RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 GABARAPL3Q9BY60 117 aa20.36■□□□□ 0.85
COL18A1-207ENST00000473212 ABCB8Q9NUT2 735 aa20.36■□□□□ 0.85
COL18A1-207ENST00000473212 DNAJC11Q9NVH1 559 aa20.36■□□□□ 0.85
COL18A1-207ENST00000473212 FZD4Q9ULV1 537 aa20.36■□□□□ 0.85
COL18A1-207ENST00000473212 TESMINQ9Y4I5 508 aa20.36■□□□□ 0.85
COL18A1-207ENST00000473212 ISPDA4D126 451 aa20.36■□□□□ 0.85
COL18A1-207ENST00000473212 E7EQ34 232 aa20.36■□□□□ 0.85
COL18A1-207ENST00000473212 RFPL2O75678 378 aa20.36■□□□□ 0.85
COL18A1-207ENST00000473212 CSNK2BP67870 215 aa20.36■□□□□ 0.85
COL18A1-207ENST00000473212 VEPH1Q14D04 833 aa20.36■□□□□ 0.85
COL18A1-207ENST00000473212 ZNF362Q5T0B9 420 aaPredicted RBP20.36■□□□□ 0.85
COL18A1-207ENST00000473212 CCDC103Q8IW40 242 aa20.36■□□□□ 0.85
COL18A1-207ENST00000473212 HS6ST3Q8IZP7 471 aa20.36■□□□□ 0.85
COL18A1-207ENST00000473212 CBARPQ8N350 705 aaPredicted RBP20.36■□□□□ 0.85
COL18A1-207ENST00000473212 TCAIMQ8N3R3 496 aa20.36■□□□□ 0.85
COL18A1-207ENST00000473212 SCRN2Q96FV2 425 aa20.36■□□□□ 0.85
COL18A1-207ENST00000473212 TRMT2BQ96GJ1 504 aaKnown RBP20.36■□□□□ 0.85
COL18A1-207ENST00000473212 ZNF232Q9UNY5 417 aa20.36■□□□□ 0.85
COL18A1-207ENST00000473212 ATP11BQ9Y2G3 1177 aa20.36■□□□□ 0.85
COL18A1-207ENST00000473212 PCDHB11Q9Y5F2 797 aa20.36■□□□□ 0.85
COL18A1-207ENST00000473212 LOC100506127A0A0U1RQW1 187 aa20.35■□□□□ 0.85
COL18A1-207ENST00000473212 SUV39H1O43463 412 aa20.35■□□□□ 0.85
COL18A1-207ENST00000473212 SOCS5O75159 536 aa20.35■□□□□ 0.85
COL18A1-207ENST00000473212 OPN1SWP03999 348 aa20.35■□□□□ 0.85
COL18A1-207ENST00000473212 GTF2E2P29084 291 aaKnown RBP20.35■□□□□ 0.85
COL18A1-207ENST00000473212 CYP27C1Q4G0S4 372 aa20.35■□□□□ 0.85
COL18A1-207ENST00000473212 DPY19L3Q6ZPD9 716 aa20.35■□□□□ 0.85
COL18A1-207ENST00000473212 GAREM2Q75VX8 874 aa20.35■□□□□ 0.85
COL18A1-207ENST00000473212 CD99L2Q8TCZ2 262 aa20.35■□□□□ 0.85
COL18A1-207ENST00000473212 GGHQ92820 318 aa20.35■□□□□ 0.85
COL18A1-207ENST00000473212 FEVQ99581 238 aa20.35■□□□□ 0.85
COL18A1-207ENST00000473212 PRM3Q9NNZ6 103 aa20.35■□□□□ 0.85
COL18A1-207ENST00000473212 FAM120CQ9NX05 1096 aaKnown RBP20.35■□□□□ 0.85
COL18A1-207ENST00000473212 B4GALT6Q9UBX8 382 aa20.35■□□□□ 0.85
COL18A1-207ENST00000473212 NPIPB8E9PQR5 432 aa20.35■□□□□ 0.85
COL18A1-207ENST00000473212 DSCR3O14972 297 aa20.35■□□□□ 0.85
COL18A1-207ENST00000473212 PQBP1O60828 265 aaKnown RBP20.35■□□□□ 0.85
COL18A1-207ENST00000473212 KCNK2O95069 426 aa20.35■□□□□ 0.85
COL18A1-207ENST00000473212 C8GP07360 202 aa20.35■□□□□ 0.85
COL18A1-207ENST00000473212 SPNP16150 400 aa20.35■□□□□ 0.85
COL18A1-207ENST00000473212 VEZF1Q14119 521 aa20.35■□□□□ 0.85
COL18A1-207ENST00000473212 TBCEQ15813 527 aaPredicted RBP20.35■□□□□ 0.85
COL18A1-207ENST00000473212 ZNF181Q2M3W8 571 aa20.35■□□□□ 0.85
COL18A1-207ENST00000473212 SPOUT1Q5T280 376 aaKnown RBP20.35■□□□□ 0.85
COL18A1-207ENST00000473212 ATAD3BQ5T9A4 648 aa20.35■□□□□ 0.85
COL18A1-207ENST00000473212 OR8J2Q8NGG1 315 aa20.35■□□□□ 0.85
COL18A1-207ENST00000473212 SAMD11Q96NU1 681 aa20.35■□□□□ 0.85
COL18A1-207ENST00000473212 PCDHGB3Q9Y5G1 929 aa20.35■□□□□ 0.85
COL18A1-207ENST00000473212 TAF4O00268 1085 aa20.34■□□□□ 0.85
COL18A1-207ENST00000473212 ABCB1P08183 1280 aaPredicted RBP20.34■□□□□ 0.85
COL18A1-207ENST00000473212 JUPP14923 745 aa20.34■□□□□ 0.85
COL18A1-207ENST00000473212 GABRR2P28476 465 aa20.34■□□□□ 0.85
COL18A1-207ENST00000473212 HLA-FP30511 346 aa20.34■□□□□ 0.85
COL18A1-207ENST00000473212 GGT2P36268 569 aa20.34■□□□□ 0.85
COL18A1-207ENST00000473212 HNMTP50135 292 aa20.34■□□□□ 0.85
COL18A1-207ENST00000473212 SP3Q02447 781 aa20.34■□□□□ 0.85
COL18A1-207ENST00000473212 GAB1Q13480 694 aa20.34■□□□□ 0.85
COL18A1-207ENST00000473212 TPRG1LQ5T0D9 272 aa20.34■□□□□ 0.85
COL18A1-207ENST00000473212 USP43Q70EL4 1123 aa20.34■□□□□ 0.85
COL18A1-207ENST00000473212 TSEN54Q7Z6J9 526 aaKnown RBP20.34■□□□□ 0.85
COL18A1-207ENST00000473212 CPA6Q8N4T0 437 aa20.34■□□□□ 0.85
COL18A1-207ENST00000473212 DNAJC22Q8N4W6 341 aa20.34■□□□□ 0.85
COL18A1-207ENST00000473212 SPPL2AQ8TCT8 520 aa20.34■□□□□ 0.85
COL18A1-207ENST00000473212 MYDGFQ969H8 173 aa20.34■□□□□ 0.85
COL18A1-207ENST00000473212 FCRL1Q96LA6 429 aa20.34■□□□□ 0.85
COL18A1-207ENST00000473212 RAD18Q9NS91 495 aa20.34■□□□□ 0.85
COL18A1-207ENST00000473212 SAGE2PA6NJ88 616 aa20.34■□□□□ 0.85
COL18A1-207ENST00000473212 TMEM229AB2RXF0 380 aa20.34■□□□□ 0.85
COL18A1-207ENST00000473212 M0R129 80 aa20.34■□□□□ 0.85
COL18A1-207ENST00000473212 CDK1P06493 297 aa20.34■□□□□ 0.85
COL18A1-207ENST00000473212 OR56A5P0C7T3 313 aa20.34■□□□□ 0.85
COL18A1-207ENST00000473212 IRF8Q02556 426 aa20.34■□□□□ 0.85
COL18A1-207ENST00000473212 XKR6Q5GH73 641 aa20.34■□□□□ 0.85
COL18A1-207ENST00000473212 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.34■□□□□ 0.85
COL18A1-207ENST00000473212 ASTLQ6HA08 431 aaPredicted RBP20.34■□□□□ 0.85
COL18A1-207ENST00000473212 SLC46A3Q7Z3Q1 461 aa20.34■□□□□ 0.85
COL18A1-207ENST00000473212 GPR156Q8NFN8 814 aa20.34■□□□□ 0.85
COL18A1-207ENST00000473212 OR52J3Q8NH60 311 aa20.34■□□□□ 0.85
COL18A1-207ENST00000473212 DUSP26Q9BV47 211 aa20.34■□□□□ 0.85
COL18A1-207ENST00000473212 OR51E2Q9H255 320 aa20.34■□□□□ 0.85
COL18A1-207ENST00000473212 SUV39H2Q9H5I1 410 aa20.34■□□□□ 0.85
COL18A1-207ENST00000473212 ADPRHL2Q9NX46 363 aa20.34■□□□□ 0.85
COL18A1-207ENST00000473212 GPR83Q9NYM4 423 aa20.34■□□□□ 0.85
COL18A1-207ENST00000473212 VPS29Q9UBQ0 182 aa20.34■□□□□ 0.85
COL18A1-207ENST00000473212 INSL5Q9Y5Q6 135 aa20.34■□□□□ 0.85
COL18A1-207ENST00000473212 CLCA1A8K7I4 914 aa20.33■□□□□ 0.85
COL18A1-207ENST00000473212 TNFRSF11BO00300 401 aa20.33■□□□□ 0.85
COL18A1-207ENST00000473212 SNPHO15079 494 aa20.33■□□□□ 0.85
COL18A1-207ENST00000473212 AOC2O75106 756 aa20.33■□□□□ 0.85
COL18A1-207ENST00000473212 IDH2P48735 452 aaKnown RBP20.33■□□□□ 0.85
COL18A1-207ENST00000473212 TUBA3EQ6PEY2 450 aa20.33■□□□□ 0.85
COL18A1-207ENST00000473212 Q6ZVU0 165 aa20.33■□□□□ 0.85
COL18A1-207ENST00000473212 AKAP14Q86UN6 197 aa20.33■□□□□ 0.85
COL18A1-207ENST00000473212 SYTL1Q8IYJ3 562 aa20.33■□□□□ 0.85
COL18A1-207ENST00000473212 SLC5A8Q8N695 610 aa20.33■□□□□ 0.85
COL18A1-207ENST00000473212 ZNF675Q8TD23 568 aa20.33■□□□□ 0.85
COL18A1-207ENST00000473212 C19orf43Q9BQ61 176 aa20.33■□□□□ 0.85
COL18A1-207ENST00000473212 CDADC1Q9BWV3 514 aa20.33■□□□□ 0.85
COL18A1-207ENST00000473212 BRD9Q9H8M2 597 aa20.33■□□□□ 0.85
COL18A1-207ENST00000473212 RLIMQ9NVW2 624 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms