RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 FANK1Q8TC84 345 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 PCED1BQ96HM7 432 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 PRODH2Q9UF12 536 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 AHSA1O95433 338 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 OAS1P00973 400 aaKnown RBP9.28□□□□□ -0.92
VEGFA-212ENST00000480614 STON2Q8WXE9 905 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 MFSD3Q96ES6 412 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 GTPBP2Q9BX10 602 aaKnown RBP9.28□□□□□ -0.92
VEGFA-212ENST00000480614 ASB6Q9NWX5 421 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 POMPQ9Y244 141 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 PCDHB14Q9Y5E9 798 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 HSPA12AO43301 675 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 ERI3O43414 337 aaKnown RBP9.28□□□□□ -0.92
VEGFA-212ENST00000480614 TBX1O43435 398 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 FARS2O95363 451 aaKnown RBP9.28□□□□□ -0.92
VEGFA-212ENST00000480614 CHAF1BQ13112 559 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 ZNF550Q7Z398 422 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 UBE2Q1Q7Z7E8 422 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 TREML1Q86YW5 311 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 TMEM126BQ8IUX1 230 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 ING5Q8WYH8 240 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 LAMP5Q9UJQ1 280 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 TP53I11O14683 189 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 SLC6A6P31641 620 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 SLC15A1P46059 708 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 KCTD19Q17RG1 926 aaPredicted RBP9.28□□□□□ -0.92
VEGFA-212ENST00000480614 PAOXQ6QHF9 649 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 ORAI3Q9BRQ5 295 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 SUV39H2Q9H5I1 410 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 RIMKLBQ9ULI2 386 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 ZFC3H1O60293 1989 aaKnown RBP9.28□□□□□ -0.92
VEGFA-212ENST00000480614 UPK3BL1B0FP48 263 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 UPK3BL2E5RIL1 263 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 MT-ND1P03886 318 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 EML3Q32P44 896 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 FTMTQ8N4E7 242 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 C2orf73Q8N5S3 287 aaPredicted RBP9.28□□□□□ -0.92
VEGFA-212ENST00000480614 ADAP2Q9NPF8 381 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 ZFP57Q9NU63 452 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 PADI3Q9ULW8 664 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 NOP16Q9Y3C1 178 aaKnown RBP9.28□□□□□ -0.92
VEGFA-212ENST00000480614 KLHL33A6NCF5 533 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 GRHL3Q8TE85 626 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 SMPDL3BQ92485 455 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 RCCD1A6NED2 376 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 TGFB1I1O43294 461 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 UGT1A9O60656 530 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 UGT1A6P19224 532 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 UGT1A1P22309 533 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 UGT1A4P22310 534 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 SCGB2B2Q4G0G5 96 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 DCUN1D3Q8IWE4 304 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 TMEM234Q8WY98 164 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 TLCD1Q96CP7 247 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 NPLQ9BXD5 320 aaPredicted RBP9.28□□□□□ -0.92
VEGFA-212ENST00000480614 UGT1A7Q9HAW7 530 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 UGT1A10Q9HAW8 530 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 UGT1A8Q9HAW9 530 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 MS4A12Q9NXJ0 267 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 RGPD5Q99666 1765 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 ARPC2O15144 300 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 EPHB6O15197 1021 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 EDNRAP25101 427 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 CDH11P55287 796 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 OGFOD2Q6N063 350 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 SLC36A4Q6YBV0 504 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 SERTAD3Q9UJW9 196 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 ACSL5Q9ULC5 683 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 NALCNQ8IZF0 1738 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 RP2O75695 350 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 PIAS1O75925 651 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 FAM155BO75949 473 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 HSD3B1P14060 373 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 PLP2Q04941 152 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 ZNF517Q6ZMY9 492 aaPredicted RBP9.28□□□□□ -0.92
VEGFA-212ENST00000480614 SPATA22Q8NHS9 363 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 PTPN18Q99952 460 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 CARS2Q9HA77 564 aaKnown RBP9.28□□□□□ -0.92
VEGFA-212ENST00000480614 TREM1Q9NP99 234 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 SCN1AP35498 2009 aa9.27□□□□□ -0.92
VEGFA-212ENST00000480614 LRRN3E7EW58 273 aa9.27□□□□□ -0.92
VEGFA-212ENST00000480614 S1PR1P21453 382 aa9.27□□□□□ -0.92
VEGFA-212ENST00000480614 MSX2P35548 267 aaPredicted RBP9.27□□□□□ -0.92
VEGFA-212ENST00000480614 WDR45BQ5MNZ6 344 aa9.27□□□□□ -0.92
VEGFA-212ENST00000480614 PSMG2Q969U7 264 aa9.27□□□□□ -0.92
VEGFA-212ENST00000480614 LRRN3Q9H3W5 708 aa9.27□□□□□ -0.92
VEGFA-212ENST00000480614 UTS2RQ9UKP6 389 aa9.27□□□□□ -0.92
VEGFA-212ENST00000480614 RGPD1P0DJD0 1748 aa9.27□□□□□ -0.92
VEGFA-212ENST00000480614 TEX13DA0A0J9YY54 714 aaPredicted RBP9.27□□□□□ -0.92
VEGFA-212ENST00000480614 E7EQ34 232 aa9.27□□□□□ -0.92
VEGFA-212ENST00000480614 TRAPPC6AO75865 159 aa9.27□□□□□ -0.92
VEGFA-212ENST00000480614 ADH5P11766 374 aa9.27□□□□□ -0.92
VEGFA-212ENST00000480614 CRISP1P54107 249 aa9.27□□□□□ -0.92
VEGFA-212ENST00000480614 PHC1P78364 1004 aa9.27□□□□□ -0.92
VEGFA-212ENST00000480614 C16orf58Q96GQ5 468 aa9.27□□□□□ -0.92
VEGFA-212ENST00000480614 TMEM175Q9BSA9 504 aa9.27□□□□□ -0.92
VEGFA-212ENST00000480614 PTBP2Q9UKA9 531 aaKnown RBP9.27□□□□□ -0.92
VEGFA-212ENST00000480614 FCF1Q9Y324 198 aaKnown RBP9.27□□□□□ -0.92
VEGFA-212ENST00000480614 DEFA5Q01523 94 aa9.27□□□□□ -0.93
VEGFA-212ENST00000480614 FPGSQ05932 587 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms