RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 ZNF468Q5VIY5 522 aaPredicted RBP6.62□□□□□ -1.35
HDAC3-207ENST00000475549 PLAG1Q6DJT9 500 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 SPINK14Q6IE38 97 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 CAPN13Q6MZZ7 669 aaPredicted RBP6.62□□□□□ -1.35
HDAC3-207ENST00000475549 UGT3A1Q6NUS8 523 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 FAM180AQ6UWF9 173 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 LCTLQ6UWM7 567 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 CPEB2Q7Z5Q1 589 aaKnown RBP6.62□□□□□ -1.35
HDAC3-207ENST00000475549 ANKRD37Q7Z713 158 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 PCGF5Q86SE9 256 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 ASPGQ86U10 573 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 FJX1Q86VR8 437 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 TICAM1Q8IUC6 712 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 BEST3Q8N1M1 668 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 AFAP1L2Q8N4X5 818 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 BCORP1Q8N888 145 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 ANKRD53Q8N9V6 530 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 MFSD9Q8NBP5 474 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 OR56A3Q8NH54 315 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 ZCCHC10Q8TBK6 192 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 CALML6Q8TD86 181 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 SLC13A3Q8WWT9 602 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 NR4A3Q92570 626 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 SLCO2A1Q92959 643 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 RELTQ969Z4 430 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 ALKBH8Q96BT7 664 aaKnown RBP6.62□□□□□ -1.35
HDAC3-207ENST00000475549 THAP11Q96EK4 314 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 LINGO1Q96FE5 620 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 SNF8Q96H20 258 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 VPS50Q96JG6 964 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 MAGEB10Q96LZ2 347 aaPredicted RBP6.62□□□□□ -1.35
HDAC3-207ENST00000475549 OLFM1Q99784 485 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 FAM167BQ9BTA0 163 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 SARGQ9BW04 601 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 HES7Q9BYE0 225 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 AICDAQ9GZX7 198 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 RNF32Q9H0A6 362 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 PCBD2Q9H0N5 130 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 DDX47Q9H0S4 455 aaKnown RBP6.62□□□□□ -1.35
HDAC3-207ENST00000475549 CCDC68Q9H2F9 335 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 KCNF1Q9H3M0 494 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 RIC8BQ9NVN3 520 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 UTP6Q9NYH9 597 aaKnown RBP6.62□□□□□ -1.35
HDAC3-207ENST00000475549 TAS2R13Q9NYV9 303 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 TRMT6Q9UJA5 497 aaKnown RBP6.62□□□□□ -1.35
HDAC3-207ENST00000475549 SNX12Q9UMY4 172 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 VWA7Q9Y334 891 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 NAALAD2Q9Y3Q0 740 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 PSAT1Q9Y617 370 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 SLC22A7Q9Y694 548 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 CCDC88CQ9P219 2028 aa6.62□□□□□ -1.35
HDAC3-207ENST00000475549 C2orf72A6NCS6 295 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 OR5H15A6NDH6 313 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 USP27XA6NNY8 438 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 C4orf51C9J302 202 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 DNALI1O14645 258 aaPredicted RBP6.61□□□□□ -1.35
HDAC3-207ENST00000475549 FANCGO15287 622 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 PRPF4O43172 522 aaKnown RBP eCLIP6.61□□□□□ -1.35
HDAC3-207ENST00000475549 CHST10O43529 356 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 GALR3O60755 368 aaPredicted RBP6.61□□□□□ -1.35
HDAC3-207ENST00000475549 PIAS1O75925 651 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 UNC5CO95185 931 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 ICAM2P13598 275 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 GRNP28799 593 aaKnown RBP6.61□□□□□ -1.35
HDAC3-207ENST00000475549 CD96P40200 585 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 OLR1P78380 273 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 PMP22Q01453 160 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 ZNF33BQ06732 778 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 SP140Q13342 867 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 TUBA3CQ13748 450 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 PPP1R7Q15435 360 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 CDSNQ15517 529 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 NDUFA9Q16795 377 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 PPP1R3AQ16821 1122 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 BTBD16Q32M84 506 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 BBS9Q3SYG4 887 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 DEFB134Q4QY38 66 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 SFT2D3Q587I9 215 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 RNFT1Q5M7Z0 435 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 SPANXN3Q5MJ09 141 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 HECTD2Q5U5R9 776 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 ABHD17BQ5VST6 288 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 DUPD1Q68J44 220 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 SP5Q6BEB4 398 aaPredicted RBP6.61□□□□□ -1.35
HDAC3-207ENST00000475549 TUBA3EQ6PEY2 450 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 SBSNQ6UWP8 590 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 GALNT7Q86SF2 657 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 C17orf64Q86WR6 236 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 ZNF227Q86WZ6 799 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 CREG2Q8IUH2 290 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 MDS2Q8NDY4 140 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 PLPP5Q8NEB5 264 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 METTL21AQ8WXB1 218 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 TSLPQ969D9 159 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 NEIL2Q969S2 332 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 CERS2Q96G23 380 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 PEX11GQ96HA9 241 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 SIGLEC12Q96PQ1 595 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 NAP1L3Q99457 506 aaPredicted RBP6.61□□□□□ -1.35
HDAC3-207ENST00000475549 MCMBPQ9BTE3 642 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms