RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 PLD3Q8IV08 490 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 SUMF1Q8NBK3 374 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 CAMKVQ8NCB2 501 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 PRSS33Q8NF86 280 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 OR2T11Q8NH01 316 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 BAHD1Q8TBE0 780 aaPredicted RBP9.35□□□□□ -0.91
CCM2-204ENST00000470837 IFI44Q8TCB0 444 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 RGMAQ96B86 450 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 MARK4Q96L34 752 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 MAP3K3Q99759 626 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 C1orf50Q9BV19 199 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 MYLK2Q9H1R3 596 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 OR51B5Q9H339 312 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 COPS7BQ9H9Q2 264 aaPredicted RBP9.35□□□□□ -0.91
CCM2-204ENST00000470837 PDE7BQ9NP56 450 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 SAR1AQ9NR31 198 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 SEMA4GQ9NTN9 838 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 TXLNGQ9NUQ3 528 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 ARMCX1Q9P291 453 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 PPT2Q9UMR5 302 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 MAPRE3Q9UPY8 281 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 RUVBL1Q9Y265 456 aaKnown RBP9.35□□□□□ -0.91
CCM2-204ENST00000470837 POLR3HQ9Y535 204 aaPredicted RBP9.35□□□□□ -0.91
CCM2-204ENST00000470837 KLK4Q9Y5K2 254 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 AP1M2Q9Y6Q5 423 aa9.35□□□□□ -0.91
CCM2-204ENST00000470837 ZFC3H1O60293 1989 aaKnown RBP9.34□□□□□ -0.91
CCM2-204ENST00000470837 SLC9B1P1A6NJY1 282 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 ZSCAN9O15535 394 aaPredicted RBP9.34□□□□□ -0.91
CCM2-204ENST00000470837 HNRNPCL1O60812 293 aaKnown RBP9.34□□□□□ -0.91
CCM2-204ENST00000470837 SLC22A3O75751 556 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 SEMA3DO95025 777 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 ZBTB11O95625 1053 aaPredicted RBP9.34□□□□□ -0.91
CCM2-204ENST00000470837 CPNE6O95741 557 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 EIF2S1P05198 315 aaKnown RBP9.34□□□□□ -0.91
CCM2-204ENST00000470837 RPLP0P05388 317 aaKnown RBP9.34□□□□□ -0.91
CCM2-204ENST00000470837 THRAP10827 490 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 ESRRAP11474 423 aaPredicted RBP9.34□□□□□ -0.91
CCM2-204ENST00000470837 MYF5P13349 255 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 PVRP15151 417 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 ACPPP15309 386 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 DDX5P17844 614 aaKnown RBP9.34□□□□□ -0.91
CCM2-204ENST00000470837 PRPH2P23942 346 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 ASMTP46597 345 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 RASSF2P50749 326 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 SKP1P63208 163 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 HSD11B2P80365 405 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 MXRA7P84157 204 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 TUBB3Q13509 450 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 PWP1Q13610 501 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 UBAP2LQ14157 1087 aaKnown RBP9.34□□□□□ -0.91
CCM2-204ENST00000470837 KRT72Q14CN4 511 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 CLPPQ16740 277 aaPredicted RBP9.34□□□□□ -0.91
CCM2-204ENST00000470837 RFTN2Q52LD8 501 aaPredicted RBP9.34□□□□□ -0.91
CCM2-204ENST00000470837 SNAP47Q5SQN1 464 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 MANEAQ5SRI9 462 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 DEPDC1Q5TB30 811 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 KHDRBS2Q5VWX1 349 aaKnown RBP9.34□□□□□ -0.91
CCM2-204ENST00000470837 TRIM40Q6P9F5 258 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 USP53Q70EK8 1073 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 ABHD13Q7L211 337 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 KMT5CQ86Y97 462 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 CPSF7Q8N684 471 aaKnown RBP9.34□□□□□ -0.91
CCM2-204ENST00000470837 FITM2Q8N6M3 262 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 ANKRD53Q8N9V6 530 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 WDR48Q8TAF3 677 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 FLVCR1-AS1Q8TAF5 88 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 STARD8Q92502 1023 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 PRR11Q96HE9 360 aaPredicted RBP9.34□□□□□ -0.91
CCM2-204ENST00000470837 TRAPPC9Q96Q05 1148 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 CDC6Q99741 560 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 SARGQ9BW04 601 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 MRPL1Q9BYD6 325 aaKnown RBP9.34□□□□□ -0.91
CCM2-204ENST00000470837 DPY30Q9C005 99 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 ROGDIQ9GZN7 287 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 REXO4Q9GZR2 422 aaKnown RBP9.34□□□□□ -0.91
CCM2-204ENST00000470837 SPNS1Q9H2V7 528 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 FANCEQ9HB96 536 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 AIG1Q9NVV5 245 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 GIMAP2Q9UG22 337 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 PCDHGA4Q9Y5G9 962 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 COPG1Q9Y678 874 aaKnown RBP9.34□□□□□ -0.91
CCM2-204ENST00000470837 LRP4O75096 1905 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 CEP192Q8TEP8 1941 aa9.34□□□□□ -0.91
CCM2-204ENST00000470837 NPIPB8E9PQR5 432 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 SAP18O00422 153 aaKnown RBP9.33□□□□□ -0.92
CCM2-204ENST00000470837 TOX3O15405 576 aaPredicted RBP9.33□□□□□ -0.92
CCM2-204ENST00000470837 B4GAT1O43505 415 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 PCDH7O60245 1069 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 LCMT2O60294 686 aaKnown RBP9.33□□□□□ -0.92
CCM2-204ENST00000470837 SRPX2O60687 465 aaPredicted RBP9.33□□□□□ -0.92
CCM2-204ENST00000470837 GUCY1B2O75343 617 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 GP1BAP07359 652 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 ANXA4P09525 319 aaPredicted RBP9.33□□□□□ -0.92
CCM2-204ENST00000470837 PRR35P0CG20 571 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 ST6GAL1P15907 406 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 PIK3R1P27986 724 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 CD1CP29017 333 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 PRDX6P30041 224 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 NBL1P41271 181 aa9.33□□□□□ -0.92
CCM2-204ENST00000470837 SSR2P43308 183 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms