RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 SHOC2Q9UQ13 582 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 ENTPD4Q9Y227 616 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 AAR2Q9Y312 384 aaKnown RBP3.38□□□□□ -1.87
XRN1-209ENST00000472625 LUC7L2Q9Y383 392 aaKnown RBP3.38□□□□□ -1.87
XRN1-209ENST00000472625 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.38□□□□□ -1.87
XRN1-209ENST00000472625 PLEKHM1Q9Y4G2 1056 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 HEY1Q9Y5J3 304 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 DMRT1Q9Y5R6 373 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 GPR45Q9Y5Y3 372 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 MRFAP1Q9Y605 127 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 DOPEY2Q9Y3R5 2298 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 RP1L1Q8IWN7 2480 aaPredicted RBP3.37□□□□□ -1.87
XRN1-209ENST00000472625 TDRD6O60522 2096 aaKnown RBP3.37□□□□□ -1.87
XRN1-209ENST00000472625 ABCA12Q86UK0 2595 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 IGHV5-51A0A0C4DH38 117 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 C5orf60A6NFR6 353 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 WIPF3A6NGB9 483 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 CYSRT1A8MQ03 144 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 HACD1B0YJ81 288 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 TCP11X1B4DZS4 312 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 TMEM150CB9EJG8 249 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 GOLGA6L19H0YKK7 550 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 KCNK1O00180 336 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 LIN7AO14910 233 aaPredicted RBP3.37□□□□□ -1.87
XRN1-209ENST00000472625 ZSCAN9O15535 394 aaPredicted RBP3.37□□□□□ -1.87
XRN1-209ENST00000472625 PRPF4O43172 522 aaKnown RBP eCLIP3.37□□□□□ -1.87
XRN1-209ENST00000472625 PSTPIP1O43586 416 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 SPOPO43791 374 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 KIF1CO43896 1103 aaKnown RBP3.37□□□□□ -1.87
XRN1-209ENST00000472625 PHF2O75151 1096 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 POP7O75817 140 aaKnown RBP3.37□□□□□ -1.87
XRN1-209ENST00000472625 DNAJB5O75953 348 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 OR2B3O76000 313 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 AP2A2O94973 939 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 LDLRP01130 860 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 GASTP01350 101 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 ELANEP08246 267 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 RBP3P10745 1247 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 BRAFP15056 766 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 FOLR1P15328 257 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 NR1D1P20393 614 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 KDELR1P24390 212 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 IL4RP24394 825 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 TNFRSF8P28908 595 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 ADSLP30566 484 aaPredicted RBP3.37□□□□□ -1.87
XRN1-209ENST00000472625 APOBEC3AP31941 199 aaPredicted RBP3.37□□□□□ -1.87
XRN1-209ENST00000472625 RORAP35398 523 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 DCTP40126 519 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 CETN2P41208 172 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 TSFMP43897 325 aaKnown RBP3.37□□□□□ -1.87
XRN1-209ENST00000472625 CARSP49589 748 aaKnown RBP3.37□□□□□ -1.87
XRN1-209ENST00000472625 PRLHRP49683 370 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 ARSFP54793 590 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 CASP6P55212 293 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 SOX8P57073 446 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 DCDP81605 110 aaKnown RBP3.37□□□□□ -1.87
XRN1-209ENST00000472625 GBE1Q04446 702 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 RBPJQ06330 500 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 FAPQ12884 760 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 ZBTB17Q13105 803 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 GPS2Q13227 327 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 LAMB3Q13751 1172 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 PRPSAP1Q14558 356 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 PCBP2Q15366 365 aaKnown RBP eCLIP3.37□□□□□ -1.87
XRN1-209ENST00000472625 SLC18A3Q16572 532 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 GPR33Q49SQ1 333 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 NADK2Q4G0N4 442 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 ATP13A5Q4VNC0 1218 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 SYTL3Q4VX76 610 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 TEX44Q53QW1 395 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 TCTE1Q5JU00 501 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 DCAF10Q5QP82 559 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 FNBP1LQ5T0N5 605 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 GPRC6AQ5T6X5 926 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 AGAP7PQ5VUJ5 663 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 MBNL2Q5VZF2 373 aaKnown RBP3.37□□□□□ -1.87
XRN1-209ENST00000472625 SLC9A4Q6AI14 798 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 RHBDD2Q6NTF9 364 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 TLDC1Q6P9B6 456 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 TMEM220Q6QAJ8 160 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 FAM180AQ6UWF9 173 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 FAM198BQ6UWH4 519 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 FAM151BQ6UXP7 276 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 B4GALNT4Q76KP1 1039 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 APTXQ7Z2E3 356 aaKnown RBP3.37□□□□□ -1.87
XRN1-209ENST00000472625 GDF7Q7Z4P5 450 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 C11orf96Q7Z7L8 435 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 MRGPRGQ86SM5 289 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 AMIGO1Q86WK6 493 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 TMTC1Q8IUR5 882 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 ZNF547Q8IVP9 402 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 GSPT2Q8IYD1 628 aaKnown RBP3.37□□□□□ -1.87
XRN1-209ENST00000472625 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.37□□□□□ -1.87
XRN1-209ENST00000472625 BCORP1Q8N888 145 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 GPR26Q8NDV2 337 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 FDCSPQ8NFU4 85 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 OR2Y1Q8NGV0 311 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 BLOC1S5Q8TDH9 187 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 P3H4Q92791 437 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 FKBP10Q96AY3 582 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms