RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 TOR3AQ9H497 397 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 TPT1P8Q9HAU6 139 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 STON1Q9Y6Q2 735 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 MID1O15344 667 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 CPSF4O95639 269 aaKnown RBP11.05□□□□□ -0.64
NUP188-205ENST00000477069 PCCBP05166 539 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 MEF2AQ02078 507 aaPredicted RBP11.05□□□□□ -0.64
NUP188-205ENST00000477069 CAMK2GQ13555 558 aaPredicted RBP11.05□□□□□ -0.64
NUP188-205ENST00000477069 VEZF1Q14119 521 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 SHHQ15465 462 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 ZIK1Q3SY52 487 aaPredicted RBP11.05□□□□□ -0.64
NUP188-205ENST00000477069 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.05□□□□□ -0.64
NUP188-205ENST00000477069 ANXA8L1Q5VT79 327 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 METRNLQ641Q3 311 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 AMZ2Q86W34 360 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 DCUN1D3Q8IWE4 304 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 CLEC4FQ8N1N0 589 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 METTL4Q8N3J2 472 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 OR10Q1Q8NGQ4 319 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 CDC26Q8NHZ8 85 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 WDR48Q8TAF3 677 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 IL17FQ96PD4 163 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 RBM4BQ9BQ04 359 aaKnown RBP11.05□□□□□ -0.64
NUP188-205ENST00000477069 DPH2Q9BQC3 489 aaPredicted RBP11.05□□□□□ -0.64
NUP188-205ENST00000477069 RBM4Q9BWF3 364 aaKnown RBP11.05□□□□□ -0.64
NUP188-205ENST00000477069 REEP4Q9H6H4 257 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 IL1RAPQ9NPH3 570 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 TMEFF2Q9UIK5 374 aaPredicted RBP11.05□□□□□ -0.64
NUP188-205ENST00000477069 XIRP2A4UGR9 3374 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 TICRRQ7Z2Z1 1910 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 PLXND1Q9Y4D7 1925 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 PI15O43692 258 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 SEC24DO94855 1032 aaPredicted RBP11.05□□□□□ -0.64
NUP188-205ENST00000477069 TBX6O95947 436 aaPredicted RBP11.05□□□□□ -0.64
NUP188-205ENST00000477069 FURINP09958 794 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 KELP23276 732 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 KDELR2P33947 212 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 MVDP53602 400 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 LRRC74AQ0VAA2 488 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 MPEG1Q2M385 716 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 PRAMEF14Q5SWL7 426 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 CCNYL2Q5T2Q4 361 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 PRAMEF13Q5VWM6 474 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 B3GNT6Q6ZMB0 384 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 CBLL1Q75N03 491 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 OR5K2Q8NHB8 316 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 RAD51AP1Q96B01 352 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 MYNNQ9NPC7 610 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 TM7SF3Q9NS93 570 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 FAM118AQ9NWS6 357 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 SERGEFQ9UGK8 458 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 PLAGL1Q9UM63 463 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 ABCG2Q9UNQ0 655 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 ASF1AQ9Y294 204 aa11.05□□□□□ -0.64
NUP188-205ENST00000477069 DOCK9Q9BZ29 2069 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 TMEM229AB2RXF0 380 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 EFNA1P20827 205 aaPredicted RBP11.04□□□□□ -0.64
NUP188-205ENST00000477069 TEAD1P28347 426 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 PIGAP37287 484 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 VAC14Q08AM6 782 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 EPS8Q12929 822 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 PLCL1Q15111 1095 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 CST6Q15828 149 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 FAM71E1Q6IPT2 247 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 SHQ1Q6PI26 577 aaKnown RBP11.04□□□□□ -0.64
NUP188-205ENST00000477069 LRRTM4Q86VH4 590 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 ZNF740Q8NDX6 193 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 RNF217Q8TC41 542 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 MYADMQ96S97 322 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 NRTNQ99748 197 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 NPLQ9BXD5 320 aaPredicted RBP11.04□□□□□ -0.64
NUP188-205ENST00000477069 PBX4Q9BYU1 374 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 OR51B5Q9H339 312 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 GPATCH2Q9NW75 528 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 DNMT3AQ9Y6K1 912 aaPredicted RBP11.04□□□□□ -0.64
NUP188-205ENST00000477069 COL4A2P08572 1712 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 GNG14A0A1W2PPG7 69 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 LINC01565O15544 149 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 NOBOXO60393 691 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 TGFB1P01137 390 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 NUDT7P0C024 238 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 SLC5A2P31639 672 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 FGL2Q14314 439 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 ARHGAP19Q14CB8 494 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 RGNQ15493 299 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 CYP2A13Q16696 494 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 PRSS53Q2L4Q9 553 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 IQCCQ4KMZ1 466 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 SPESP1Q6UW49 350 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 ZDHHC21Q8IVQ6 265 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 PNPT1Q8TCS8 783 aaKnown RBP11.04□□□□□ -0.64
NUP188-205ENST00000477069 C16orf78Q8WTQ4 265 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 SDCCAG3Q96C92 435 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 MBNL1Q9NR56 388 aaKnown RBP11.04□□□□□ -0.64
NUP188-205ENST00000477069 FZD4Q9ULV1 537 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 CORO2BQ9UQ03 480 aa11.04□□□□□ -0.64
NUP188-205ENST00000477069 TRPM6Q9BX84 2022 aa11.03□□□□□ -0.64
NUP188-205ENST00000477069 RANBP2P49792 3224 aaKnown RBP11.03□□□□□ -0.64
NUP188-205ENST00000477069 PPIBP23284 216 aaKnown RBP11.03□□□□□ -0.64
NUP188-205ENST00000477069 HLCSP50747 726 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms