RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 AIF1LQ9BQI0 150 aa22.8■■□□□ 1.24
CPNE1-223ENST00000475146 SPNS1Q9H2V7 528 aa22.8■■□□□ 1.24
CPNE1-223ENST00000475146 ACSS3Q9H6R3 686 aa22.8■■□□□ 1.24
CPNE1-223ENST00000475146 ANKHQ9HCJ1 492 aa22.8■■□□□ 1.24
CPNE1-223ENST00000475146 MLXIPLQ9NP71 852 aa22.8■■□□□ 1.24
CPNE1-223ENST00000475146 CD274Q9NZQ7 290 aa22.8■■□□□ 1.24
CPNE1-223ENST00000475146 RNF112Q9ULX5 631 aa22.8■■□□□ 1.24
CPNE1-223ENST00000475146 ZNF451Q9Y4E5 1061 aa22.8■■□□□ 1.24
CPNE1-223ENST00000475146 CFAP46Q8IYW2 2715 aa22.8■■□□□ 1.24
CPNE1-223ENST00000475146 TNRC6AQ8NDV7 1962 aaKnown RBP22.8■■□□□ 1.24
CPNE1-223ENST00000475146 H0YIG0 161 aa22.79■■□□□ 1.24
CPNE1-223ENST00000475146 ALOX12BO75342 701 aa22.79■■□□□ 1.24
CPNE1-223ENST00000475146 NSA2O95478 260 aaKnown RBP22.79■■□□□ 1.24
CPNE1-223ENST00000475146 ECHS1P30084 290 aa22.79■■□□□ 1.24
CPNE1-223ENST00000475146 SLC6A12P48065 614 aa22.79■■□□□ 1.24
CPNE1-223ENST00000475146 TUBB8Q3ZCM7 444 aa22.79■■□□□ 1.24
CPNE1-223ENST00000475146 KIRREL2Q6UWL6 708 aa22.79■■□□□ 1.24
CPNE1-223ENST00000475146 PRSS41Q7RTY9 318 aa22.79■■□□□ 1.24
CPNE1-223ENST00000475146 SARGQ9BW04 601 aa22.79■■□□□ 1.24
CPNE1-223ENST00000475146 ALG9Q9H6U8 611 aa22.79■■□□□ 1.24
CPNE1-223ENST00000475146 CNOT10Q9H9A5 744 aaKnown RBP22.79■■□□□ 1.24
CPNE1-223ENST00000475146 ATP13A2Q9NQ11 1180 aa22.79■■□□□ 1.24
CPNE1-223ENST00000475146 MAP2K7O14733 419 aa22.78■■□□□ 1.24
CPNE1-223ENST00000475146 TFEBP19484 476 aa22.78■■□□□ 1.24
CPNE1-223ENST00000475146 CASRP41180 1078 aa22.78■■□□□ 1.24
CPNE1-223ENST00000475146 SCTRP47872 440 aa22.78■■□□□ 1.24
CPNE1-223ENST00000475146 EMP2P54851 167 aa22.78■■□□□ 1.24
CPNE1-223ENST00000475146 RBBP5Q15291 538 aaKnown RBP22.78■■□□□ 1.24
CPNE1-223ENST00000475146 FBXO48Q5FWF7 155 aa22.78■■□□□ 1.24
CPNE1-223ENST00000475146 SULT1C3Q6IMI6 304 aa22.78■■□□□ 1.24
CPNE1-223ENST00000475146 LAPTM4BQ86VI4 370 aa22.78■■□□□ 1.24
CPNE1-223ENST00000475146 ZC3H7AQ8IWR0 971 aaKnown RBP22.78■■□□□ 1.24
CPNE1-223ENST00000475146 KLHDC8AQ8IYD2 350 aa22.78■■□□□ 1.24
CPNE1-223ENST00000475146 GALNT16Q8N428 558 aa22.78■■□□□ 1.24
CPNE1-223ENST00000475146 MOCOSQ96EN8 888 aa22.78■■□□□ 1.24
CPNE1-223ENST00000475146 TMEM79Q9BSE2 394 aa22.78■■□□□ 1.24
CPNE1-223ENST00000475146 EPN3Q9H201 632 aa22.78■■□□□ 1.24
CPNE1-223ENST00000475146 NMRAL1Q9HBL8 299 aa22.78■■□□□ 1.24
CPNE1-223ENST00000475146 HCN3Q9P1Z3 774 aa22.78■■□□□ 1.24
CPNE1-223ENST00000475146 ZFP69BQ9UJL9 534 aa22.78■■□□□ 1.24
CPNE1-223ENST00000475146 PCDHGB7Q9Y5F8 929 aa22.78■■□□□ 1.24
CPNE1-223ENST00000475146 IDSB3KWA1 339 aa22.77■■□□□ 1.24
CPNE1-223ENST00000475146 SGK494L7N484 410 aa22.77■■□□□ 1.24
CPNE1-223ENST00000475146 TAPBPO15533 448 aa22.77■■□□□ 1.24
CPNE1-223ENST00000475146 HEXBP07686 556 aa22.77■■□□□ 1.24
CPNE1-223ENST00000475146 LTA4HP09960 611 aaKnown RBP22.77■■□□□ 1.24
CPNE1-223ENST00000475146 ACPPP15309 386 aa22.77■■□□□ 1.24
CPNE1-223ENST00000475146 GNAZP19086 355 aa22.77■■□□□ 1.24
CPNE1-223ENST00000475146 ITGA3P26006 1051 aa22.77■■□□□ 1.24
CPNE1-223ENST00000475146 VARSP26640 1264 aaKnown RBP22.77■■□□□ 1.24
CPNE1-223ENST00000475146 HSPA7P48741 367 aa22.77■■□□□ 1.24
CPNE1-223ENST00000475146 TLE1Q04724 770 aa22.77■■□□□ 1.24
CPNE1-223ENST00000475146 RGS1Q08116 209 aa22.77■■□□□ 1.24
CPNE1-223ENST00000475146 DLG1Q12959 904 aa22.77■■□□□ 1.24
CPNE1-223ENST00000475146 CDC16Q13042 620 aa22.77■■□□□ 1.24
CPNE1-223ENST00000475146 AIMP2Q13155 320 aaKnown RBP22.77■■□□□ 1.24
CPNE1-223ENST00000475146 PWP1Q13610 501 aa22.77■■□□□ 1.24
CPNE1-223ENST00000475146 MYBPC3Q14896 1274 aa22.77■■□□□ 1.24
CPNE1-223ENST00000475146 CDKL4Q5MAI5 379 aa22.77■■□□□ 1.24
CPNE1-223ENST00000475146 VWA5B1Q5TIE3 1220 aa22.77■■□□□ 1.24
CPNE1-223ENST00000475146 OR11G2Q8NGC1 345 aa22.77■■□□□ 1.24
CPNE1-223ENST00000475146 STAG3L4Q8TBR4 150 aa22.77■■□□□ 1.24
CPNE1-223ENST00000475146 TGIF2Q9GZN2 237 aa22.77■■□□□ 1.24
CPNE1-223ENST00000475146 SNX15Q9NRS6 342 aa22.77■■□□□ 1.24
CPNE1-223ENST00000475146 DNAJC11Q9NVH1 559 aa22.77■■□□□ 1.24
CPNE1-223ENST00000475146 ACOT9Q9Y305 439 aa22.77■■□□□ 1.24
CPNE1-223ENST00000475146 NUP210LQ5VU65 1888 aa22.77■■□□□ 1.24
CPNE1-223ENST00000475146 BOD1L1Q8NFC6 3051 aa22.76■■□□□ 1.23
CPNE1-223ENST00000475146 A0A087X1B8 175 aa22.76■■□□□ 1.23
CPNE1-223ENST00000475146 SUPT3HB4E1H0 165 aa22.76■■□□□ 1.23
CPNE1-223ENST00000475146 SUPT3HO75486 399 aa22.76■■□□□ 1.23
CPNE1-223ENST00000475146 IPO13O94829 963 aaKnown RBP22.76■■□□□ 1.23
CPNE1-223ENST00000475146 KLHL18O94889 574 aa22.76■■□□□ 1.23
CPNE1-223ENST00000475146 INHBAP08476 426 aa22.76■■□□□ 1.23
CPNE1-223ENST00000475146 AHRP35869 848 aa22.76■■□□□ 1.23
CPNE1-223ENST00000475146 MFSD4BQ5TF39 518 aa22.76■■□□□ 1.23
CPNE1-223ENST00000475146 FAAH2Q6GMR7 532 aa22.76■■□□□ 1.23
CPNE1-223ENST00000475146 SNX31Q8N9S9 440 aa22.76■■□□□ 1.23
CPNE1-223ENST00000475146 PDPRQ8NCN5 879 aa22.76■■□□□ 1.23
CPNE1-223ENST00000475146 KCTD4Q8WVF5 259 aa22.76■■□□□ 1.23
CPNE1-223ENST00000475146 ESAMQ96AP7 390 aa22.76■■□□□ 1.23
CPNE1-223ENST00000475146 C8orf44Q96CB5 159 aa22.76■■□□□ 1.23
CPNE1-223ENST00000475146 SMAD5Q99717 465 aaKnown RBP22.76■■□□□ 1.23
CPNE1-223ENST00000475146 MESP1Q9BRJ9 268 aa22.76■■□□□ 1.23
CPNE1-223ENST00000475146 IGSF5Q9NSI5 407 aa22.76■■□□□ 1.23
CPNE1-223ENST00000475146 NFU1Q9UMS0 254 aa22.76■■□□□ 1.23
CPNE1-223ENST00000475146 NAALAD2Q9Y3Q0 740 aa22.76■■□□□ 1.23
CPNE1-223ENST00000475146 SLC22A7Q9Y694 548 aa22.76■■□□□ 1.23
CPNE1-223ENST00000475146 ZNF860A6NHJ4 632 aa22.75■■□□□ 1.23
CPNE1-223ENST00000475146 KLHL41O60662 606 aa22.75■■□□□ 1.23
CPNE1-223ENST00000475146 H2AFYO75367 372 aaKnown RBP22.75■■□□□ 1.23
CPNE1-223ENST00000475146 RDH16O75452 317 aa22.75■■□□□ 1.23
CPNE1-223ENST00000475146 STK16O75716 305 aa22.75■■□□□ 1.23
CPNE1-223ENST00000475146 ALPPP05187 535 aa22.75■■□□□ 1.23
CPNE1-223ENST00000475146 RHOXF2BP0C7M4 288 aa22.75■■□□□ 1.23
CPNE1-223ENST00000475146 C1GALT1C1LP0DN25 315 aa22.75■■□□□ 1.23
CPNE1-223ENST00000475146 CXCR2P25025 360 aa22.75■■□□□ 1.23
CPNE1-223ENST00000475146 SERPINB8P50452 374 aa22.75■■□□□ 1.23
CPNE1-223ENST00000475146 IRF9Q00978 393 aa22.75■■□□□ 1.23
CPNE1-223ENST00000475146 HERC3Q15034 1050 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms