RNA–Protein interactions for RNA: ENST00000478216.1

RC3H2-208, Transcript of ring finger and CCCH-type domains 2, human

TSL 3

Gene RC3H2, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RC3H2-208	ENST00000478216	LGI4	Q8N135	537 aa		13.36	□□□□□ -0.27
RC3H2-208	ENST00000478216	ARHGEF39	Q8N4T4	335 aa		13.36	□□□□□ -0.27
RC3H2-208	ENST00000478216	SLC35B2	Q8TB61	432 aa		13.36	□□□□□ -0.27
RC3H2-208	ENST00000478216	ATG4A	Q8WYN0	398 aa		13.36	□□□□□ -0.27
RC3H2-208	ENST00000478216	PEX11G	Q96HA9	241 aa		13.36	□□□□□ -0.27
RC3H2-208	ENST00000478216	PRAP1	Q96NZ9	151 aa		13.36	□□□□□ -0.27
RC3H2-208	ENST00000478216	PANX2	Q96RD6	677 aa		13.36	□□□□□ -0.27
RC3H2-208	ENST00000478216	TMUB1	Q9BVT8	246 aa		13.36	□□□□□ -0.27
RC3H2-208	ENST00000478216	TP63	Q9H3D4	680 aa	Predicted RBP	13.36	□□□□□ -0.27
RC3H2-208	ENST00000478216	KCNN3	Q9UGI6	736 aa		13.36	□□□□□ -0.27
RC3H2-208	ENST00000478216	AMFR	Q9UKV5	643 aa		13.36	□□□□□ -0.27
RC3H2-208	ENST00000478216	RNF6	Q9Y252	685 aa		13.36	□□□□□ -0.27
RC3H2-208	ENST00000478216	KLF13	Q9Y2Y9	288 aa	Predicted RBP	13.36	□□□□□ -0.27
RC3H2-208	ENST00000478216	ZNF860	A6NHJ4	632 aa		13.35	□□□□□ -0.27
RC3H2-208	ENST00000478216	FCHO1	O14526	889 aa		13.35	□□□□□ -0.27
RC3H2-208	ENST00000478216	HS6ST1	O60243	411 aa		13.35	□□□□□ -0.27
RC3H2-208	ENST00000478216	PSIP1	O75475	530 aa	Known RBP	13.35	□□□□□ -0.27
RC3H2-208	ENST00000478216	PDE9A	O76083	593 aa		13.35	□□□□□ -0.27
RC3H2-208	ENST00000478216	KLK2	P20151	261 aa		13.35	□□□□□ -0.27
RC3H2-208	ENST00000478216	MSX1	P28360	303 aa		13.35	□□□□□ -0.27
RC3H2-208	ENST00000478216	BCL6	P41182	706 aa		13.35	□□□□□ -0.27
RC3H2-208	ENST00000478216	SLC26A5	P58743	744 aa		13.35	□□□□□ -0.27
RC3H2-208	ENST00000478216	RPS15A	P62244	130 aa	Known RBP	13.35	□□□□□ -0.27
RC3H2-208	ENST00000478216	ACSBG2	Q5FVE4	666 aa		13.35	□□□□□ -0.27
RC3H2-208	ENST00000478216	ZNF468	Q5VIY5	522 aa	Predicted RBP	13.35	□□□□□ -0.27
RC3H2-208	ENST00000478216	TGIF2LY	Q8IUE0	185 aa		13.35	□□□□□ -0.27
RC3H2-208	ENST00000478216	CCDC71	Q8IV32	467 aa	Predicted RBP	13.35	□□□□□ -0.27
RC3H2-208	ENST00000478216	CHERP	Q8IWX8	916 aa	Known RBP	13.35	□□□□□ -0.27
RC3H2-208	ENST00000478216	DMRTC2	Q8IXT2	367 aa	Predicted RBP	13.35	□□□□□ -0.27
RC3H2-208	ENST00000478216	CCDC170	Q8IYT3	715 aa		13.35	□□□□□ -0.27
RC3H2-208	ENST00000478216	CLYBL	Q8N0X4	340 aa		13.35	□□□□□ -0.27
RC3H2-208	ENST00000478216	KIF2B	Q8N4N8	673 aa		13.35	□□□□□ -0.27
RC3H2-208	ENST00000478216	MARVELD2	Q8N4S9	558 aa		13.35	□□□□□ -0.27
RC3H2-208	ENST00000478216	CCDC89	Q8N998	374 aa		13.35	□□□□□ -0.27
RC3H2-208	ENST00000478216	POGLUT1	Q8NBL1	392 aa		13.35	□□□□□ -0.27
RC3H2-208	ENST00000478216	CAMKV	Q8NCB2	501 aa		13.35	□□□□□ -0.27
RC3H2-208	ENST00000478216	OR5M3	Q8NGP4	307 aa		13.35	□□□□□ -0.27
RC3H2-208	ENST00000478216	ZNF480	Q8WV37	535 aa		13.35	□□□□□ -0.27
RC3H2-208	ENST00000478216	TSLP	Q969D9	159 aa		13.35	□□□□□ -0.27
RC3H2-208	ENST00000478216	SLC24A3	Q9HC58	644 aa		13.35	□□□□□ -0.27
RC3H2-208	ENST00000478216	CCM2L	Q9NUG4	571 aa	Predicted RBP	13.35	□□□□□ -0.27
RC3H2-208	ENST00000478216	ZNF148	Q9UQR1	794 aa		13.35	□□□□□ -0.27
RC3H2-208	ENST00000478216	CRYL1	Q9Y2S2	319 aa		13.35	□□□□□ -0.27
RC3H2-208	ENST00000478216	ZFHX3	Q15911	3703 aa		13.35	□□□□□ -0.27
RC3H2-208	ENST00000478216	GOLGA8K	D6RF30	607 aa		13.34	□□□□□ -0.27
RC3H2-208	ENST00000478216	GOLGA8T	H3BQL2	631 aa		13.34	□□□□□ -0.27
RC3H2-208	ENST00000478216	KLRC4-KLRK1	H3BQV0	150 aa		13.34	□□□□□ -0.27
RC3H2-208	ENST00000478216	KIF5C	O60282	957 aa		13.34	□□□□□ -0.27
RC3H2-208	ENST00000478216	VAPB	O95292	243 aa		13.34	□□□□□ -0.27
RC3H2-208	ENST00000478216	ESR1	P03372	595 aa		13.34	□□□□□ -0.27
RC3H2-208	ENST00000478216	IGFBP2	P18065	325 aa		13.34	□□□□□ -0.27
RC3H2-208	ENST00000478216	NMBR	P28336	390 aa		13.34	□□□□□ -0.27
RC3H2-208	ENST00000478216	STIP1	P31948	543 aa	Known RBP	13.34	□□□□□ -0.27
RC3H2-208	ENST00000478216	SNRPN	P63162	240 aa	Known RBP	13.34	□□□□□ -0.27
RC3H2-208	ENST00000478216	RELA	Q04206	551 aa		13.34	□□□□□ -0.27
RC3H2-208	ENST00000478216	CEBPE	Q15744	281 aa		13.34	□□□□□ -0.27
RC3H2-208	ENST00000478216	TTLL9	Q3SXZ7	439 aa		13.34	□□□□□ -0.27
RC3H2-208	ENST00000478216	SHISA5	Q8N114	240 aa		13.34	□□□□□ -0.27
RC3H2-208	ENST00000478216	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
RC3H2-208	ENST00000478216	OR10Q1	Q8NGQ4	319 aa		13.34	□□□□□ -0.27
RC3H2-208	ENST00000478216	LILRB4	Q8NHJ6	448 aa		13.34	□□□□□ -0.27
RC3H2-208	ENST00000478216	FOXC2	Q99958	501 aa		13.34	□□□□□ -0.27
RC3H2-208	ENST00000478216	CCDC177	Q9NQR7	707 aa	Predicted RBP	13.34	□□□□□ -0.27
RC3H2-208	ENST00000478216	DNAJB12	Q9NXW2	375 aa	Known RBP	13.34	□□□□□ -0.27
RC3H2-208	ENST00000478216	PACSIN2	Q9UNF0	486 aa	Predicted RBP	13.34	□□□□□ -0.27
RC3H2-208	ENST00000478216	NAALAD2	Q9Y3Q0	740 aa		13.34	□□□□□ -0.27
RC3H2-208	ENST00000478216	DUSP10	Q9Y6W6	482 aa		13.34	□□□□□ -0.27
RC3H2-208	ENST00000478216	TCRBV7S2A1N4T	A0A589	114 aa		13.33	□□□□□ -0.28
RC3H2-208	ENST00000478216	MAGEB17	A8MXT2	336 aa		13.33	□□□□□ -0.28
RC3H2-208	ENST00000478216		E7ENX8	843 aa		13.33	□□□□□ -0.28
RC3H2-208	ENST00000478216	SLC35G6	P0C7Q6	338 aa		13.33	□□□□□ -0.28
RC3H2-208	ENST00000478216	TFEB	P19484	476 aa		13.33	□□□□□ -0.28
RC3H2-208	ENST00000478216	JAK1	P23458	1154 aa		13.33	□□□□□ -0.28
RC3H2-208	ENST00000478216	RHAG	Q02094	409 aa		13.33	□□□□□ -0.28
RC3H2-208	ENST00000478216	TAP2	Q03519	686 aa		13.33	□□□□□ -0.28
RC3H2-208	ENST00000478216	PMPCA	Q10713	525 aa		13.33	□□□□□ -0.28
RC3H2-208	ENST00000478216	KCNJ11	Q14654	390 aa		13.33	□□□□□ -0.28
RC3H2-208	ENST00000478216	TMEM214	Q6NUQ4	689 aa	Known RBP	13.33	□□□□□ -0.28
RC3H2-208	ENST00000478216	ARHGAP11A	Q6P4F7	1023 aa		13.33	□□□□□ -0.28
RC3H2-208	ENST00000478216	VN1R4	Q7Z5H5	301 aa		13.33	□□□□□ -0.28
RC3H2-208	ENST00000478216	PRUNE1	Q86TP1	453 aa		13.33	□□□□□ -0.28
RC3H2-208	ENST00000478216	ASPG	Q86U10	573 aa		13.33	□□□□□ -0.28
RC3H2-208	ENST00000478216	REXO1L1P	Q8IX06	675 aa		13.33	□□□□□ -0.28
RC3H2-208	ENST00000478216	LPGAT1	Q92604	370 aa		13.33	□□□□□ -0.28
RC3H2-208	ENST00000478216	ALKBH8	Q96BT7	664 aa	Known RBP	13.33	□□□□□ -0.28
RC3H2-208	ENST00000478216	SEC16B	Q96JE7	1060 aa		13.33	□□□□□ -0.28
RC3H2-208	ENST00000478216	BIRC8	Q96P09	236 aa		13.33	□□□□□ -0.28
RC3H2-208	ENST00000478216	POLDIP3	Q9BY77	421 aa	Known RBP	13.33	□□□□□ -0.28
RC3H2-208	ENST00000478216	TMEM184C	Q9NVA4	438 aa		13.33	□□□□□ -0.28
RC3H2-208	ENST00000478216	BFAR	Q9NZS9	450 aa		13.33	□□□□□ -0.28
RC3H2-208	ENST00000478216	SCN2A	Q99250	2005 aa		13.33	□□□□□ -0.28
RC3H2-208	ENST00000478216	FAM237B	A0A1B0GVD1	139 aa		13.32	□□□□□ -0.28
RC3H2-208	ENST00000478216	FEZF1	A0PJY2	475 aa		13.32	□□□□□ -0.28
RC3H2-208	ENST00000478216	FAM221A	A4D161	298 aa		13.32	□□□□□ -0.28
RC3H2-208	ENST00000478216	GRID2IP	A4D2P6	1211 aa		13.32	□□□□□ -0.28
RC3H2-208	ENST00000478216	MIF4GD	A9UHW6	222 aa	Known RBP	13.32	□□□□□ -0.28
RC3H2-208	ENST00000478216	PEX1	O43933	1283 aa		13.32	□□□□□ -0.28
RC3H2-208	ENST00000478216	B4GALT2	O60909	372 aa		13.32	□□□□□ -0.28
RC3H2-208	ENST00000478216	FAM155B	O75949	473 aa		13.32	□□□□□ -0.28
RC3H2-208	ENST00000478216	TOX	O94900	526 aa		13.32	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms