXRB-203ENST00000481441 RHAGQ02094 409 aa16.29■□□□□ 0.2
RXRB-203ENST00000481441 FOLH1Q04609 750 aa16.29■□□□□ 0.2
RXRB-203ENST00000481441 USP10Q14694 798 aaKnown RBP16.29■□□□□ 0.2
RXRB-203ENST00000481441 VN1R4Q7Z5H5 301 aa16.29■□□□□ 0.2
RXRB-203ENST00000481441 ADCK2Q7Z695 626 aa16.29■□□□□ 0.2
RXRB-203ENST00000481441 RPS19BP1Q86WX3 136 aaKnown RBP16.29■□□□□ 0.2
RXRB-203ENST00000481441 MPP5Q8N3R9 675 aa16.29■□□□□ 0.2
RXRB-203ENST00000481441 POGLUT1Q8NBL1 392 aa16.29■□□□□ 0.2
RXRB-203ENST00000481441 PPFIBP2Q8ND30 876 aa16.29■□□□□ 0.2
RXRB-203ENST00000481441 MCOLN3Q8TDD5 553 aa16.29■□□□□ 0.2
RXRB-203ENST00000481441 ELP5Q8TE02 316 aa16.29■□□□□ 0.2
RXRB-203ENST00000481441 RND1Q92730 232 aa16.29■□□□□ 0.2
RXRB-203ENST00000481441 PKP4Q99569 1192 aa16.29■□□□□ 0.2
RXRB-203ENST00000481441 ETNK1Q9HBU6 452 aa16.29■□□□□ 0.2
RXRB-203ENST00000481441 DLL4Q9NR61 685 aa16.29■□□□□ 0.2
RXRB-203ENST00000481441 ZNF407Q9C0G0 2248 aa16.29■□□□□ 0.2
RXRB-203ENST00000481441 FLNAP21333 2647 aaKnown RBP16.29■□□□□ 0.2
RXRB-203ENST00000481441 GOLGA6L9A6NEM1 432 aa16.28■□□□□ 0.2
RXRB-203ENST00000481441 E7ENX8 843 aa16.28■□□□□ 0.2
RXRB-203ENST00000481441 SGK494L7N484 410 aa16.28■□□□□ 0.2
RXRB-203ENST00000481441 TFECO14948 347 aaPredicted RBP16.28■□□□□ 0.2
RXRB-203ENST00000481441 NDUFS3O75489 264 aa16.28■□□□□ 0.2
RXRB-203ENST00000481441 SLC16A8O95907 504 aa16.28■□□□□ 0.2
RXRB-203ENST00000481441 CYB561P49447 251 aa16.28■□□□□ 0.2
RXRB-203ENST00000481441 TAP2Q03519 686 aa16.28■□□□□ 0.2
RXRB-203ENST00000481441 KLF1Q13351 362 aaPredicted RBP16.28■□□□□ 0.2
RXRB-203ENST00000481441 ABRAXAS2Q15018 415 aa16.28■□□□□ 0.2
RXRB-203ENST00000481441 SPA17Q15506 151 aa16.28■□□□□ 0.2
RXRB-203ENST00000481441 NSDHLQ15738 373 aa16.28■□□□□ 0.2
RXRB-203ENST00000481441 TMEM214Q6NUQ4 689 aaKnown RBP16.28■□□□□ 0.2
RXRB-203ENST00000481441 CCDC71Q8IV32 467 aaPredicted RBP16.28■□□□□ 0.2
RXRB-203ENST00000481441 RPRMLQ8N4K4 120 aa16.28■□□□□ 0.2
RXRB-203ENST00000481441 PLPP5Q8NEB5 264 aa16.28■□□□□ 0.2
RXRB-203ENST00000481441 ZNF480Q8WV37 535 aa16.28■□□□□ 0.2
RXRB-203ENST00000481441 MACROD1Q9BQ69 325 aa16.28■□□□□ 0.2
RXRB-203ENST00000481441 CHRAC1Q9NRG0 131 aa16.28■□□□□ 0.2
RXRB-203ENST00000481441 FAM114A2Q9NRY5 505 aa16.28■□□□□ 0.2
RXRB-203ENST00000481441 H7BY64 318 aa16.27■□□□□ 0.2
RXRB-203ENST00000481441 SMAPO00193 183 aa16.27■□□□□ 0.2
RXRB-203ENST00000481441 NIPSNAP2O75323 286 aa16.27■□□□□ 0.2
RXRB-203ENST00000481441 ZWINTO95229 277 aa16.27■□□□□ 0.2
RXRB-203ENST00000481441 IPO7O95373 1038 aaKnown RBP16.27■□□□□ 0.2
RXRB-203ENST00000481441 HSD17B2P37059 387 aa16.27■□□□□ 0.2
RXRB-203ENST00000481441 ACTN3Q08043 901 aaPredicted RBP16.27■□□□□ 0.2
RXRB-203ENST00000481441 FOXD4Q12950 439 aaPredicted RBP16.27■□□□□ 0.2
RXRB-203ENST00000481441 MYBPHQ13203 477 aa16.27■□□□□ 0.2
RXRB-203ENST00000481441 CMPK2Q5EBM0 449 aa16.27■□□□□ 0.2
RXRB-203ENST00000481441 KIF2BQ8N4N8 673 aa16.27■□□□□ 0.2
RXRB-203ENST00000481441 PPHLN1Q8NEY8 458 aaKnown RBP16.27■□□□□ 0.2
RXRB-203ENST00000481441 TSLPQ969D9 159 aa16.27■□□□□ 0.2
RXRB-203ENST00000481441 FAM136AQ96C01 138 aa16.27■□□□□ 0.2
RXRB-203ENST00000481441 PRAP1Q96NZ9 151 aa16.27■□□□□ 0.2
RXRB-203ENST00000481441 EBNA1BP2Q99848 306 aaKnown RBP16.27■□□□□ 0.2
RXRB-203ENST00000481441 TP63Q9H3D4 680 aaPredicted RBP16.27■□□□□ 0.2
RXRB-203ENST00000481441 SLC24A3Q9HC58 644 aa16.27■□□□□ 0.2
RXRB-203ENST00000481441 PLSCR2Q9NRY7 297 aa16.27■□□□□ 0.2
RXRB-203ENST00000481441 LANCL2Q9NS86 450 aa16.27■□□□□ 0.2
RXRB-203ENST00000481441 TREX1Q9NSU2 369 aa16.27■□□□□ 0.2
RXRB-203ENST00000481441 GALPQ9UBC7 116 aa16.27■□□□□ 0.2
RXRB-203ENST00000481441 RPH3AQ9Y2J0 694 aaPredicted RBP16.27■□□□□ 0.2
RXRB-203ENST00000481441 KCNE1BA0A087WTH5 132 aa16.26■□□□□ 0.19
RXRB-203ENST00000481441 TMEM200CA6NKL6 621 aa16.26■□□□□ 0.19
RXRB-203ENST00000481441 ZNF839A8K0R7 811 aa16.26■□□□□ 0.19
RXRB-203ENST00000481441 MAGEB17A8MXT2 336 aa16.26■□□□□ 0.19
RXRB-203ENST00000481441 KLK8O60259 260 aa16.26■□□□□ 0.19
RXRB-203ENST00000481441 CATP04040 527 aaKnown RBP16.26■□□□□ 0.19
RXRB-203ENST00000481441 CCDC175P0C221 793 aa16.26■□□□□ 0.19
RXRB-203ENST00000481441 TFEBP19484 476 aa16.26■□□□□ 0.19
RXRB-203ENST00000481441 TRHRP34981 398 aaPredicted RBP16.26■□□□□ 0.19
RXRB-203ENST00000481441 FDFT1P37268 417 aa16.26■□□□□ 0.19
RXRB-203ENST00000481441 RFC3P40938 356 aa16.26■□□□□ 0.19
RXRB-203ENST00000481441 MEOX1P50221 254 aa16.26■□□□□ 0.19
RXRB-203ENST00000481441 ITGA8P53708 1063 aa16.26■□□□□ 0.19
RXRB-203ENST00000481441 MLF1P58340 268 aa16.26■□□□□ 0.19
RXRB-203ENST00000481441 KLHL38Q2WGJ6 581 aa16.26■□□□□ 0.19
RXRB-203ENST00000481441 ACSBG2Q5FVE4 666 aa16.26■□□□□ 0.19
RXRB-203ENST00000481441 EMC4Q5J8M3 183 aa16.26■□□□□ 0.19
RXRB-203ENST00000481441 PCID2Q5JVF3 399 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms