RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 ZNF425Q6IV72 752 aa6.08□□□□□ -1.44
SMC5-202ENST00000471372 PPP1R42Q7Z4L9 355 aa6.08□□□□□ -1.44
SMC5-202ENST00000471372 PRUNE1Q86TP1 453 aa6.08□□□□□ -1.44
SMC5-202ENST00000471372 PLD3Q8IV08 490 aa6.08□□□□□ -1.44
SMC5-202ENST00000471372 SIDT2Q8NBJ9 832 aaKnown RBP6.08□□□□□ -1.44
SMC5-202ENST00000471372 CLEC18CQ8NCF0 446 aa6.08□□□□□ -1.44
SMC5-202ENST00000471372 OR52N5Q8NH56 324 aa6.08□□□□□ -1.44
SMC5-202ENST00000471372 ZNF473Q8WTR7 871 aaKnown RBP6.08□□□□□ -1.44
SMC5-202ENST00000471372 NTN5Q8WTR8 489 aaPredicted RBP6.08□□□□□ -1.44
SMC5-202ENST00000471372 SMG7Q92540 1137 aaKnown RBP6.08□□□□□ -1.44
SMC5-202ENST00000471372 C14orf79Q96F83 325 aa6.08□□□□□ -1.44
SMC5-202ENST00000471372 EGLN1Q9GZT9 426 aa6.08□□□□□ -1.44
SMC5-202ENST00000471372 SIRPDQ9H106 197 aa6.08□□□□□ -1.44
SMC5-202ENST00000471372 DPEP3Q9H4B8 488 aa6.08□□□□□ -1.44
SMC5-202ENST00000471372 RNF121Q9H920 327 aa6.08□□□□□ -1.44
SMC5-202ENST00000471372 PPANQ9NQ55 473 aaKnown RBP6.08□□□□□ -1.44
SMC5-202ENST00000471372 SDR39U1Q9NRG7 319 aaPredicted RBP6.08□□□□□ -1.44
SMC5-202ENST00000471372 TMOD3Q9NYL9 352 aa6.08□□□□□ -1.44
SMC5-202ENST00000471372 FAM153AQ9UHL3 310 aa6.08□□□□□ -1.44
SMC5-202ENST00000471372 PLA2G4CQ9UP65 541 aa6.08□□□□□ -1.44
SMC5-202ENST00000471372 A0A0U1RRA0 63 aa6.07□□□□□ -1.44
SMC5-202ENST00000471372 A0A1W2PPI3 338 aa6.07□□□□□ -1.44
SMC5-202ENST00000471372 WDR91A4D1P6 747 aa6.07□□□□□ -1.44
SMC5-202ENST00000471372 ASPDHA6ND91 283 aa6.07□□□□□ -1.44
SMC5-202ENST00000471372 M0R296 226 aa6.07□□□□□ -1.44
SMC5-202ENST00000471372 XPNPEP2O43895 674 aa6.07□□□□□ -1.44
SMC5-202ENST00000471372 AK1P00568 194 aa6.07□□□□□ -1.44
SMC5-202ENST00000471372 DARSP14868 501 aaKnown RBP6.07□□□□□ -1.44
SMC5-202ENST00000471372 PRDX6P30041 224 aa6.07□□□□□ -1.44
SMC5-202ENST00000471372 CSTF2P33240 577 aaKnown RBP eCLIP6.07□□□□□ -1.44
SMC5-202ENST00000471372 MDH1P40925 334 aaKnown RBP6.07□□□□□ -1.44
SMC5-202ENST00000471372 SLC6A12P48065 614 aa6.07□□□□□ -1.44
SMC5-202ENST00000471372 PDLIM4P50479 330 aa6.07□□□□□ -1.44
SMC5-202ENST00000471372 ARFIP1P53367 373 aa6.07□□□□□ -1.44
SMC5-202ENST00000471372 TUBA1BP68363 451 aa6.07□□□□□ -1.44
SMC5-202ENST00000471372 RPP38P78345 283 aaKnown RBP6.07□□□□□ -1.44
SMC5-202ENST00000471372 PMP22Q01453 160 aa6.07□□□□□ -1.44
SMC5-202ENST00000471372 KIR2DS3Q14952 304 aa6.07□□□□□ -1.44
SMC5-202ENST00000471372 ARMCX4Q5H9R4 360 aa6.07□□□□□ -1.44
SMC5-202ENST00000471372 CES4AQ5XG92 561 aa6.07□□□□□ -1.44
SMC5-202ENST00000471372 SLC25A24Q6NUK1 477 aa6.07□□□□□ -1.44
SMC5-202ENST00000471372 AMZ2Q86W34 360 aa6.07□□□□□ -1.44
SMC5-202ENST00000471372 PELI3Q8N2H9 469 aa6.07□□□□□ -1.44
SMC5-202ENST00000471372 SLC16A11Q8NCK7 471 aa6.07□□□□□ -1.44
SMC5-202ENST00000471372 GMCL1P1Q8NEA9 526 aa6.07□□□□□ -1.44
SMC5-202ENST00000471372 SLC24A4Q8NFF2 622 aa6.07□□□□□ -1.44
SMC5-202ENST00000471372 ULK4Q96C45 1275 aa6.07□□□□□ -1.44
SMC5-202ENST00000471372 DTNBP1Q96EV8 351 aa6.07□□□□□ -1.44
SMC5-202ENST00000471372 SPAG8Q99932 426 aaPredicted RBP6.07□□□□□ -1.44
SMC5-202ENST00000471372 FGF21Q9NSA1 209 aa6.07□□□□□ -1.44
SMC5-202ENST00000471372 PCDHA7Q9UN72 937 aa6.07□□□□□ -1.44
SMC5-202ENST00000471372 RABL2BQ9UNT1 228 aa6.07□□□□□ -1.44
SMC5-202ENST00000471372 TNNQ9UQP3 1299 aa6.07□□□□□ -1.44
SMC5-202ENST00000471372 ATAD2BQ9ULI0 1458 aa6.07□□□□□ -1.44
SMC5-202ENST00000471372 LOC101059948A0A1B0GTJ6 334 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 C2CD4DB7Z1M9 353 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 F8WDY8 70 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 ZNF197O14709 1029 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 SYNGR3O43761 229 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 PIGNO95427 931 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 CRYABP02511 175 aaKnown RBP6.06□□□□□ -1.44
SMC5-202ENST00000471372 RAF1P04049 648 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 TSPY4P0CV99 314 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 TSPY10P0CW01 314 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 MSH3P20585 1137 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 LHCGRP22888 699 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 GJB2P29033 226 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 ABCG1P45844 678 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 NSFP46459 744 aaKnown RBP6.06□□□□□ -1.44
SMC5-202ENST00000471372 TNFSF10P50591 281 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 MAZP56270 477 aaKnown RBP6.06□□□□□ -1.44
SMC5-202ENST00000471372 CLDN17P56750 224 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 MSLNQ13421 630 aaPredicted RBP6.06□□□□□ -1.44
SMC5-202ENST00000471372 GIT2Q14161 759 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 SIRPB2Q5JXA9 342 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 SLC35D3Q5M8T2 416 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 LDLRAP1Q5SW96 308 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 CD164L2Q6UWJ8 174 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 CPEB2Q7Z5Q1 589 aaKnown RBP6.06□□□□□ -1.44
SMC5-202ENST00000471372 C5orf24Q7Z6I8 188 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 PRSS35Q8N3Z0 413 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 KCNH5Q8NCM2 988 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 LNX1Q8TBB1 728 aaPredicted RBP6.06□□□□□ -1.44
SMC5-202ENST00000471372 SLC47A1Q96FL8 570 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 ADGRG7Q96K78 797 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 THUMPD2Q9BTF0 503 aaKnown RBP6.06□□□□□ -1.44
SMC5-202ENST00000471372 OR2B2Q9GZK3 357 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 SHARPINQ9H0F6 387 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 CHST11Q9NPF2 352 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 PANK4Q9NVE7 773 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 CNOT2Q9NZN8 540 aaKnown RBP6.06□□□□□ -1.44
SMC5-202ENST00000471372 CLIP2Q9UDT6 1046 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 POU2F3Q9UKI9 436 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 DUSP12Q9UNI6 340 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 NCKAP1Q9Y2A7 1128 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 R4GN57 208 aa6.06□□□□□ -1.44
SMC5-202ENST00000471372 IL16Q14005 1332 aa6.05□□□□□ -1.44
SMC5-202ENST00000471372 A0A1W2PN81 502 aa6.05□□□□□ -1.44
SMC5-202ENST00000471372 CCDC162PA2VCL2 907 aa6.05□□□□□ -1.44
SMC5-202ENST00000471372 FPGTO14772 594 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms