RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 KLRG1Q96E93 195 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 LRFN1Q9P244 771 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 IFT80Q9P2H3 777 aaPredicted RBP12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ILVBLA1L0T0 632 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 A6NL46 340 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 LCP2Q13094 533 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 EOGTQ5NDL2 527 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 KCNIP4Q6PIL6 250 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CERS5Q8N5B7 392 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 TUBB1Q9H4B7 451 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 IL21RQ9HBE5 538 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 TDP1Q9NUW8 608 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 GPRC5BQ9NZH0 403 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 NPIPA2E9PIF3 369 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 NPIPA3F8WFD2 350 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SYN3O14994 580 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SSX4O60224 188 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 GP1BBP13224 206 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SMPD1P17405 629 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ATF6P18850 670 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 MLLT10P55197 1068 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 FAM92BQ6ZTR7 304 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CAMKVQ8NCB2 501 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 OR13C4Q8NGS5 318 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PNPLA2Q96AD5 504 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SUV39H2Q9H5I1 410 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 MAN2B2Q9Y2E5 1009 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 FXYD6-FXYD2A0A087WZ82 144 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ARRB1P49407 418 aaPredicted RBP12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 YBEYP58557 167 aaPredicted RBP12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 RPS14P62263 151 aaKnown RBP12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PITPNAQ00169 270 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 UBE2UQ5VVX9 321 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 EGFLAMQ63HQ2 1017 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CASTOR1Q8WTX7 329 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SPOCK2Q92563 424 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 MSLNLQ96KJ4 702 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 FXYD6Q9H0Q3 95 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ZNF282Q9UDV7 671 aaPredicted RBP12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CDH22Q9UJ99 828 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 TEX51A0A1B0GUA7 166 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 KANTRA0A1W2PQU2 76 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ANKRD33BA6NCL7 494 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 MATN3O15232 486 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 THEGLP0DJG4 465 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 POLR2CP19387 275 aaPredicted RBP12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ATAD3CQ5T2N8 411 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ZNF572Q7Z3I7 529 aaPredicted RBP12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ASPNQ9BXN1 380 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 TDRD6O60522 2096 aaKnown RBP12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 EFCAB9A8MZ26 197 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 GSTM2P28161 218 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ATXN7L3Q14CW9 347 aaPredicted RBP12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 NOMO1Q15155 1222 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 DECR1Q16698 335 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 DLK2Q6UY11 383 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 DOK4Q8TEW6 326 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 HSPBAP1Q96EW2 488 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CCNL2Q96S94 520 aaPredicted RBP12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ACBD6Q9BR61 282 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 P2RX2Q9UBL9 471 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 INSL6Q9Y581 213 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PAQR7Q86WK9 346 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 GKN2Q86XP6 184 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SMPD3Q9NY59 655 aaPredicted RBP12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 MBD5Q9P267 1494 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 AKAP6Q13023 2319 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CNOT4O95628 575 aaKnown RBP12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CD83Q01151 205 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ZNF542PQ5EBM4 170 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PDSS1Q5T2R2 415 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SMYD5Q6GMV2 418 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ART4Q93070 314 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 OR51B6Q9H340 312 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 TBCCD1Q9NVR7 557 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 C1orf109Q9NX04 203 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 A0A1W2PQ45 241 aaPredicted RBP12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 A0A1W2PQY0 241 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 YJEFN3A6XGL0 299 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SOX14O95416 240 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 IFNGR1P15260 489 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PREPP48147 710 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CRHR2Q13324 411 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 LCLAT1Q6UWP7 414 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CEACAM20Q6UY09 585 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SSX3Q99909 188 aa12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 TREX2Q9BQ50 279 aaPredicted RBP12.87□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SH2D7A6NKC9 451 aaPredicted RBP12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 LPLP06858 475 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 OTX2P32243 289 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CCR3P51677 355 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 FKBP1BP68106 108 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CDONQ4KMG0 1287 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 P2RY8Q86VZ1 359 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 C1orf127Q8N9H9 656 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PHC3Q8NDX5 983 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 OR5T1Q8NG75 326 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PTGES2Q9H7Z7 377 aa12.86□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 HTR3EA5X5Y0 456 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms