RNA–Protein interactions for RNA: ENST00000477200.1

PIKFYVE-209, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 3

Gene PIKFYVE, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-209ENST00000477200 MKLN1Q9UL63 735 aa4.31□□□□□ -1.72
PIKFYVE-209ENST00000477200 COPS3Q9UNS2 423 aa4.31□□□□□ -1.72
PIKFYVE-209ENST00000477200 MAN2B2Q9Y2E5 1009 aa4.31□□□□□ -1.72
PIKFYVE-209ENST00000477200 RPH3AQ9Y2J0 694 aaPredicted RBP4.31□□□□□ -1.72
PIKFYVE-209ENST00000477200 MRPS17Q9Y2R5 130 aaKnown RBP4.31□□□□□ -1.72
PIKFYVE-209ENST00000477200 TBX22Q9Y458 520 aa4.31□□□□□ -1.72
PIKFYVE-209ENST00000477200 HS3ST3B1Q9Y662 390 aa4.31□□□□□ -1.72
PIKFYVE-209ENST00000477200 COPG1Q9Y678 874 aaKnown RBP4.31□□□□□ -1.72
PIKFYVE-209ENST00000477200 FKBP7Q9Y680 259 aa4.31□□□□□ -1.72
PIKFYVE-209ENST00000477200 AP1M2Q9Y6Q5 423 aa4.31□□□□□ -1.72
PIKFYVE-209ENST00000477200 HSPE1-MOB4S4R3N1 261 aa4.31□□□□□ -1.72
PIKFYVE-209ENST00000477200 PPLO60437 1756 aa4.31□□□□□ -1.72
PIKFYVE-209ENST00000477200 DDX60Q8IY21 1712 aaKnown RBP4.31□□□□□ -1.72
PIKFYVE-209ENST00000477200 RAPGEF6Q8TEU7 1601 aa4.31□□□□□ -1.72
PIKFYVE-209ENST00000477200 ZNFX1Q9P2E3 1918 aaKnown RBP4.31□□□□□ -1.72
PIKFYVE-209ENST00000477200 NUP153P49790 1475 aaKnown RBP4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 DCCP43146 1447 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 C4AP0C0L4 1744 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 C4BP0C0L5 1744 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 NFASCO94856 1347 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 IGSF1Q8N6C5 1336 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 OR6C74A6NCV1 312 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 LINC00587B1AMM8 73 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 KRBOX1C9JBD0 128 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 E7EWF7 191 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 H0Y626 953 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 PER2O15055 1255 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 PHGDHO43175 533 aaKnown RBP4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 CHMP2AO43633 222 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 EIF1BO60739 113 aaKnown RBP4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 USP12O75317 370 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 SNAPC5O75971 98 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 CCNB2O95067 398 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 PTBP3O95758 552 aaKnown RBP4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 GH2P01242 217 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 RB1P06400 928 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 CSF1RP07333 972 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 RBP1P09455 135 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 H2AFZP0C0S5 128 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 WEE2P0C1S8 567 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 SUPT20HL2P0C7V6 817 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 DHRS4L1P0CG22 281 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 SAGP10523 405 aaPredicted RBP4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 MYL2P10916 166 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 MYCLP12524 364 aaPredicted RBP4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 PRG2P13727 222 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 GNSP15586 552 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 CREB1P16220 341 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 TSHRP16473 764 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 IFNAR1P17181 557 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 RORAP35398 523 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 ETV5P41161 510 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 EIF1P41567 113 aaKnown RBP4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 CCR10P46092 362 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 CAPZA2P47755 286 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 PCP4P48539 62 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 PSMD8P48556 350 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 ALDH7A1P49419 539 aaKnown RBP4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 CPT1AP50416 773 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 PGDP52209 483 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 OR2B6P58173 313 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 EIF3EP60228 445 aaKnown RBP4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 CDKL1Q00532 357 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 PSG6Q00889 435 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 IL1RL1Q01638 556 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 DNASE1L3Q13609 305 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 KCNJ11Q14654 390 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 STARD3Q14849 445 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 SEC23BQ15437 767 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 CCNG2Q16589 344 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 LY6KQ17RY6 165 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 IQCCQ4KMZ1 466 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 AARDQ4LEZ3 155 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 INO80DQ53TQ3 878 aaPredicted RBP4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 ZNF484Q5JVG2 852 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 PDSS1Q5T2R2 415 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 ARL6IP4Q66PJ3 421 aaKnown RBP4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 PNCKQ6P2M8 343 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 TMEM81Q6P7N7 255 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 CNSTQ6PJW8 725 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 C16orf89Q6UX73 402 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 ZYG11AQ6WRX3 759 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 USP45Q70EL2 814 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 H2AFVQ71UI9 128 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 PRPF39Q86UA1 669 aaKnown RBP4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 AMIGO1Q86WK6 493 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 TBC1D10CQ8IV04 446 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 LGI2Q8N0V4 545 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 SCML4Q8N228 414 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 SFRP1Q8N474 314 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 PCDH20Q8N6Y1 951 aaKnown RBP4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 ANKFN1Q8N957 763 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 POC5Q8NA72 575 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 SLC37A3Q8NCC5 494 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 LPCAT1Q8NF37 534 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 CMASQ8NFW8 434 aaPredicted RBP4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 JDP2Q8WYK2 163 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 ELMO1Q92556 727 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 PROX1Q92786 737 aa4.3□□□□□ -1.72
PIKFYVE-209ENST00000477200 ATOH1Q92858 354 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms