RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 TMEM220Q6QAJ8 160 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 KDELC1Q6UW63 502 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 IGFL3Q6UXB1 125 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 Q6YL49 198 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 Q6ZS92 163 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 PPP1R32Q7Z5V6 425 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 AMZ2Q86W34 360 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 KCNMB4Q86W47 210 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 KMT5CQ86Y97 462 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 THNSL2Q86YJ6 484 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 TMEM126BQ8IUX1 230 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 BEND2Q8NDZ0 799 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 PPP1R14CQ8TAE6 165 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 FLVCR1-AS1Q8TAF5 88 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 CCHCR1Q8TD31 782 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 C5orf34Q96MH7 638 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 AGAP3Q96P47 875 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 OLFM3Q96PB7 478 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 CD180Q99467 661 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 ZNF670Q9BS34 389 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 SLC29A3Q9BZD2 475 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 GPR63Q9BZJ6 419 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 REXO4Q9GZR2 422 aaKnown RBP4.41□□□□□ -1.7
CKS1B-207ENST00000477676 WWP1Q9H0M0 922 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 SLC25A51Q9H1U9 297 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 ACTR5Q9H9F9 607 aaPredicted RBP4.41□□□□□ -1.7
CKS1B-207ENST00000477676 FAM60AQ9NP50 221 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 SLC22A11Q9NSA0 550 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 IL17CQ9P0M4 197 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 SLC24A2Q9UI40 661 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 ANAPC7Q9UJX3 599 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 POMT2Q9UKY4 750 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 G3BP2Q9UN86 482 aaKnown RBP4.41□□□□□ -1.7
CKS1B-207ENST00000477676 SNX7Q9UNH6 387 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 B3GNT3Q9Y2A9 372 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 SCINQ9Y6U3 715 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 TLN2Q9Y4G6 2542 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 PHF3Q92576 2039 aaKnown RBP4.41□□□□□ -1.7
CKS1B-207ENST00000477676 RTTNQ86VV8 2226 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 CENPVL1A0A0U1RR11 272 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 LOC285095A0A1B0GVY8 99 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 BTN3A1O00481 513 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 ZNF749O43361 778 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 LDB2O43679 373 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 PMPCBO75439 489 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 LY86O95711 162 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 NDST3O95803 873 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 GASTP01350 101 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 TPBGLP0DKB5 382 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 MYBL1P10243 752 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 DESP17661 470 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 KDELR1P24390 212 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 PTPN3P26045 913 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 PRDX3P30048 256 aaKnown RBP4.4□□□□□ -1.71
CKS1B-207ENST00000477676 OTX2P32243 289 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 CXCR5P32302 372 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 LSP1P33241 339 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 HMGCLP35914 325 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 SOX8P57073 446 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 GSDMDP57764 484 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 MEF2AQ02078 507 aaPredicted RBP4.4□□□□□ -1.71
CKS1B-207ENST00000477676 KLHL30Q0D2K2 578 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 Q0VFX4 171 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 WASHC5Q12768 1159 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 MSLNQ13421 630 aaPredicted RBP4.4□□□□□ -1.71
CKS1B-207ENST00000477676 OLIG2Q13516 323 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 ZRSR2Q15696 482 aaKnown RBP4.4□□□□□ -1.71
CKS1B-207ENST00000477676 KYNUQ16719 465 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 DEFB110Q30KQ9 67 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 SIRPB2Q5JXA9 342 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 DCAF10Q5QP82 559 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 CCDC122Q5T0U0 273 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 C1orf189Q5VU69 101 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 SLC9A4Q6AI14 798 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 PPP1R2P3Q6NXS1 205 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 FAM180AQ6UWF9 173 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 FAM151BQ6UXP7 276 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 CDHR3Q6ZTQ4 885 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 MED25Q71SY5 747 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 DET1Q7L5Y6 550 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 TRIM73Q86UV7 250 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 NT5DC3Q86UY8 548 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 MCEMP1Q8IX19 187 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 ADGRF3Q8IZF5 1079 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 IQCKQ8N0W5 287 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 GALNT16Q8N428 558 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 CCNYQ8ND76 341 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 ST6GALNAC3Q8NDV1 305 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 DDHD1Q8NEL9 900 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 OR4E2Q8NGC2 313 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 OR8K5Q8NH50 307 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 ZFP28Q8NHY6 868 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 GRHL3Q8TE85 626 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 OXNAD1Q96HP4 312 aaPredicted RBP4.4□□□□□ -1.71
CKS1B-207ENST00000477676 PKNOX2Q96KN3 472 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 C12orf66Q96MD2 445 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 GBP5Q96PP8 586 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 RNF157Q96PX1 679 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 TRAPPC9Q96Q05 1148 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 SPATA5L1Q9BVQ7 753 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms