RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 DEPDC1Q5TB30 811 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 IKBIPQ70UQ0 350 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 COMMD6Q7Z4G1 85 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 CAMKMTQ7Z624 323 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 DHDDSQ86SQ9 333 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 ENDOVQ8N8Q3 282 aaKnown RBP8.99□□□□□ -0.97
VPS52-216ENST00000471309 ZNF548Q8NEK5 533 aaPredicted RBP8.99□□□□□ -0.97
VPS52-216ENST00000471309 FAM46DQ8NEK8 389 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 ZDHHC1Q8WTX9 485 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 JPH3Q8WXH2 748 aaPredicted RBP8.99□□□□□ -0.97
VPS52-216ENST00000471309 STMN2Q93045 179 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 CCDC124Q96CT7 223 aaKnown RBP8.99□□□□□ -0.97
VPS52-216ENST00000471309 ASB9Q96DX5 294 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 SLC39A3Q9BRY0 314 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 CENPKQ9BS16 269 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 DPH7Q9BTV6 452 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 OR51B5Q9H339 312 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 RMND5AQ9H871 391 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 CAAP1Q9H8G2 361 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 UCK1Q9HA47 277 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 PRM3Q9NNZ6 103 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 MYNNQ9NPC7 610 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 AHSPQ9NZD4 102 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 ADA2Q9NZK5 511 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 SNX7Q9UNH6 387 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 PCDHGA2Q9Y5H1 932 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 TTC28Q96AY4 2481 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 PRUNE2Q8WUY3 3088 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 TRBV23OR9-2A0A075B6M9 112 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 GNG14A0A1W2PPG7 69 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 OR2A25A4D2G3 310 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 C2orf74A8MZ97 194 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 B4DGG1 531 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 PLPP1O14494 284 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 HAT1O14929 419 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 SCAMP2O15127 329 aaKnown RBP8.98□□□□□ -0.97
VPS52-216ENST00000471309 BCAT2O15382 392 aaPredicted RBP8.98□□□□□ -0.97
VPS52-216ENST00000471309 NDUFS4O43181 175 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 MAP3K7O43318 606 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 LAMTOR5O43504 91 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 TNFSF14O43557 240 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 SORBS2O94875 1100 aaKnown RBP8.98□□□□□ -0.97
VPS52-216ENST00000471309 KCNH1O95259 989 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 UGT2B7P16662 529 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 S100A3P33764 101 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 RPL3P39023 403 aaKnown RBP8.98□□□□□ -0.97
VPS52-216ENST00000471309 BCL6P41182 706 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 GRIA3P42263 894 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 KIR3DL1P43629 444 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 GSTM5P46439 218 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 FASLGP48023 281 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 FNTBP49356 437 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 ARFIP1P53367 373 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 C21orf59P57076 290 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 HNRNPKP61978 463 aaKnown RBP eCLIP8.98□□□□□ -0.976e-8■■■□□ 14.9
VPS52-216ENST00000471309 CYP4F2P78329 520 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 HHEXQ03014 270 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 SRSF11Q05519 484 aaKnown RBP8.98□□□□□ -0.97
VPS52-216ENST00000471309 C1orf61Q13536 156 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 PWP1Q13610 501 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 SIM2Q14190 667 aaPredicted RBP8.98□□□□□ -0.97
VPS52-216ENST00000471309 CAPRIN1Q14444 709 aaKnown RBP8.98□□□□□ -0.97
VPS52-216ENST00000471309 TEAD4Q15561 434 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 ZIC1Q15915 447 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 MAPKAPK3Q16644 382 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 UGT8Q16880 541 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 ADPRMQ3LIE5 342 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.98□□□□□ -0.97
VPS52-216ENST00000471309 LRIF1Q5T3J3 769 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 KIAA1614Q5VZ46 1190 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 LYSMD4Q5XG99 296 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 PMS2CLQ68D20 193 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 TSSK4Q6SA08 328 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 DLEU7Q6UYE1 221 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 TMEM26Q6ZUK4 368 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 PAGE2Q7Z2X7 111 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 GPR180Q86V85 440 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 PAQR7Q86WK9 346 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 NUDT13Q86X67 352 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 SLC15A3Q8IY34 581 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 KIAA2013Q8IYS2 634 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 EFCAB3Q8N7B9 438 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 MFSD9Q8NBP5 474 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 TRPV3Q8NET8 790 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 OR8J3Q8NGG0 315 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 OR8J2Q8NGG1 315 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 OR10G6Q8NH81 332 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.98□□□□□ -0.97
VPS52-216ENST00000471309 LMX1AQ8TE12 382 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 CREB3L4Q8TEY5 395 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 GTF2H4Q92759 462 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 TMEM125Q96AQ2 219 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 MTERF3Q96E29 417 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 EGLN2Q96KS0 407 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 QRFPRQ96P65 431 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 OR2A14Q96R47 310 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 OR52E6Q96RD3 313 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 ZNF717Q9BY31 904 aaPredicted RBP8.98□□□□□ -0.97
VPS52-216ENST00000471309 KCNH6Q9H252 994 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 DCLRE1BQ9H816 532 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms