RNA–Protein interactions for RNA: ENST00000472524.1

CCDC88B-205, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 2

Gene CCDC88B, Length 779 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-205ENST00000472524 BMP10O95393 424 aa14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 NSA2O95478 260 aaKnown RBP14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 CELA2AP08217 269 aa14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 NPPBP16860 134 aa14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 EFNA3P52797 238 aa14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 AP1S2P56377 157 aa14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 MFAP5Q13361 173 aa14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 FRG1Q14331 258 aaKnown RBP14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 ZXDCQ2QGD7 858 aaPredicted RBP14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 MINDY4Q4G0A6 757 aa14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 DUPD1Q68J44 220 aa14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 TMEM214Q6NUQ4 689 aaKnown RBP14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 TMEM207Q6UWW9 146 aa14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 SLC26A11Q86WA9 606 aa14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 ZBED8Q8IZ13 594 aa14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 SHISA5Q8N114 240 aa14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 SIRT6Q8N6T7 355 aa14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 KCT2Q8NC54 265 aa14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 OR56A3Q8NH54 315 aa14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 BRIX1Q8TDN6 353 aaKnown RBP14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 SLC13A3Q8WWT9 602 aa14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 FBXL8Q96CD0 374 aa14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 BARD1Q99728 777 aaKnown RBP14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 DPH5Q9H2P9 285 aa14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 ANKHQ9HCJ1 492 aa14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 RIC8BQ9NVN3 520 aa14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 RNF14Q9UBS8 474 aa14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 DOPEY1Q5JWR5 2465 aa14.88□□□□□ -0.03
CCDC88B-205ENST00000472524 NPEPPSL1A6NEC2 478 aa14.87□□□□□ -0.03
CCDC88B-205ENST00000472524 E7ESA3 106 aa14.87□□□□□ -0.03
CCDC88B-205ENST00000472524 RDH16O75452 317 aa14.87□□□□□ -0.03
CCDC88B-205ENST00000472524 SLC35G6P0C7Q6 338 aa14.87□□□□□ -0.03
CCDC88B-205ENST00000472524 PRR35P0CG20 571 aa14.87□□□□□ -0.03
CCDC88B-205ENST00000472524 C8orf89P0DMQ9 161 aa14.87□□□□□ -0.03
CCDC88B-205ENST00000472524 ZNF37AP17032 561 aaPredicted RBP14.87□□□□□ -0.03
CCDC88B-205ENST00000472524 CCR8P51685 355 aa14.87□□□□□ -0.03
CCDC88B-205ENST00000472524 ZNF169Q14929 603 aaPredicted RBP14.87□□□□□ -0.03
CCDC88B-205ENST00000472524 PCOLCEQ15113 449 aa14.87□□□□□ -0.03
CCDC88B-205ENST00000472524 SBSNQ6UWP8 590 aa14.87□□□□□ -0.03
CCDC88B-205ENST00000472524 ZC3HC1Q86WB0 502 aaKnown RBP14.87□□□□□ -0.03
CCDC88B-205ENST00000472524 AMER2Q8N7J2 671 aa14.87□□□□□ -0.03
CCDC88B-205ENST00000472524 MFSD9Q8NBP5 474 aa14.87□□□□□ -0.03
CCDC88B-205ENST00000472524 OR51Q1Q8NH59 317 aa14.87□□□□□ -0.03
CCDC88B-205ENST00000472524 METTL21AQ8WXB1 218 aa14.87□□□□□ -0.03
CCDC88B-205ENST00000472524 ATL1Q8WXF7 558 aa14.87□□□□□ -0.03
CCDC88B-205ENST00000472524 TM4SF19Q96DZ7 209 aa14.87□□□□□ -0.03
CCDC88B-205ENST00000472524 C5orf34Q96MH7 638 aa14.87□□□□□ -0.03
CCDC88B-205ENST00000472524 OR4K3Q96R72 315 aa14.87□□□□□ -0.03
CCDC88B-205ENST00000472524 VN1R1Q9GZP7 353 aa14.87□□□□□ -0.03
CCDC88B-205ENST00000472524 POLEQ07864 2286 aa14.87□□□□□ -0.03
CCDC88B-205ENST00000472524 ZNF860A6NHJ4 632 aa14.86□□□□□ -0.03
CCDC88B-205ENST00000472524 CDC7O00311 574 aa14.86□□□□□ -0.03
CCDC88B-205ENST00000472524 NDC80O14777 642 aa14.86□□□□□ -0.03
CCDC88B-205ENST00000472524 PCDH17O14917 1159 aa14.86□□□□□ -0.03
CCDC88B-205ENST00000472524 NDUFS4O43181 175 aa14.86□□□□□ -0.03
CCDC88B-205ENST00000472524 OR1F1O43749 312 aa14.86□□□□□ -0.03
CCDC88B-205ENST00000472524 PIAS1O75925 651 aa14.86□□□□□ -0.03
CCDC88B-205ENST00000472524 SERPINA7P05543 415 aa14.86□□□□□ -0.03
CCDC88B-205ENST00000472524 SERPIND1P05546 499 aa14.86□□□□□ -0.03
CCDC88B-205ENST00000472524 ENO2P09104 434 aaPredicted RBP14.86□□□□□ -0.03
CCDC88B-205ENST00000472524 XCR1P46094 333 aa14.86□□□□□ -0.03
CCDC88B-205ENST00000472524 TAS2R39P59534 338 aa14.86□□□□□ -0.03
CCDC88B-205ENST00000472524 ARG2P78540 354 aa14.86□□□□□ -0.03
CCDC88B-205ENST00000472524 C2orf54Q08AI8 447 aa14.86□□□□□ -0.03
CCDC88B-205ENST00000472524 CDC16Q13042 620 aa14.86□□□□□ -0.03
CCDC88B-205ENST00000472524 CATSPEREQ5SY80 951 aa14.86□□□□□ -0.03
CCDC88B-205ENST00000472524 TMEM205Q6UW68 189 aa14.86□□□□□ -0.03
CCDC88B-205ENST00000472524 LANCL3Q6ZV70 420 aa14.86□□□□□ -0.03
CCDC88B-205ENST00000472524 CATSPER1Q8NEC5 780 aa14.86□□□□□ -0.03
CCDC88B-205ENST00000472524 ABHD11Q8NFV4 315 aa14.86□□□□□ -0.03
CCDC88B-205ENST00000472524 SLC5A11Q8WWX8 675 aa14.86□□□□□ -0.03
CCDC88B-205ENST00000472524 PDLIM5Q96HC4 596 aaKnown RBP14.86□□□□□ -0.03
CCDC88B-205ENST00000472524 TSNARE1Q96NA8 513 aa14.86□□□□□ -0.03
CCDC88B-205ENST00000472524 RBCK1Q9BYM8 510 aa14.86□□□□□ -0.03
CCDC88B-205ENST00000472524 ZNF700Q9H0M5 742 aa14.86□□□□□ -0.03
CCDC88B-205ENST00000472524 MOCS1Q9NZB8 636 aa14.86□□□□□ -0.03
CCDC88B-205ENST00000472524 NAALAD2Q9Y3Q0 740 aa14.86□□□□□ -0.03
CCDC88B-205ENST00000472524 ITPR2Q14571 2701 aa14.86□□□□□ -0.03
CCDC88B-205ENST00000472524 CELSR2Q9HCU4 2923 aa14.85□□□□□ -0.03
CCDC88B-205ENST00000472524 LOC102723996A0A087X1L8 192 aa14.85□□□□□ -0.03
CCDC88B-205ENST00000472524 IGHV3-20A0A0C4DH32 117 aa14.85□□□□□ -0.03
CCDC88B-205ENST00000472524 A0A1W2PQ72 361 aa14.85□□□□□ -0.03
CCDC88B-205ENST00000472524 OR2W5A6NFC9 320 aa14.85□□□□□ -0.03
CCDC88B-205ENST00000472524 RAD51CO43502 376 aa14.85□□□□□ -0.03
CCDC88B-205ENST00000472524 WFS1O76024 890 aa14.85□□□□□ -0.03
CCDC88B-205ENST00000472524 SEC24DO94855 1032 aaPredicted RBP14.85□□□□□ -0.03
CCDC88B-205ENST00000472524 ITGAMP11215 1152 aa14.85□□□□□ -0.03
CCDC88B-205ENST00000472524 TSFMP43897 325 aaKnown RBP14.85□□□□□ -0.03
CCDC88B-205ENST00000472524 CALCOCO2Q13137 446 aa14.85□□□□□ -0.03
CCDC88B-205ENST00000472524 ELOAQ14241 798 aaKnown RBP14.85□□□□□ -0.03
CCDC88B-205ENST00000472524 CSHL1Q14406 222 aa14.85□□□□□ -0.03
CCDC88B-205ENST00000472524 TLR1Q15399 786 aa14.85□□□□□ -0.03
CCDC88B-205ENST00000472524 PPP1R3AQ16821 1122 aa14.85□□□□□ -0.03
CCDC88B-205ENST00000472524 TMPRSS11BQ86T26 416 aa14.85□□□□□ -0.03
CCDC88B-205ENST00000472524 PDSS2Q86YH6 399 aa14.85□□□□□ -0.03
CCDC88B-205ENST00000472524 C17orf53Q8N3J3 647 aaPredicted RBP14.85□□□□□ -0.03
CCDC88B-205ENST00000472524 NKAPQ8N5F7 415 aaKnown RBP14.85□□□□□ -0.03
CCDC88B-205ENST00000472524 TBC1D19Q8N5T2 526 aa14.85□□□□□ -0.03
CCDC88B-205ENST00000472524 BBOF1Q8ND07 529 aa14.85□□□□□ -0.03
CCDC88B-205ENST00000472524 ZNF740Q8NDX6 193 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms