RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 ADAMTS17Q8TE56 1095 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 UBTD2Q8WUN7 234 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 SLC13A3Q8WWT9 602 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 CAVIN3Q969G5 261 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 MTBPQ96DY7 904 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 THAP11Q96EK4 314 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 MYCBPQ99417 103 aaPredicted RBP9.22□□□□□ -0.93
HDAC3-208ENST00000476739 DPH2Q9BQC3 489 aaPredicted RBP9.22□□□□□ -0.93
HDAC3-208ENST00000476739 AICDAQ9GZX7 198 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 RASSF4Q9H2L5 321 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 FAM53CQ9NYF3 392 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 GPRC5BQ9NZH0 403 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 CPSF2Q9P2I0 782 aaKnown RBP9.22□□□□□ -0.93
HDAC3-208ENST00000476739 RAB21Q9UL25 225 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 MGAQ8IWI9 3026 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 SYCE1LA8MT33 242 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 VGLL3A8MV65 326 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 C4orf51C9J302 202 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 C9J4A7 227 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 MASP2O00187 686 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 NDUFS4O43181 175 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 DNAJB6O75190 326 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 TBX6O95947 436 aaPredicted RBP9.21□□□□□ -0.94
HDAC3-208ENST00000476739 SERPIND1P05546 499 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 UMODP07911 640 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 PYGBP11216 843 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 COL6A2P12110 1019 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 GFAPP14136 432 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 IL1RNP18510 177 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 MAT1AQ00266 395 aaKnown RBP9.21□□□□□ -0.94
HDAC3-208ENST00000476739 RHDQ02161 417 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 CHIT1Q13231 466 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 DOC2AQ14183 400 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 RBBP5Q15291 538 aaKnown RBP9.21□□□□□ -0.94
HDAC3-208ENST00000476739 NKG7Q16617 165 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 PDK4Q16654 411 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 UGT8Q16880 541 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 CRTC2Q53ET0 693 aaPredicted RBP9.21□□□□□ -0.94
HDAC3-208ENST00000476739 VWA2Q5GFL6 755 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 GARNL3Q5VVW2 1013 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 EMBQ6PCB8 327 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 RPS27LQ71UM5 84 aaKnown RBP9.21□□□□□ -0.94
HDAC3-208ENST00000476739 OVCH1Q7RTY7 1134 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 LRRC70Q7Z2Q7 622 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 SYVN1Q86TM6 617 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 PDSS2Q86YH6 399 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 HOMEZQ8IX15 550 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.21□□□□□ -0.94
HDAC3-208ENST00000476739 TEX9Q8N6V9 391 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 AMER3Q8N944 861 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 CAMKVQ8NCB2 501 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 OR9A4Q8NGU2 314 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 CREB3L4Q8TEY5 395 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 COL26A1Q96A83 441 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 PHF21BQ96EK2 531 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 MMABQ96EY8 250 aaPredicted RBP9.21□□□□□ -0.94
HDAC3-208ENST00000476739 SCYL1Q96KG9 808 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 SPSB2Q99619 263 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 AIF1LQ9BQI0 150 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 CCDC77Q9BR77 488 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 MESP1Q9BRJ9 268 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 SEMA4CQ9C0C4 833 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 KLHL31Q9H511 634 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 SOX17Q9H6I2 414 aaPredicted RBP9.21□□□□□ -0.94
HDAC3-208ENST00000476739 CNOT10Q9H9A5 744 aaKnown RBP9.21□□□□□ -0.94
HDAC3-208ENST00000476739 ZNF304Q9HCX3 659 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 ACSS2Q9NR19 701 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 GPN3Q9UHW5 284 aaPredicted RBP9.21□□□□□ -0.94
HDAC3-208ENST00000476739 ZFP69BQ9UJL9 534 aa9.21□□□□□ -0.94
HDAC3-208ENST00000476739 ZNF490Q9ULM2 529 aaPredicted RBP9.21□□□□□ -0.94
HDAC3-208ENST00000476739 PTRH2Q9Y3E5 179 aaKnown RBP9.21□□□□□ -0.94
HDAC3-208ENST00000476739 TLDC2A0PJX2 215 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 VSTM2BA6NLU5 285 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 K7EPI3 171 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 SGK494L7N484 410 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 E2F3O00716 465 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 TXNDC9O14530 226 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 WFS1O76024 890 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 RBP1P09455 135 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 NUDT17P0C025 328 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 FAM87AP0C7U9 286 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 EEF1DP29692 281 aaKnown RBP9.2□□□□□ -0.94
HDAC3-208ENST00000476739 OTX2P32243 289 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 AHRP35869 848 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 HNF4AP41235 474 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 EFNA3P52797 238 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 ALDH18A1P54886 795 aaKnown RBP9.2□□□□□ -0.94
HDAC3-208ENST00000476739 MC1RQ01726 317 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 CHAF1BQ13112 559 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 FAM53BQ14153 422 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 E2F2Q14209 437 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 LY6DQ14210 128 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 PCBP2Q15366 365 aaKnown RBP eCLIP9.2□□□□□ -0.94
HDAC3-208ENST00000476739 TSNAXIP1Q2TAA8 658 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 SOWAHCQ53LP3 525 aaPredicted RBP9.2□□□□□ -0.94
HDAC3-208ENST00000476739 XKR6Q5GH73 641 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 PRMT9Q6P2P2 845 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 LAPTM4BQ86VI4 370 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 TDRPQ86YL5 185 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 PRSS58Q8IYP2 241 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms