RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 BTBD16Q32M84 506 aa14.41□□□□□ -0.1
LIMS3-203ENST00000480744 MSS51Q4VC12 460 aa14.41□□□□□ -0.1
LIMS3-203ENST00000480744 HP1BP3Q5SSJ5 553 aaPredicted RBP14.41□□□□□ -0.1
LIMS3-203ENST00000480744 C1QL3Q5VWW1 255 aa14.41□□□□□ -0.1
LIMS3-203ENST00000480744 TMEM214Q6NUQ4 689 aaKnown RBP14.41□□□□□ -0.1
LIMS3-203ENST00000480744 CPEB2Q7Z5Q1 589 aaKnown RBP14.41□□□□□ -0.1
LIMS3-203ENST00000480744 FJX1Q86VR8 437 aa14.41□□□□□ -0.1
LIMS3-203ENST00000480744 SLC26A11Q86WA9 606 aa14.41□□□□□ -0.1
LIMS3-203ENST00000480744 GPATCH11Q8N954 259 aa14.41□□□□□ -0.1
LIMS3-203ENST00000480744 KCT2Q8NC54 265 aa14.41□□□□□ -0.1
LIMS3-203ENST00000480744 SLC13A3Q8WWT9 602 aa14.41□□□□□ -0.1
LIMS3-203ENST00000480744 THAP11Q96EK4 314 aa14.41□□□□□ -0.1
LIMS3-203ENST00000480744 CFAP36Q96G28 342 aa14.41□□□□□ -0.1
LIMS3-203ENST00000480744 IMMP1LQ96LU5 166 aa14.41□□□□□ -0.1
LIMS3-203ENST00000480744 CYTH2Q99418 400 aa14.41□□□□□ -0.1
LIMS3-203ENST00000480744 RBCK1Q9BYM8 510 aa14.41□□□□□ -0.1
LIMS3-203ENST00000480744 ARL15Q9NXU5 204 aa14.41□□□□□ -0.1
LIMS3-203ENST00000480744 TEKT2Q9UIF3 430 aa14.41□□□□□ -0.1
LIMS3-203ENST00000480744 ITPR2Q14571 2701 aa14.41□□□□□ -0.1
LIMS3-203ENST00000480744 OR5H15A6NDH6 313 aa14.4□□□□□ -0.1
LIMS3-203ENST00000480744 ZNF860A6NHJ4 632 aa14.4□□□□□ -0.1
LIMS3-203ENST00000480744 LCMT2O60294 686 aaKnown RBP14.4□□□□□ -0.1
LIMS3-203ENST00000480744 ZG16O60844 167 aa14.4□□□□□ -0.1
LIMS3-203ENST00000480744 AHSGP02765 367 aa14.4□□□□□ -0.1
LIMS3-203ENST00000480744 SLC35G6P0C7Q6 338 aa14.4□□□□□ -0.1
LIMS3-203ENST00000480744 PGGT1BP53609 377 aa14.4□□□□□ -0.1
LIMS3-203ENST00000480744 MEF2AQ02078 507 aaPredicted RBP14.4□□□□□ -0.1
LIMS3-203ENST00000480744 SRSF11Q05519 484 aaKnown RBP14.4□□□□□ -0.1
LIMS3-203ENST00000480744 INAQ16352 499 aa14.4□□□□□ -0.1
LIMS3-203ENST00000480744 FCRLBQ6BAA4 426 aa14.4□□□□□ -0.1
LIMS3-203ENST00000480744 CAPN13Q6MZZ7 669 aaPredicted RBP14.4□□□□□ -0.1
LIMS3-203ENST00000480744 LCTLQ6UWM7 567 aa14.4□□□□□ -0.1
LIMS3-203ENST00000480744 PCGF5Q86SE9 256 aa14.4□□□□□ -0.1
LIMS3-203ENST00000480744 C17orf53Q8N3J3 647 aaPredicted RBP14.4□□□□□ -0.1
LIMS3-203ENST00000480744 NR4A3Q92570 626 aa14.4□□□□□ -0.1
LIMS3-203ENST00000480744 PYCR2Q96C36 320 aa14.4□□□□□ -0.1
LIMS3-203ENST00000480744 CERS2Q96G23 380 aa14.4□□□□□ -0.1
LIMS3-203ENST00000480744 NAT9Q9BTE0 207 aa14.4□□□□□ -0.1
LIMS3-203ENST00000480744 SGPP1Q9BX95 441 aa14.4□□□□□ -0.1
LIMS3-203ENST00000480744 STMN3Q9NZ72 180 aa14.4□□□□□ -0.1
LIMS3-203ENST00000480744 SNX12Q9UMY4 172 aa14.4□□□□□ -0.1
LIMS3-203ENST00000480744 A0A1B0GUH1 482 aa14.39□□□□□ -0.11
LIMS3-203ENST00000480744 FANCGO15287 622 aa14.39□□□□□ -0.11
LIMS3-203ENST00000480744 PRAMEF2O60811 474 aa14.39□□□□□ -0.11
LIMS3-203ENST00000480744 CDC123O75794 336 aaPredicted RBP14.39□□□□□ -0.11
LIMS3-203ENST00000480744 RASAL1O95294 804 aa14.39□□□□□ -0.11
LIMS3-203ENST00000480744 SERPIND1P05546 499 aa14.39□□□□□ -0.11
LIMS3-203ENST00000480744 CCR8P51685 355 aa14.39□□□□□ -0.11
LIMS3-203ENST00000480744 IL2P60568 153 aa14.39□□□□□ -0.11
LIMS3-203ENST00000480744 ZNF324BQ6AW86 544 aaPredicted RBP14.39□□□□□ -0.11
LIMS3-203ENST00000480744 GFRALQ6UXV0 394 aa14.39□□□□□ -0.11
LIMS3-203ENST00000480744 KIAA0408Q6ZU52 694 aa14.39□□□□□ -0.11
LIMS3-203ENST00000480744 ANKRD37Q7Z713 158 aa14.39□□□□□ -0.11
LIMS3-203ENST00000480744 PDSS2Q86YH6 399 aa14.39□□□□□ -0.11
LIMS3-203ENST00000480744 IGDCC3Q8IVU1 814 aa14.39□□□□□ -0.11
LIMS3-203ENST00000480744 MFSD9Q8NBP5 474 aa14.39□□□□□ -0.11
LIMS3-203ENST00000480744 TM4SF19Q96DZ7 209 aa14.39□□□□□ -0.11
LIMS3-203ENST00000480744 PEX11GQ96HA9 241 aa14.39□□□□□ -0.11
LIMS3-203ENST00000480744 HAUS8Q9BT25 410 aa14.39□□□□□ -0.11
LIMS3-203ENST00000480744 TRIM54Q9BYV2 358 aa14.39□□□□□ -0.11
LIMS3-203ENST00000480744 RNF32Q9H0A6 362 aa14.39□□□□□ -0.11
LIMS3-203ENST00000480744 KCNK13Q9HB14 408 aa14.39□□□□□ -0.11
LIMS3-203ENST00000480744 CHMP2BQ9UQN3 213 aa14.39□□□□□ -0.11
LIMS3-203ENST00000480744 NAALAD2Q9Y3Q0 740 aa14.39□□□□□ -0.11
LIMS3-203ENST00000480744 CELSR2Q9HCU4 2923 aa14.38□□□□□ -0.11
LIMS3-203ENST00000480744 NDUFS4O43181 175 aa14.38□□□□□ -0.11
LIMS3-203ENST00000480744 OR1F1O43749 312 aa14.38□□□□□ -0.11
LIMS3-203ENST00000480744 UNC5CO95185 931 aa14.38□□□□□ -0.11
LIMS3-203ENST00000480744 GUCA1CO95843 209 aa14.38□□□□□ -0.11
LIMS3-203ENST00000480744 CRYABP02511 175 aaKnown RBP14.38□□□□□ -0.11
LIMS3-203ENST00000480744 CYC1P08574 325 aa14.38□□□□□ -0.11
LIMS3-203ENST00000480744 STSP08842 583 aa14.38□□□□□ -0.11
LIMS3-203ENST00000480744 MYBL2P10244 700 aa14.38□□□□□ -0.11
LIMS3-203ENST00000480744 NPPBP16860 134 aa14.38□□□□□ -0.11
LIMS3-203ENST00000480744 ELK3P41970 407 aa14.38□□□□□ -0.11
LIMS3-203ENST00000480744 AGTR2P50052 363 aa14.38□□□□□ -0.11
LIMS3-203ENST00000480744 ST13P50502 369 aaKnown RBP14.38□□□□□ -0.11
LIMS3-203ENST00000480744 TDGF1P3P51864 188 aa14.38□□□□□ -0.11
LIMS3-203ENST00000480744 PMP22Q01453 160 aa14.38□□□□□ -0.11
LIMS3-203ENST00000480744 ACTN3Q08043 901 aaPredicted RBP14.38□□□□□ -0.11
LIMS3-203ENST00000480744 ZRSR2Q15696 482 aaKnown RBP14.38□□□□□ -0.11
LIMS3-203ENST00000480744 HECTD2Q5U5R9 776 aa14.38□□□□□ -0.11
LIMS3-203ENST00000480744 DUPD1Q68J44 220 aa14.38□□□□□ -0.11
LIMS3-203ENST00000480744 PLAG1Q6DJT9 500 aa14.38□□□□□ -0.11
LIMS3-203ENST00000480744 CNTN4Q8IWV2 1026 aa14.38□□□□□ -0.11
LIMS3-203ENST00000480744 BEST3Q8N1M1 668 aa14.38□□□□□ -0.11
LIMS3-203ENST00000480744 PWWP2AQ96N64 755 aa14.38□□□□□ -0.11
LIMS3-203ENST00000480744 FAM129AQ9BZQ8 928 aa14.38□□□□□ -0.11
LIMS3-203ENST00000480744 TRGV8A0A0C4DH27 118 aa14.37□□□□□ -0.11
LIMS3-203ENST00000480744 CES2O00748 559 aa14.37□□□□□ -0.11
LIMS3-203ENST00000480744 TSPAN12O95859 305 aa14.37□□□□□ -0.11
LIMS3-203ENST00000480744 SAT1P21673 171 aa14.37□□□□□ -0.11
LIMS3-203ENST00000480744 AP1S2P56377 157 aa14.37□□□□□ -0.11
LIMS3-203ENST00000480744 OLR1P78380 273 aa14.37□□□□□ -0.11
LIMS3-203ENST00000480744 ABRAXAS2Q15018 415 aa14.37□□□□□ -0.11
LIMS3-203ENST00000480744 HERC3Q15034 1050 aa14.37□□□□□ -0.11
LIMS3-203ENST00000480744 NSDHLQ15738 373 aa14.37□□□□□ -0.11
LIMS3-203ENST00000480744 SFT2D3Q587I9 215 aa14.37□□□□□ -0.11
LIMS3-203ENST00000480744 ACER2Q5QJU3 275 aa14.37□□□□□ -0.11
LIMS3-203ENST00000480744 TEDDM1Q5T9Z0 273 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms