RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 NSG1A0A0A6YYJ2 146 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 FITM1A5D6W6 292 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 H3BMH7 237 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 MSTNO14793 375 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 GSC2O15499 205 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 SUN1O94901 812 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 SLCO2B1O94956 709 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 METTL18O95568 372 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 UMODP07911 640 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 PAMP19021 973 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 FBLP22087 321 aaKnown RBP6.92□□□□□ -1.3
BRCA1-214ENST00000477152 NPY2RP49146 381 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 CSE1LP55060 971 aaKnown RBP6.92□□□□□ -1.3
BRCA1-214ENST00000477152 TEKQ02763 1124 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 ZIC1Q15915 447 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 PCID2Q5JVF3 399 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 WASHC2DQ5SRD0 308 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 FAM69BQ5VUD6 431 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 GARNL3Q5VVW2 1013 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 MRNIPQ6NTE8 343 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 CNSTQ6PJW8 725 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 NDUFAF7Q7L592 441 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 CUZD1Q86UP6 607 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 TICAM1Q8IUC6 712 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 LMNTD1Q8N9Z9 388 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 GABPB2Q8TAK5 448 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-214ENST00000477152 HMGCLL1Q8TB92 370 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 MCOLN3Q8TDD5 553 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 CABS1Q96KC9 395 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 BARD1Q99728 777 aaKnown RBP6.92□□□□□ -1.3
BRCA1-214ENST00000477152 EBNA1BP2Q99848 306 aaKnown RBP6.92□□□□□ -1.3
BRCA1-214ENST00000477152 FAM118BQ9BPY3 351 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 TMEM121Q9BTD3 319 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 TSGA10Q9BZW7 698 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 RIC8BQ9NVN3 520 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 BFARQ9NZS9 450 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 ABI3Q9P2A4 366 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 PLAGL1Q9UM63 463 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 OSGIN2Q9Y236 505 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 TCAF1Q9Y4C2 921 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 PRSS21Q9Y6M0 314 aa6.92□□□□□ -1.3
BRCA1-214ENST00000477152 USP9YO00507 2555 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-214ENST00000477152 TCRBV16S1A1N1A0A5B0 115 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 FER1L5A0AVI2 2057 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 SOCS6O14544 535 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 CD3EAPO15446 510 aaKnown RBP6.91□□□□□ -1.3
BRCA1-214ENST00000477152 LRRTM2O43300 516 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 GPC4O75487 556 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 IFNB1P01574 187 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 CYC1P08574 325 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 RPS3P23396 243 aaKnown RBP eCLIP6.91□□□□□ -1.3
BRCA1-214ENST00000477152 AOAHP28039 575 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 ATP5DP30049 168 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 CCR7P32248 378 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 RPA3P35244 121 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-214ENST00000477152 EMP2P54851 167 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 VSX2P58304 361 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-214ENST00000477152 GUCY1A3Q02108 690 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 ACVR1Q04771 509 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 ARHGAP19Q14CB8 494 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 ZRSR2Q15696 482 aaKnown RBP6.91□□□□□ -1.3
BRCA1-214ENST00000477152 TTLL9Q3SXZ7 439 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 ANKRD20A4Q4UJ75 823 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 CCDC38Q502W7 563 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 THAP5Q7Z6K1 395 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 RNF10Q8N5U6 811 aaKnown RBP6.91□□□□□ -1.3
BRCA1-214ENST00000477152 FLVCR1-AS1Q8TAF5 88 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 SLC35B2Q8TB61 432 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 GRHL3Q8TE85 626 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 METTL21AQ8WXB1 218 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 MAGEB10Q96LZ2 347 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-214ENST00000477152 ZFYVE21Q9BQ24 234 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 IL22Q9GZX6 179 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 CHST11Q9NPF2 352 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 MKKSQ9NPJ1 570 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-214ENST00000477152 C19orf25Q9UFG5 118 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-214ENST00000477152 C3orf18Q9UK00 162 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 TTC7AQ9ULT0 858 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-214ENST00000477152 KLK4Q9Y5K2 254 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 HS3ST3B1Q9Y662 390 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 VSTM2BA6NLU5 285 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 E5RI56 91 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 JRKO75564 520 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 BMP10O95393 424 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 MED26O95402 600 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 CLDN1O95832 211 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 CATP04040 527 aaKnown RBP6.91□□□□□ -1.3
BRCA1-214ENST00000477152 EIF2S1P05198 315 aaKnown RBP6.91□□□□□ -1.3
BRCA1-214ENST00000477152 HEXBP07686 556 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 APRTP07741 180 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 ZGLP1P0C6A0 271 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 HRH2P25021 359 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 ELAVL4P26378 380 aaKnown RBP6.91□□□□□ -1.3
BRCA1-214ENST00000477152 GRIA3P42263 894 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 AVPR1BP47901 424 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 LAPTM5Q13571 262 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 KIRREL2Q6UWL6 708 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 RPTNQ6XPR3 784 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 GSTA5Q7RTV2 222 aa6.91□□□□□ -1.3
BRCA1-214ENST00000477152 EID3Q8N140 333 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms