RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 MIEF2Q96C03 454 aa12.76□□□□□ -0.37
ACTN4-205ENST00000477174 SEC16BQ96JE7 1060 aa12.76□□□□□ -0.37
ACTN4-205ENST00000477174 VPS50Q96JG6 964 aa12.76□□□□□ -0.37
ACTN4-205ENST00000477174 ATOH8Q96SQ7 321 aa12.76□□□□□ -0.37
ACTN4-205ENST00000477174 PAFAH2Q99487 392 aa12.76□□□□□ -0.37
ACTN4-205ENST00000477174 MACROD1Q9BQ69 325 aa12.76□□□□□ -0.37
ACTN4-205ENST00000477174 TXLNGYQ9BZA5 131 aa12.76□□□□□ -0.37
ACTN4-205ENST00000477174 CD244Q9BZW8 370 aa12.76□□□□□ -0.37
ACTN4-205ENST00000477174 EHD1Q9H4M9 534 aa12.76□□□□□ -0.37
ACTN4-205ENST00000477174 MKKSQ9NPJ1 570 aaPredicted RBP12.76□□□□□ -0.37
ACTN4-205ENST00000477174 SEMA3GQ9NS98 782 aa12.76□□□□□ -0.37
ACTN4-205ENST00000477174 DNAJC11Q9NVH1 559 aa12.76□□□□□ -0.37
ACTN4-205ENST00000477174 P4HTMQ9NXG6 502 aa12.76□□□□□ -0.37
ACTN4-205ENST00000477174 NUDT4Q9NZJ9 180 aa12.76□□□□□ -0.37
ACTN4-205ENST00000477174 TRPC4Q9UBN4 977 aa12.76□□□□□ -0.37
ACTN4-205ENST00000477174 MAP2K7O14733 419 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 RIPK2O43353 540 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 ZNF500O60304 480 aaPredicted RBP12.75□□□□□ -0.37
ACTN4-205ENST00000477174 CEACAM4O75871 244 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 FAM153BP0C7A2 387 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 COL6A2P12110 1019 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 GSTM2P28161 218 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 GMPRP36959 345 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 MAGEA12P43365 314 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 HSPA7P48741 367 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 CCL11P51671 97 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 REEP5Q00765 189 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 KLC1Q07866 573 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 NFATC3Q12968 1075 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 ATP1A4Q13733 1029 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 HERC3Q15034 1050 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 FAM153CQ494X1 144 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 ATG9BQ674R7 924 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 NIPAL1Q6NVV3 410 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 PPP1R32Q7Z5V6 425 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 TMPRSS11BQ86T26 416 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 AMER3Q8N944 861 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 KCT2Q8NC54 265 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 ZNF740Q8NDX6 193 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 TTLQ8NG68 377 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 UHMK1Q8TAS1 419 aaKnown RBP12.75□□□□□ -0.37
ACTN4-205ENST00000477174 NT5CQ8TCD5 201 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 DCAKDQ8WVC6 231 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 KCTD4Q8WVF5 259 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 GPR78Q96P69 363 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 TMEM79Q9BSE2 394 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 YIPF2Q9BWQ6 316 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 TRIM55Q9BYV6 548 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 NT5DC2Q9H857 520 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 ANKHQ9HCJ1 492 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 MLXIPLQ9NP71 852 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 C14orf105Q9NVL8 296 aa12.75□□□□□ -0.37
ACTN4-205ENST00000477174 PCDHGA9Q9Y5G4 932 aaKnown RBP12.75□□□□□ -0.37
ACTN4-205ENST00000477174 EXOC1LA0A1B0GW35 172 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 URADA6NGE7 173 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 AGPSO00116 658 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 PCDH17O14917 1159 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 CLGNO14967 610 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 NDUFS4O43181 175 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 DNAJB5O75953 348 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 STATHP02808 62 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 SERPINA6P08185 405 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 SNRPAP09012 282 aaKnown RBP12.74□□□□□ -0.37
ACTN4-205ENST00000477174 MTHFD2P13995 350 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 IL10P22301 178 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 VARSP26640 1264 aaKnown RBP12.74□□□□□ -0.37
ACTN4-205ENST00000477174 SOX8P57073 446 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 FOXL2P58012 376 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 SKP1P63208 163 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 IRF9Q00978 393 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 RGS1Q08116 209 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 PCDH1Q08174 1060 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 SLC29A2Q14542 456 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 RBBP5Q15291 538 aaKnown RBP12.74□□□□□ -0.37
ACTN4-205ENST00000477174 PDK4Q16654 411 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 LACTB2Q53H82 288 aaPredicted RBP12.74□□□□□ -0.37
ACTN4-205ENST00000477174 VWA2Q5GFL6 755 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 DCAF10Q5QP82 559 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 TEX35Q5T0J7 233 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 ADGRD1Q6QNK2 874 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 KIRREL2Q6UWL6 708 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 TMIGD1Q6UXZ0 262 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 LRRC70Q7Z2Q7 622 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 KRT78Q8N1N4 520 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 AFAP1L2Q8N4X5 818 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 ANKRD53Q8N9V6 530 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 CLEC1AQ8NC01 280 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 OR9A4Q8NGU2 314 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 MTBPQ96DY7 904 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 WDR34Q96EX3 536 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 CCDC77Q9BR77 488 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 CRB3Q9BUF7 120 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 VPS11Q9H270 941 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 SPNS1Q9H2V7 528 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 SOX17Q9H6I2 414 aaPredicted RBP12.74□□□□□ -0.37
ACTN4-205ENST00000477174 CLK4Q9HAZ1 481 aaKnown RBP12.74□□□□□ -0.37
ACTN4-205ENST00000477174 COPG2Q9UBF2 871 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 FETUBQ9UGM5 382 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 C3orf18Q9UK00 162 aa12.74□□□□□ -0.37
ACTN4-205ENST00000477174 G3BP2Q9UN86 482 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms