RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 C1orf189Q5VU69 101 aa13.83□□□□□ -0.2
COL27A1-203ENST00000468565 SUSD1Q6UWL2 747 aa13.83□□□□□ -0.2
COL27A1-203ENST00000468565 LRRC56Q8IYG6 542 aaPredicted RBP13.83□□□□□ -0.2
COL27A1-203ENST00000468565 TTC29Q8NA56 475 aaPredicted RBP13.83□□□□□ -0.2
COL27A1-203ENST00000468565 ABHD17AQ96GS6 310 aa13.83□□□□□ -0.2
COL27A1-203ENST00000468565 TMEM237Q96Q45 408 aa13.83□□□□□ -0.2
COL27A1-203ENST00000468565 TMEM120AQ9BXJ8 343 aa13.83□□□□□ -0.2
COL27A1-203ENST00000468565 SLC6A20Q9NP91 592 aa13.83□□□□□ -0.2
COL27A1-203ENST00000468565 MRPS30Q9NP92 439 aaKnown RBP13.83□□□□□ -0.2
COL27A1-203ENST00000468565 SLC17A6Q9P2U8 582 aa13.83□□□□□ -0.2
COL27A1-203ENST00000468565 DCDC2Q9UHG0 476 aa13.83□□□□□ -0.2
COL27A1-203ENST00000468565 GPN3Q9UHW5 284 aaPredicted RBP13.83□□□□□ -0.2
COL27A1-203ENST00000468565 TRIM33Q9UPN9 1127 aa13.83□□□□□ -0.2
COL27A1-203ENST00000468565 A0A1B0GX78 115 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 SLC16A5O15375 505 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 ONECUT2O95948 504 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 CDKN2DP55273 166 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 ABATP80404 500 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 PRDX1Q06830 199 aaKnown RBP13.82□□□□□ -0.2
COL27A1-203ENST00000468565 NKAIN1Q4KMZ8 207 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 FAM45BPQ6NSW5 357 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 MRPL14Q6P1L8 145 aaKnown RBP13.82□□□□□ -0.2
COL27A1-203ENST00000468565 PAQR3Q6TCH7 311 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 MTDHQ86UE4 582 aaKnown RBP13.82□□□□□ -0.2
COL27A1-203ENST00000468565 SPNS2Q8IVW8 549 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 MYO1HQ8N1T3 1032 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 FAM45AQ8TCE6 357 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 EEF1AKMT1Q8WVE0 214 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 DPH7Q9BTV6 452 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 ACAT2Q9BWD1 397 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 CUTCQ9NTM9 273 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 IFT80Q9P2H3 777 aaPredicted RBP13.82□□□□□ -0.2
COL27A1-203ENST00000468565 HEY2Q9UBP5 337 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 NDOR1Q9UHB4 597 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 TAC3Q9UHF0 121 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 HAO1Q9UJM8 370 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 STK38LQ9Y2H1 464 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 HELZ2Q9BYK8 2649 aaKnown RBP13.82□□□□□ -0.2
COL27A1-203ENST00000468565 TNRC6AQ8NDV7 1962 aaKnown RBP13.82□□□□□ -0.2
COL27A1-203ENST00000468565 MKRN2OSH3BPM6 223 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 DSCR3O14972 297 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 KLF7O75840 302 aaPredicted RBP13.82□□□□□ -0.2
COL27A1-203ENST00000468565 FDXRP22570 491 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 IMPA1P29218 277 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 NFKB2Q00653 900 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 RELAQ04206 551 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 BST1Q10588 318 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 FAM214AQ32MH5 1076 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 HECTD2Q5U5R9 776 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 CLNKQ7Z7G1 428 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 PAQR7Q86WK9 346 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 RAB43Q86YS6 212 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 PPP1R14CQ8TAE6 165 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 MCOLN3Q8TDD5 553 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 ZFYVE21Q9BQ24 234 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 MECRQ9BV79 373 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 CXorf56Q9H5V9 222 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 UTP6Q9NYH9 597 aaKnown RBP13.82□□□□□ -0.2
COL27A1-203ENST00000468565 VWA7Q9Y334 891 aa13.82□□□□□ -0.2
COL27A1-203ENST00000468565 A0A0J9YVX5 310 aa13.81□□□□□ -0.2
COL27A1-203ENST00000468565 PIM1P11309 404 aaPredicted RBP13.81□□□□□ -0.2
COL27A1-203ENST00000468565 VSX2P58304 361 aaPredicted RBP13.81□□□□□ -0.2
COL27A1-203ENST00000468565 YBX1P67809 324 aaKnown RBP13.81□□□□□ -0.2
COL27A1-203ENST00000468565 STX3Q13277 289 aa13.81□□□□□ -0.2
COL27A1-203ENST00000468565 WASHC2DQ5SRD0 308 aa13.81□□□□□ -0.2
COL27A1-203ENST00000468565 MLIPQ5VWP3 458 aa13.81□□□□□ -0.2
COL27A1-203ENST00000468565 FRMPD2BQ6IN97 320 aa13.81□□□□□ -0.2
COL27A1-203ENST00000468565 ZNF425Q6IV72 752 aa13.81□□□□□ -0.2
COL27A1-203ENST00000468565 TCTN3Q6NUS6 607 aa13.81□□□□□ -0.2
COL27A1-203ENST00000468565 TTLL10Q6ZVT0 673 aa13.81□□□□□ -0.2
COL27A1-203ENST00000468565 CRLF3Q8IUI8 442 aa13.81□□□□□ -0.2
COL27A1-203ENST00000468565 GPATCH11Q8N954 259 aa13.81□□□□□ -0.2
COL27A1-203ENST00000468565 PPFIBP2Q8ND30 876 aa13.81□□□□□ -0.2
COL27A1-203ENST00000468565 FKBP10Q96AY3 582 aa13.81□□□□□ -0.2
COL27A1-203ENST00000468565 LINGO1Q96FE5 620 aa13.81□□□□□ -0.2
COL27A1-203ENST00000468565 CCDC138Q96M89 665 aa13.81□□□□□ -0.2
COL27A1-203ENST00000468565 IP6K3Q96PC2 410 aa13.81□□□□□ -0.2
COL27A1-203ENST00000468565 KCNK13Q9HB14 408 aa13.81□□□□□ -0.2
COL27A1-203ENST00000468565 PARVBQ9HBI1 364 aa13.81□□□□□ -0.2
COL27A1-203ENST00000468565 NSMCE4AQ9NXX6 385 aa13.81□□□□□ -0.2
COL27A1-203ENST00000468565 TLK1Q9UKI8 766 aa13.81□□□□□ -0.2
COL27A1-203ENST00000468565 PCSK5Q92824 1860 aa13.81□□□□□ -0.2
COL27A1-203ENST00000468565 GCN1Q92616 2671 aaKnown RBP13.81□□□□□ -0.2
COL27A1-203ENST00000468565 IGKV1-8A0A0C4DH67 115 aa13.8□□□□□ -0.2
COL27A1-203ENST00000468565 SUV39H1O43463 412 aa13.8□□□□□ -0.2
COL27A1-203ENST00000468565 SLC28A2O43868 658 aa13.8□□□□□ -0.2
COL27A1-203ENST00000468565 NRP2O60462 931 aa13.8□□□□□ -0.2
COL27A1-203ENST00000468565 TSPAN12O95859 305 aa13.8□□□□□ -0.2
COL27A1-203ENST00000468565 ALDOAP04075 364 aaKnown RBP13.8□□□□□ -0.2
COL27A1-203ENST00000468565 T-ENOLP0DO92 83 aa13.8□□□□□ -0.2
COL27A1-203ENST00000468565 ITGAXP20702 1163 aa13.8□□□□□ -0.2
COL27A1-203ENST00000468565 ALAS2P22557 587 aa13.8□□□□□ -0.2
COL27A1-203ENST00000468565 SPRP35270 261 aaPredicted RBP13.8□□□□□ -0.2
COL27A1-203ENST00000468565 FOLR3P41439 243 aa13.8□□□□□ -0.2
COL27A1-203ENST00000468565 IL2P60568 153 aa13.8□□□□□ -0.2
COL27A1-203ENST00000468565 ILF2Q12905 390 aaKnown RBP13.8□□□□□ -0.2
COL27A1-203ENST00000468565 TSTA3Q13630 321 aaPredicted RBP13.8□□□□□ -0.2
COL27A1-203ENST00000468565 SSPNQ14714 243 aa13.8□□□□□ -0.2
COL27A1-203ENST00000468565 FAM69BQ5VUD6 431 aa13.8□□□□□ -0.2
COL27A1-203ENST00000468565 FBXO42Q6P3S6 717 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms