RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 TMEM120AQ9BXJ8 343 aa8.57□□□□□ -1.04
NUDCD3-208ENST00000480209 RHBGQ9H310 441 aa8.57□□□□□ -1.04
NUDCD3-208ENST00000480209 ELOVL6Q9H5J4 265 aa8.57□□□□□ -1.04
NUDCD3-208ENST00000480209 WDR55Q9H6Y2 383 aaPredicted RBP8.57□□□□□ -1.04
NUDCD3-208ENST00000480209 NT5DC2Q9H857 520 aa8.57□□□□□ -1.04
NUDCD3-208ENST00000480209 SOHLH2Q9NX45 425 aa8.57□□□□□ -1.04
NUDCD3-208ENST00000480209 DCTN4Q9UJW0 460 aa8.57□□□□□ -1.04
NUDCD3-208ENST00000480209 SNX7Q9UNH6 387 aa8.57□□□□□ -1.04
NUDCD3-208ENST00000480209 TSC22D4Q9Y3Q8 395 aa8.57□□□□□ -1.04
NUDCD3-208ENST00000480209 PTPRZ1P23471 2315 aaPredicted RBP8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 A0A0G2JND7 137 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 H0YGG7 62 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 LSM1O15116 133 aaKnown RBP8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 NDUFS4O43181 175 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 SNX3O60493 162 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 MED26O95402 600 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 TGDSO95455 350 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 ZBTB11O95625 1053 aaPredicted RBP8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 FAM107AO95990 144 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 B3GALT4O96024 378 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 TGFB1P01137 390 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 KRT6AP02538 564 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 KRT6BP04259 564 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 ANKRD34CP0C6C1 535 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 PRR35P0CG20 571 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 FOLR1P15328 257 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 HRH2P25021 359 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 EPHA3P29320 983 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 KRT6CP48668 564 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 IDH3AP50213 366 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 ARF3P61204 181 aaPredicted RBP8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 RPS15AP62244 130 aaKnown RBP8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 TBL3Q12788 808 aaKnown RBP8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 LAPTM5Q13571 262 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 SPIDRQ14159 915 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 TRIP6Q15654 476 aaKnown RBP8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 GPR19Q15760 415 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 HKDC1Q2TB90 917 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 PAGE2BQ5JRK9 111 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 CDCP2Q5VXM1 449 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 DHRS13Q6UX07 377 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 TRIM46Q7Z4K8 759 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 SPATA21Q7Z572 469 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 PIGWQ7Z7B1 504 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 SHISA5Q8N114 240 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 KRT78Q8N1N4 520 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 D2HGDHQ8N465 521 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 ARHGEF39Q8N4T4 335 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 DTWD1Q8N5C7 304 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 NETO1Q8TDF5 533 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 SELENOMQ8WWX9 145 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 RNF31Q96EP0 1072 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 MARK4Q96L34 752 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 MAGEB10Q96LZ2 347 aaPredicted RBP8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 CCT8L2Q96SF2 557 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 MS4A8Q9BY19 250 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 ZNF717Q9BY31 904 aaPredicted RBP8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 TRIM55Q9BYV6 548 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 PITHD1Q9GZP4 211 aaPredicted RBP8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 KLHL31Q9H511 634 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 LHX9Q9NQ69 397 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 SIDT1Q9NXL6 827 aaKnown RBP8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 KLHL14Q9P2G3 628 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 ZFP69BQ9UJL9 534 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 SNX6Q9UNH7 406 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 MRPS2Q9Y399 296 aaKnown RBP8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 PCDHGA11Q9Y5H2 935 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 AP1M2Q9Y6Q5 423 aa8.56□□□□□ -1.04
NUDCD3-208ENST00000480209 CCDC88CQ9P219 2028 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 A0A0G2JN53 185 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 A0A1W2PNU3 283 aaPredicted RBP8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 SERTM1A2A2V5 107 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 FOXE1O00358 373 aaPredicted RBP8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 SAP18O00422 153 aaKnown RBP8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 PLPP1O14494 284 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 HGSO14964 777 aaPredicted RBP8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 DIAPH2O60879 1101 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 ULK1O75385 1050 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 ALDOCP09972 364 aaKnown RBP8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 FTH1P19P0C7X4 201 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 TROVE2P10155 538 aaKnown RBP eCLIP8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 NELFEP18615 380 aaKnown RBP8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 CSRP1P21291 193 aaKnown RBP8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 CXCR2P25025 360 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 GRK3P35626 688 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 AHRP35869 848 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 PIK3CBP42338 1070 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 VSX2P58304 361 aaPredicted RBP8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 RAE1P78406 368 aaKnown RBP8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 HSD11B2P80365 405 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 ZFP36L1Q07352 338 aaKnown RBP8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 CSTF3Q12996 717 aaKnown RBP8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 IFT88Q13099 833 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 NAA25Q14CX7 972 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 CLPPQ16740 277 aaPredicted RBP8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 LSM12Q3MHD2 195 aaKnown RBP8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 PHF19Q5T6S3 580 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 TMEM198Q66K66 360 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 RIPOR1Q6ZS17 1223 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 PRSS41Q7RTY9 318 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms