RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 SYTL3Q4VX76 610 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 MFSD4BQ5TF39 518 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 E4F1Q66K89 784 aaPredicted RBP6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 PACS1Q6VY07 963 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 KIAA0408Q6ZU52 694 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 TAS2R42Q7RTR8 314 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 PID1Q7Z2X4 250 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 ZNF567Q8N184 647 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 OR9A4Q8NGU2 314 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 CFAP61Q8NHU2 1237 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 ENOX1Q8TC92 643 aaKnown RBP6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 DACH2Q96NX9 599 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 GORASP1Q9BQQ3 440 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 RAB11FIP5Q9BXF6 653 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 FSD1LQ9BXM9 530 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 GSX2Q9BZM3 304 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 AIPL1Q9NZN9 384 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 ZNF629Q9UEG4 869 aaPredicted RBP6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 MTRF1LQ9UGC7 380 aaKnown RBP6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 ACAD8Q9UKU7 415 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 DUSP10Q9Y6W6 482 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 LRRC53A6NM62 1247 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 FAM166BA8MTA8 275 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 MAGEB17A8MXT2 336 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 FCHO1O14526 889 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 TXNDC9O14530 226 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 APOL1O14791 398 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 SLC16A5O15375 505 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 P2RX6O15547 441 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 VPS26AO75436 327 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 PROSCO94903 275 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 SOX30O94993 753 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 NSA2O95478 260 aaKnown RBP6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 STATHP02808 62 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 TUBB4AP04350 444 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 RPN2P04844 631 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 TPM2P07951 284 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 NID1P14543 1247 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 GABRA1P14867 456 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 ZFXP17010 805 aaPredicted RBP6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 CYLC1P35663 651 aaPredicted RBP6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 BCL6P41182 706 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 CSE1LP55060 971 aaKnown RBP6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 OR4D2P58180 307 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 RELAQ04206 551 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 UBXN1Q04323 297 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 HSPA14Q0VDF9 509 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 ITIH4Q14624 930 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 TYSND1Q2T9J0 566 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 CCSMST1Q4G0I0 132 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 OXLD1Q5BKU9 147 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 CT47A1Q5JQC4 288 aaPredicted RBP6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 WLSQ5T9L3 541 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 KIAA0930Q6ICG6 404 aaPredicted RBP6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 DENND5AQ6IQ26 1287 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 ZNF425Q6IV72 752 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 PRSS41Q7RTY9 318 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 SLC22A16Q86VW1 577 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 VSIG1Q86XK7 387 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 CYP4Z2PQ8N1L4 340 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 TMEM251Q8N6I4 163 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 TNIP2Q8NFZ5 429 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 TFB1MQ8WVM0 346 aaKnown RBP6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 TSLPQ969D9 159 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 KIAA1191Q96A73 305 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 RAD51AP1Q96B01 352 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 SARAFQ96BY9 339 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 CDKN2AIPNLQ96HQ2 116 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 DNAJC1Q96KC8 554 aaKnown RBP6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 VAT1Q99536 393 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 C19orf24Q9BVV8 132 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 TTTY12Q9BZ98 90 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 LANCL2Q9NS86 450 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 ALKBH4Q9NXW9 302 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 JKAMPQ9P055 326 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 IMPACTQ9P2X3 320 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 SAE1Q9UBE0 346 aaPredicted RBP6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 PCDHGB3Q9Y5G1 929 aa6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 CHD3Q12873 2000 aaKnown RBP6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 PHF3Q92576 2039 aaKnown RBP6.81□□□□□ -1.32
SPTLC1-205ENST00000477888 SNRNP200O75643 2136 aaKnown RBP6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 MPDZO75970 2070 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 DNAJC13O75165 2243 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 A0A087X1B8 175 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 A0A0G2JMM0 328 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 A0A1W2PPB8 328 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 A0A1W2PRS3 328 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 LRRD1A4D1F6 860 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 KRT87PA6NCN2 255 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 KIR3DP1A8MWS1 328 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 ACOT7O00154 380 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 TLX2O43763 284 aaPredicted RBP6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 OR1I1O60431 355 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 C1orf105O95561 183 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 CELA3AP09093 270 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 OR56A5P0C7T3 313 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 SKILP12757 684 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 PKMP14618 531 aaKnown RBP6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 PAX1P15863 534 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 ENDOUP21128 410 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms