RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 RPL10P27635 214 aaKnown RBP16.81■□□□□ 0.28
HSPG2-208ENST00000471322 GRK6P43250 576 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 CLDN8P56748 225 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 SLC34A1Q06495 639 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 TRAP1Q12931 704 aaKnown RBP16.81■□□□□ 0.28
HSPG2-208ENST00000471322 DEFB133Q30KQ1 61 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 DBX2Q6ZNG2 339 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 KANSL1Q7Z3B3 1105 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 ARPINQ7Z6K5 226 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 VPS33AQ96AX1 596 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 FCRL1Q96LA6 429 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 INSM2Q96T92 566 aaPredicted RBP16.81■□□□□ 0.28
HSPG2-208ENST00000471322 LRRC61Q9BV99 259 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 CARS2Q9HA77 564 aaKnown RBP16.81■□□□□ 0.28
HSPG2-208ENST00000471322 CD300AQ9UGN4 299 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 KCNK6Q9Y257 313 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 RUVBL1Q9Y265 456 aaKnown RBP16.81■□□□□ 0.28
HSPG2-208ENST00000471322 L3MBTL1Q9Y468 752 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 PCDHGB2Q9Y5G2 931 aa16.81■□□□□ 0.28
HSPG2-208ENST00000471322 GOLGA4Q13439 2230 aaKnown RBP16.8■□□□□ 0.28
HSPG2-208ENST00000471322 C9JVG2 144 aa16.8■□□□□ 0.28
HSPG2-208ENST00000471322 YKT6O15498 198 aa16.8■□□□□ 0.28
HSPG2-208ENST00000471322 CBFA2T3O75081 653 aa16.8■□□□□ 0.28
HSPG2-208ENST00000471322 BCAS2O75934 225 aaPredicted RBP16.8■□□□□ 0.28
HSPG2-208ENST00000471322 RASGRP1O95267 797 aa16.8■□□□□ 0.28
HSPG2-208ENST00000471322 STAMBPO95630 424 aa16.8■□□□□ 0.28
HSPG2-208ENST00000471322 GCKP35557 465 aa16.8■□□□□ 0.28
HSPG2-208ENST00000471322 PHEXP78562 749 aa16.8■□□□□ 0.28
HSPG2-208ENST00000471322 CCNIQ14094 377 aa16.8■□□□□ 0.28
HSPG2-208ENST00000471322 FLOT2Q14254 428 aa16.8■□□□□ 0.28
HSPG2-208ENST00000471322 TRIM25Q14258 630 aaKnown RBP16.8■□□□□ 0.28
HSPG2-208ENST00000471322 KRT33BQ14525 404 aa16.8■□□□□ 0.28
HSPG2-208ENST00000471322 TIGD2Q4W5G0 525 aa16.8■□□□□ 0.28
HSPG2-208ENST00000471322 CCDC157Q569K6 752 aa16.8■□□□□ 0.28
HSPG2-208ENST00000471322 LAS2Q8IYD9 372 aa16.8■□□□□ 0.28
HSPG2-208ENST00000471322 KRT78Q8N1N4 520 aa16.8■□□□□ 0.28
HSPG2-208ENST00000471322 DNAJB8Q8NHS0 232 aa16.8■□□□□ 0.28
HSPG2-208ENST00000471322 ASB9Q96DX5 294 aa16.8■□□□□ 0.28
HSPG2-208ENST00000471322 CLMPQ9H6B4 373 aa16.8■□□□□ 0.28
HSPG2-208ENST00000471322 S100A14Q9HCY8 104 aa16.8■□□□□ 0.28
HSPG2-208ENST00000471322 ABCD2Q9UBJ2 740 aa16.8■□□□□ 0.28
HSPG2-208ENST00000471322 ADGRE2Q9UHX3 823 aa16.8■□□□□ 0.28
HSPG2-208ENST00000471322 MAPRE3Q9UPY8 281 aa16.8■□□□□ 0.28
HSPG2-208ENST00000471322 ZFC3H1O60293 1989 aaKnown RBP16.8■□□□□ 0.28
HSPG2-208ENST00000471322 AQP9O43315 295 aa16.79■□□□□ 0.28
HSPG2-208ENST00000471322 PRMT3O60678 531 aa16.79■□□□□ 0.28
HSPG2-208ENST00000471322 SORBS2O94875 1100 aaKnown RBP16.79■□□□□ 0.28
HSPG2-208ENST00000471322 PCNAP12004 261 aa16.79■□□□□ 0.28
HSPG2-208ENST00000471322 CTSEP14091 401 aa16.79■□□□□ 0.28
HSPG2-208ENST00000471322 XRCC1P18887 633 aaPredicted RBP16.79■□□□□ 0.28
HSPG2-208ENST00000471322 CXCR2P25025 360 aa16.79■□□□□ 0.28
HSPG2-208ENST00000471322 SLC7A2P52569 658 aa16.79■□□□□ 0.28
HSPG2-208ENST00000471322 SIM1P81133 766 aaPredicted RBP16.79■□□□□ 0.28
HSPG2-208ENST00000471322 SLBPQ14493 270 aaKnown RBP eCLIP16.79■□□□□ 0.28
HSPG2-208ENST00000471322 PTGR1Q14914 329 aa16.79■□□□□ 0.28
HSPG2-208ENST00000471322 TRIP6Q15654 476 aaKnown RBP16.79■□□□□ 0.28
HSPG2-208ENST00000471322 NOXRED1Q6NXP6 359 aa16.79■□□□□ 0.28
HSPG2-208ENST00000471322 SUSD1Q6UWL2 747 aa16.79■□□□□ 0.28
HSPG2-208ENST00000471322 WASH2PQ6VEQ5 465 aa16.79■□□□□ 0.28
HSPG2-208ENST00000471322 C17orf64Q86WR6 236 aa16.79■□□□□ 0.28
HSPG2-208ENST00000471322 CCL4L1Q8NHW4 92 aa16.79■□□□□ 0.28
HSPG2-208ENST00000471322 HUS1BQ8NHY5 278 aa16.79■□□□□ 0.28
HSPG2-208ENST00000471322 SLC26A7Q8TE54 656 aa16.79■□□□□ 0.28
HSPG2-208ENST00000471322 SH3KBP1Q96B97 665 aa16.79■□□□□ 0.28
HSPG2-208ENST00000471322 APIPQ96GX9 242 aa16.79■□□□□ 0.28
HSPG2-208ENST00000471322 MTERF1Q99551 399 aaKnown RBP16.79■□□□□ 0.28
HSPG2-208ENST00000471322 PITHD1Q9GZP4 211 aaPredicted RBP16.79■□□□□ 0.28
HSPG2-208ENST00000471322 PELI2Q9HAT8 420 aa16.79■□□□□ 0.28
HSPG2-208ENST00000471322 WASH6PQ9NQA3 447 aa16.79■□□□□ 0.28
HSPG2-208ENST00000471322 GEMIN8Q9NWZ8 242 aaKnown RBP16.79■□□□□ 0.28
HSPG2-208ENST00000471322 WDR37Q9Y2I8 494 aa16.79■□□□□ 0.28
HSPG2-208ENST00000471322 CFAP20Q9Y6A4 193 aaKnown RBP16.79■□□□□ 0.28
HSPG2-208ENST00000471322 COLEC10Q9Y6Z7 277 aa16.79■□□□□ 0.28
HSPG2-208ENST00000471322 FREM2Q5SZK8 3169 aa16.79■□□□□ 0.28
HSPG2-208ENST00000471322 ASPDHA6ND91 283 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 PDZK1P1A8MUH7 402 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 FXYD1O00168 92 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 SIGLEC6O43699 453 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 TNFP01375 233 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 CSRP1P21291 193 aaKnown RBP16.78■□□□□ 0.28
HSPG2-208ENST00000471322 NDUFS1P28331 727 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 PIK3CBP42338 1070 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 ACSM2AQ08AH3 577 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 SPIN4Q56A73 249 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 CATSPEREQ5SY80 951 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 ACSM2BQ68CK6 577 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 ZFP1Q6P2D0 407 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 STARD8Q92502 1023 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 APOLD1Q96LR9 279 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 IL17FQ96PD4 163 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 TMEM168Q9H0V1 697 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 IL1RL2Q9HB29 575 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 PRM3Q9NNZ6 103 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 IMP3Q9NV31 184 aaKnown RBP16.78■□□□□ 0.28
HSPG2-208ENST00000471322 PLAGL1Q9UM63 463 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 PPT2Q9UMR5 302 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 FRYQ5TBA9 3013 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 PIPSLA2A3N6 862 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 ACOT8O14734 319 aa16.78■□□□□ 0.28
HSPG2-208ENST00000471322 GIMD1P0DJR0 217 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms