RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 FGF4P08620 206 aa11.2□□□□□ -0.62
PDCD11-204ENST00000478543 TROVE2P10155 538 aaKnown RBP eCLIP11.2□□□□□ -0.62
PDCD11-204ENST00000478543 CASP2P42575 452 aa11.2□□□□□ -0.62
PDCD11-204ENST00000478543 ACADVLP49748 655 aa11.2□□□□□ -0.62
PDCD11-204ENST00000478543 NEK2P51955 445 aa11.2□□□□□ -0.62
PDCD11-204ENST00000478543 PCDH1Q08174 1060 aa11.2□□□□□ -0.62
PDCD11-204ENST00000478543 LAPTM5Q13571 262 aa11.2□□□□□ -0.62
PDCD11-204ENST00000478543 ZIC1Q15915 447 aa11.2□□□□□ -0.62
PDCD11-204ENST00000478543 PAGE2BQ5JRK9 111 aa11.2□□□□□ -0.62
PDCD11-204ENST00000478543 CACHD1Q5VU97 1274 aa11.2□□□□□ -0.62
PDCD11-204ENST00000478543 FCRL6Q6DN72 434 aa11.2□□□□□ -0.62
PDCD11-204ENST00000478543 ADNP2Q6IQ32 1131 aa11.2□□□□□ -0.62
PDCD11-204ENST00000478543 ZNF425Q6IV72 752 aa11.2□□□□□ -0.62
PDCD11-204ENST00000478543 MED27Q6P2C8 311 aa11.2□□□□□ -0.62
PDCD11-204ENST00000478543 MAVSQ7Z434 540 aa11.2□□□□□ -0.62
PDCD11-204ENST00000478543 PAQR7Q86WK9 346 aa11.2□□□□□ -0.62
PDCD11-204ENST00000478543 FAM129CQ86XR2 697 aa11.2□□□□□ -0.62
PDCD11-204ENST00000478543 PLXDC1Q8IUK5 500 aa11.2□□□□□ -0.62
PDCD11-204ENST00000478543 WDR75Q8IWA0 830 aaKnown RBP11.2□□□□□ -0.62
PDCD11-204ENST00000478543 KRT78Q8N1N4 520 aa11.2□□□□□ -0.62
PDCD11-204ENST00000478543 RNF175Q8N4F7 328 aa11.2□□□□□ -0.62
PDCD11-204ENST00000478543 RFWD2Q8NHY2 731 aa11.2□□□□□ -0.62
PDCD11-204ENST00000478543 FGF11Q92914 225 aa11.2□□□□□ -0.62
PDCD11-204ENST00000478543 WDR34Q96EX3 536 aa11.2□□□□□ -0.62
PDCD11-204ENST00000478543 NAF1Q96HR8 494 aaKnown RBP11.2□□□□□ -0.62
PDCD11-204ENST00000478543 FAR2Q96K12 515 aa11.2□□□□□ -0.62
PDCD11-204ENST00000478543 MAGEB10Q96LZ2 347 aaPredicted RBP11.2□□□□□ -0.62
PDCD11-204ENST00000478543 TRAPPC9Q96Q05 1148 aa11.2□□□□□ -0.62
PDCD11-204ENST00000478543 ELAC2Q9BQ52 826 aaKnown RBP11.2□□□□□ -0.62
PDCD11-204ENST00000478543 PLCD4Q9BRC7 762 aa11.2□□□□□ -0.62
PDCD11-204ENST00000478543 TRIM55Q9BYV6 548 aa11.2□□□□□ -0.62
PDCD11-204ENST00000478543 NUF2Q9BZD4 464 aa11.2□□□□□ -0.62
PDCD11-204ENST00000478543 NRSN2Q9GZP1 204 aa11.2□□□□□ -0.62
PDCD11-204ENST00000478543 SEMA6CQ9H3T2 930 aa11.2□□□□□ -0.62
PDCD11-204ENST00000478543 ELOVL6Q9H5J4 265 aa11.2□□□□□ -0.62
PDCD11-204ENST00000478543 FARSBQ9NSD9 589 aaKnown RBP11.2□□□□□ -0.62
PDCD11-204ENST00000478543 EPHA6Q9UF33 1036 aa11.2□□□□□ -0.62
PDCD11-204ENST00000478543 DCTN4Q9UJW0 460 aa11.2□□□□□ -0.62
PDCD11-204ENST00000478543 USH1CQ9Y6N9 552 aa11.2□□□□□ -0.62
PDCD11-204ENST00000478543 ARID1BQ8NFD5 2236 aaPredicted RBP11.19□□□□□ -0.62
PDCD11-204ENST00000478543 MN1Q10571 1320 aaPredicted RBP11.19□□□□□ -0.62
PDCD11-204ENST00000478543 OR2A25A4D2G3 310 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 TLCD2A6NGC4 264 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 PIP5K1BO14986 540 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 SH3BGRLO75368 114 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 RFPL3O75679 317 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 FKBP9O95302 570 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 PDYNP01213 254 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 KRT6AP02538 564 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 KRT6BP04259 564 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 LINC00032P0C843 101 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 ACP1P24666 158 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 HRH2P25021 359 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 CXCR2P25025 360 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 GRK3P35626 688 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 BCL6P41182 706 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 KRT6CP48668 564 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 SEPHS1P49903 392 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 AQP5P55064 265 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 CYP4F2P78329 520 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 BTKQ06187 659 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 IFT88Q13099 833 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 E2F2Q14209 437 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 ABRAXAS2Q15018 415 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 UGT3A2Q3SY77 523 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 ARHGAP40Q5TG30 622 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 VWA5B1Q5TIE3 1220 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 FRG2Q64ET8 278 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 TMIGD1Q6UXZ0 262 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 TMPRSS9Q7Z410 1059 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.19□□□□□ -0.62
PDCD11-204ENST00000478543 KIRREL3Q8IZU9 778 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 C19orf47Q8N9M1 422 aaKnown RBP11.19□□□□□ -0.62
PDCD11-204ENST00000478543 OR7G3Q8NG95 312 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 OR4K1Q8NGD4 311 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 SELENOMQ8WWX9 145 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 CCT6BQ92526 530 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 FCRL4Q96PJ5 515 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 FRG2BQ96QU4 278 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 GFM1Q96RP9 751 aaKnown RBP11.19□□□□□ -0.62
PDCD11-204ENST00000478543 MTERF1Q99551 399 aaKnown RBP11.19□□□□□ -0.62
PDCD11-204ENST00000478543 TRIM4Q9C037 500 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 RAB33BQ9H082 229 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 TUBB1Q9H4B7 451 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 C1GALT1Q9NS00 363 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 SOHLH2Q9NX45 425 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 ANKMY1Q9P2S6 941 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 VTI1BQ9UEU0 232 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 ZNF490Q9ULM2 529 aaPredicted RBP11.19□□□□□ -0.62
PDCD11-204ENST00000478543 SNX6Q9UNH7 406 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 PCDHGA1Q9Y5H4 931 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 DNAJC15Q9Y5T4 150 aa11.19□□□□□ -0.62
PDCD11-204ENST00000478543 FLNCQ14315 2725 aa11.18□□□□□ -0.62
PDCD11-204ENST00000478543 PCM1Q15154 2024 aa11.18□□□□□ -0.62
PDCD11-204ENST00000478543 IGHV5-51A0A0C4DH38 117 aa11.18□□□□□ -0.62
PDCD11-204ENST00000478543 A0A0G2JND7 137 aa11.18□□□□□ -0.62
PDCD11-204ENST00000478543 A0A0J9YVX5 310 aa11.18□□□□□ -0.62
PDCD11-204ENST00000478543 GOLGA8QA0A0J9YX86 632 aa11.18□□□□□ -0.62
PDCD11-204ENST00000478543 TRBC2A0A5B9 178 aa11.18□□□□□ -0.62
PDCD11-204ENST00000478543 GOLGA8OA6NCC3 632 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms