RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 TEX264Q9Y6I9 313 aa12.83□□□□□ -0.36
HMGN1-211ENST00000471260 SHANK1Q9Y566 2161 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 PABPN1LA6NDY0 278 aaKnown RBP12.82□□□□□ -0.36
HMGN1-211ENST00000471260 H0YIG0 161 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 HAT1O14929 419 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 GSTA1P08263 222 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 CYC1P08574 325 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 ABHD2P08910 425 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 FDXRP22570 491 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 GNLYP22749 145 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 CXCR2P25025 360 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 GRK3P35626 688 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 ELK3P41970 407 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 AVPR1BP47901 424 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 EMP2P54851 167 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 CDKN2DP55273 166 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 ARL4CP56559 192 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 AP2B1P63010 937 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 SRSF1Q07955 248 aaKnown RBP eCLIP12.82□□□□□ -0.36
HMGN1-211ENST00000471260 CBLBQ13191 982 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 PDAP1Q13442 181 aaKnown RBP12.82□□□□□ -0.36
HMGN1-211ENST00000471260 HIF1AQ16665 826 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 FHL5Q5TD97 284 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 STEAP4Q687X5 459 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 AGTRAPQ6RW13 159 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 LCTLQ6UWM7 567 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 CCDC121Q6ZUS5 278 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 NDUFAF7Q7L592 441 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 C17orf64Q86WR6 236 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 IGDCC3Q8IVU1 814 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 TMEM151BQ8IW70 566 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 DTWD1Q8N5C7 304 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 ANKS4BQ8N8V4 417 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 PDLIM5Q96HC4 596 aaKnown RBP12.82□□□□□ -0.36
HMGN1-211ENST00000471260 LMF1Q96S06 567 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 WDR77Q9BQA1 342 aaPredicted RBP12.82□□□□□ -0.36
HMGN1-211ENST00000471260 HAUS8Q9BT25 410 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 TRIM54Q9BYV2 358 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 EPS8L2Q9H6S3 715 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 CUEDC1Q9NWM3 386 aaPredicted RBP12.82□□□□□ -0.36
HMGN1-211ENST00000471260 TRPC4Q9UBN4 977 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 ADAMTS6Q9UKP5 1117 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 VWA7Q9Y334 891 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 ACTL7BQ9Y614 415 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 ESPL1Q14674 2120 aa12.82□□□□□ -0.36
HMGN1-211ENST00000471260 DOCK10Q96BY6 2186 aa12.81□□□□□ -0.36
HMGN1-211ENST00000471260 IDSB3KWA1 339 aa12.81□□□□□ -0.36
HMGN1-211ENST00000471260 FOXS1O43638 330 aa12.81□□□□□ -0.36
HMGN1-211ENST00000471260 BANF1O75531 89 aa12.81□□□□□ -0.36
HMGN1-211ENST00000471260 NSA2O95478 260 aaKnown RBP12.81□□□□□ -0.36
HMGN1-211ENST00000471260 ENO2P09104 434 aaPredicted RBP12.81□□□□□ -0.36
HMGN1-211ENST00000471260 ICAM2P13598 275 aa12.81□□□□□ -0.36
HMGN1-211ENST00000471260 CRB2Q5IJ48 1285 aa12.81□□□□□ -0.36
HMGN1-211ENST00000471260 RBM20Q5T481 1227 aaKnown RBP12.81□□□□□ -0.36
HMGN1-211ENST00000471260 HECTD2Q5U5R9 776 aa12.81□□□□□ -0.36
HMGN1-211ENST00000471260 CAPN13Q6MZZ7 669 aaPredicted RBP12.81□□□□□ -0.36
HMGN1-211ENST00000471260 LAPTM4BQ86VI4 370 aa12.81□□□□□ -0.36
HMGN1-211ENST00000471260 PARP9Q8IXQ6 854 aa12.81□□□□□ -0.36
HMGN1-211ENST00000471260 KBTBD2Q8IY47 623 aa12.81□□□□□ -0.36
HMGN1-211ENST00000471260 AMER3Q8N944 861 aa12.81□□□□□ -0.36
HMGN1-211ENST00000471260 CAMKVQ8NCB2 501 aa12.81□□□□□ -0.36
HMGN1-211ENST00000471260 ATL1Q8WXF7 558 aa12.81□□□□□ -0.36
HMGN1-211ENST00000471260 SNRNP40Q96DI7 357 aaKnown RBP12.81□□□□□ -0.36
HMGN1-211ENST00000471260 LINGO1Q96FE5 620 aa12.81□□□□□ -0.36
HMGN1-211ENST00000471260 THOC3Q96J01 351 aaKnown RBP12.81□□□□□ -0.36
HMGN1-211ENST00000471260 SARGQ9BW04 601 aa12.81□□□□□ -0.36
HMGN1-211ENST00000471260 YIPF2Q9BWQ6 316 aa12.81□□□□□ -0.36
HMGN1-211ENST00000471260 SGPP1Q9BX95 441 aa12.81□□□□□ -0.36
HMGN1-211ENST00000471260 SYNPO2LQ9H987 977 aa12.81□□□□□ -0.36
HMGN1-211ENST00000471260 PLAC1Q9HBJ0 212 aa12.81□□□□□ -0.36
HMGN1-211ENST00000471260 ABCF3Q9NUQ8 709 aa12.81□□□□□ -0.36
HMGN1-211ENST00000471260 LGALS13Q9UHV8 139 aa12.81□□□□□ -0.36
HMGN1-211ENST00000471260 CHMP2BQ9UQN3 213 aa12.81□□□□□ -0.36
HMGN1-211ENST00000471260 PTPN13Q12923 2485 aa12.81□□□□□ -0.36
HMGN1-211ENST00000471260 LOC102723996A0A087X1L8 192 aa12.8□□□□□ -0.36
HMGN1-211ENST00000471260 A0A0A6YYC8 382 aaPredicted RBP12.8□□□□□ -0.36
HMGN1-211ENST00000471260 NSG1A0A0A6YYJ2 146 aa12.8□□□□□ -0.36
HMGN1-211ENST00000471260 TCP11X1B4DZS4 312 aa12.8□□□□□ -0.36
HMGN1-211ENST00000471260 E7ESA3 106 aa12.8□□□□□ -0.36
HMGN1-211ENST00000471260 I3L1I5 382 aaPredicted RBP12.8□□□□□ -0.36
HMGN1-211ENST00000471260 MASP2O00187 686 aa12.8□□□□□ -0.36
HMGN1-211ENST00000471260 TSPAN12O95859 305 aa12.8□□□□□ -0.36
HMGN1-211ENST00000471260 HEXBP07686 556 aa12.8□□□□□ -0.36
HMGN1-211ENST00000471260 NPPBP16860 134 aa12.8□□□□□ -0.36
HMGN1-211ENST00000471260 DRD4P21917 467 aa12.8□□□□□ -0.36
HMGN1-211ENST00000471260 UQCRFS1P47985 274 aa12.8□□□□□ -0.36
HMGN1-211ENST00000471260 ITGA8P53708 1063 aa12.8□□□□□ -0.36
HMGN1-211ENST00000471260 CSNK1G2P78368 415 aa12.8□□□□□ -0.36
HMGN1-211ENST00000471260 ACTN3Q08043 901 aaPredicted RBP12.8□□□□□ -0.36
HMGN1-211ENST00000471260 NAE1Q13564 534 aa12.8□□□□□ -0.36
HMGN1-211ENST00000471260 SLC29A2Q14542 456 aa12.8□□□□□ -0.36
HMGN1-211ENST00000471260 B3GNTL1Q67FW5 361 aaPredicted RBP12.8□□□□□ -0.36
HMGN1-211ENST00000471260 TTC19Q6DKK2 380 aaPredicted RBP12.8□□□□□ -0.36
HMGN1-211ENST00000471260 ISLR2Q6UXK2 745 aa12.8□□□□□ -0.36
HMGN1-211ENST00000471260 RIPOR1Q6ZS17 1223 aa12.8□□□□□ -0.36
HMGN1-211ENST00000471260 VN1R4Q7Z5H5 301 aa12.8□□□□□ -0.36
HMGN1-211ENST00000471260 SLC26A11Q86WA9 606 aa12.8□□□□□ -0.36
HMGN1-211ENST00000471260 GPATCH11Q8N954 259 aa12.8□□□□□ -0.36
HMGN1-211ENST00000471260 ABHD11Q8NFV4 315 aa12.8□□□□□ -0.36
HMGN1-211ENST00000471260 OR56A3Q8NH54 315 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms