RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 METTL27Q8N6F8 245 aaPredicted RBP11.83□□□□□ -0.52
DDX56-209ENST00000473924 TRPV3Q8NET8 790 aa11.83□□□□□ -0.52
DDX56-209ENST00000473924 MYRIPQ8NFW9 859 aa11.83□□□□□ -0.52
DDX56-209ENST00000473924 TTLQ8NG68 377 aa11.83□□□□□ -0.52
DDX56-209ENST00000473924 CCT6BQ92526 530 aa11.83□□□□□ -0.52
DDX56-209ENST00000473924 TM4SF19Q96DZ7 209 aa11.83□□□□□ -0.52
DDX56-209ENST00000473924 APOPT1Q96IL0 206 aa11.83□□□□□ -0.52
DDX56-209ENST00000473924 GBP5Q96PP8 586 aa11.83□□□□□ -0.52
DDX56-209ENST00000473924 PITHD1Q9GZP4 211 aaPredicted RBP11.83□□□□□ -0.52
DDX56-209ENST00000473924 DRC3Q9H069 523 aa11.83□□□□□ -0.52
DDX56-209ENST00000473924 ENAMQ9NRM1 1142 aa11.83□□□□□ -0.52
DDX56-209ENST00000473924 SENP1Q9P0U3 644 aa11.83□□□□□ -0.52
DDX56-209ENST00000473924 CDC14AQ9UNH5 594 aa11.83□□□□□ -0.52
DDX56-209ENST00000473924 MAP1BP46821 2468 aaKnown RBP11.82□□□□□ -0.52
DDX56-209ENST00000473924 URADA6NGE7 173 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 GOLGA6L10A6NI86 522 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 PRPF4O43172 522 aaKnown RBP eCLIP11.82□□□□□ -0.52
DDX56-209ENST00000473924 PLIN3O60664 434 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 SPAG7O75391 227 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 PROCP04070 461 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 CASP2P42575 452 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 GCGRP47871 477 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 OR1D4P47884 311 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 CCNG1P51959 295 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 HERVK_113P63132 956 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 CXADRP78310 365 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 NFKB2Q00653 900 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 PWP1Q13610 501 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 TBCCQ15814 346 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 RBBP7Q16576 425 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 ARHGAP40Q5TG30 622 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 ZNF385CQ66K41 422 aaPredicted RBP11.82□□□□□ -0.52
DDX56-209ENST00000473924 LCN10Q6JVE6 187 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 PRMT9Q6P2P2 845 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 C19orf48Q6RUI8 117 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 ZNF517Q6ZMY9 492 aaPredicted RBP11.82□□□□□ -0.52
DDX56-209ENST00000473924 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.82□□□□□ -0.52
DDX56-209ENST00000473924 BANPQ8N9N5 519 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 ANKRD53Q8N9V6 530 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 KCT2Q8NC54 265 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 ZCCHC10Q8TBK6 192 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 UBE2E3Q969T4 207 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 COL26A1Q96A83 441 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 CCDC126Q96EE4 140 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 WDR34Q96EX3 536 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 MVB12AQ96EY5 273 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 MMABQ96EY8 250 aaPredicted RBP11.82□□□□□ -0.52
DDX56-209ENST00000473924 C10orf90Q96M02 699 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 ERVK-6Q9BXR3 956 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 GPR87Q9BY21 358 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 NT5DC2Q9H857 520 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 NOL11Q9H8H0 719 aaKnown RBP11.82□□□□□ -0.52
DDX56-209ENST00000473924 CPNE5Q9HCH3 593 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 ZNF304Q9HCX3 659 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 SEMA4BQ9NPR2 832 aaPredicted RBP11.82□□□□□ -0.52
DDX56-209ENST00000473924 IL17BQ9UHF5 180 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 MID2Q9UJV3 735 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 PCTPQ9UKL6 214 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 EMCNQ9ULC0 261 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 FARSAQ9Y285 508 aaKnown RBP11.82□□□□□ -0.52
DDX56-209ENST00000473924 MAU2Q9Y6X3 613 aa11.82□□□□□ -0.52
DDX56-209ENST00000473924 A0A0A6YYC8 382 aaPredicted RBP11.81□□□□□ -0.52
DDX56-209ENST00000473924 I3L1I5 382 aaPredicted RBP11.81□□□□□ -0.52
DDX56-209ENST00000473924 EFSO43281 561 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 UGDHO60701 494 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 PRAMEF4O60810 478 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 WFS1O76024 890 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 SUPT7LO94864 414 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 MED26O95402 600 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 RPS17P08708 135 aaKnown RBP11.81□□□□□ -0.52
DDX56-209ENST00000473924 CD63P08962 238 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 RAB40ALP0C0E4 278 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 PCNAP12004 261 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 CPA3P15088 417 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 CD22P20273 847 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 IMPDH1P20839 514 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 GSTM2P28161 218 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 PTPN4P29074 926 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 HNF4AP41235 474 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 AVPR1BP47901 424 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 VAC14Q08AM6 782 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 FAM53BQ14153 422 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 CASP8Q14790 479 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 PRAMEF9Q5VWM5 478 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 LIPJQ5W064 366 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 GRHL2Q6ISB3 625 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 TMEM214Q6NUQ4 689 aaKnown RBP11.81□□□□□ -0.52
DDX56-209ENST00000473924 MED27Q6P2C8 311 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 FAM198BQ6UWH4 519 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 ZYG11AQ6WRX3 759 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 ABHD13Q7L211 337 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 DTWD1Q8N5C7 304 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 ENDOVQ8N8Q3 282 aaKnown RBP11.81□□□□□ -0.52
DDX56-209ENST00000473924 ARMC2Q8NEN0 867 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 RDH11Q8TC12 318 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 NT5CQ8TCD5 201 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.81□□□□□ -0.52
DDX56-209ENST00000473924 STARD8Q92502 1023 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 MOCOSQ96EN8 888 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 SEC16BQ96JE7 1060 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms