RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 SKIV2L2P42285 1042 aaKnown RBP12.31□□□□□ -0.44
PTPN7-207ENST00000468385 RPS15AP62244 130 aaKnown RBP12.31□□□□□ -0.44
PTPN7-207ENST00000468385 BASP1P80723 227 aaKnown RBP12.31□□□□□ -0.44
PTPN7-207ENST00000468385 RHAGQ02094 409 aa12.31□□□□□ -0.44
PTPN7-207ENST00000468385 SIX1Q15475 284 aaPredicted RBP12.31□□□□□ -0.44
PTPN7-207ENST00000468385 THEMIS2Q5TEJ8 643 aa12.31□□□□□ -0.44
PTPN7-207ENST00000468385 ZNF468Q5VIY5 522 aaPredicted RBP12.31□□□□□ -0.44
PTPN7-207ENST00000468385 KIAA0930Q6ICG6 404 aaPredicted RBP12.31□□□□□ -0.44
PTPN7-207ENST00000468385 SLC25A25Q6KCM7 469 aa12.31□□□□□ -0.44
PTPN7-207ENST00000468385 PAPD4Q6PIY7 484 aaKnown RBP12.31□□□□□ -0.44
PTPN7-207ENST00000468385 CYHR1Q6ZMK1 362 aa12.31□□□□□ -0.44
PTPN7-207ENST00000468385 FGD2Q7Z6J4 655 aa12.31□□□□□ -0.44
PTPN7-207ENST00000468385 PDSS2Q86YH6 399 aa12.31□□□□□ -0.44
PTPN7-207ENST00000468385 DOLPP1Q86YN1 238 aa12.31□□□□□ -0.44
PTPN7-207ENST00000468385 GHDCQ8N2G8 530 aa12.31□□□□□ -0.44
PTPN7-207ENST00000468385 PLPP5Q8NEB5 264 aa12.31□□□□□ -0.44
PTPN7-207ENST00000468385 MCOLN3Q8TDD5 553 aa12.31□□□□□ -0.44
PTPN7-207ENST00000468385 ASB11Q8WXH4 323 aa12.31□□□□□ -0.44
PTPN7-207ENST00000468385 TM4SF19Q96DZ7 209 aa12.31□□□□□ -0.44
PTPN7-207ENST00000468385 CCDC138Q96M89 665 aa12.31□□□□□ -0.44
PTPN7-207ENST00000468385 DMRTA2Q96SC8 542 aa12.31□□□□□ -0.44
PTPN7-207ENST00000468385 MCCC2Q9HCC0 563 aa12.31□□□□□ -0.44
PTPN7-207ENST00000468385 TMEM184CQ9NVA4 438 aa12.31□□□□□ -0.44
PTPN7-207ENST00000468385 ASB1Q9Y576 335 aa12.31□□□□□ -0.44
PTPN7-207ENST00000468385 CACNA1CQ13936 2221 aa12.31□□□□□ -0.44
PTPN7-207ENST00000468385 MED13LQ71F56 2210 aa12.31□□□□□ -0.44
PTPN7-207ENST00000468385 ZNF469Q96JG9 3925 aaPredicted RBP12.31□□□□□ -0.44
PTPN7-207ENST00000468385 TCRBV7S3A2A0A539 114 aa12.3□□□□□ -0.44
PTPN7-207ENST00000468385 E9PLN8 166 aa12.3□□□□□ -0.44
PTPN7-207ENST00000468385 GFYI3L273 518 aa12.3□□□□□ -0.44
PTPN7-207ENST00000468385 RDH16O75452 317 aa12.3□□□□□ -0.44
PTPN7-207ENST00000468385 F7P08709 466 aaPredicted RBP12.3□□□□□ -0.44
PTPN7-207ENST00000468385 MPC1LP0DKB6 136 aa12.3□□□□□ -0.44
PTPN7-207ENST00000468385 ABOP16442 354 aa12.3□□□□□ -0.44
PTPN7-207ENST00000468385 ZNF75DP51815 510 aa12.3□□□□□ -0.44
PTPN7-207ENST00000468385 CSNK1G2P78368 415 aa12.3□□□□□ -0.44
PTPN7-207ENST00000468385 OC90Q02509 493 aaPredicted RBP12.3□□□□□ -0.44
PTPN7-207ENST00000468385 CUL1Q13616 776 aa12.3□□□□□ -0.44
PTPN7-207ENST00000468385 USP10Q14694 798 aaKnown RBP12.3□□□□□ -0.44
PTPN7-207ENST00000468385 SFT2D3Q587I9 215 aa12.3□□□□□ -0.44
PTPN7-207ENST00000468385 RNFT1Q5M7Z0 435 aa12.3□□□□□ -0.44
PTPN7-207ENST00000468385 C3P1Q6ZMU1 363 aa12.3□□□□□ -0.44
PTPN7-207ENST00000468385 CILP2Q8IUL8 1156 aa12.3□□□□□ -0.44
PTPN7-207ENST00000468385 TMEM139Q8IV31 216 aa12.3□□□□□ -0.44
PTPN7-207ENST00000468385 SLC5A8Q8N695 610 aa12.3□□□□□ -0.44
PTPN7-207ENST00000468385 PRELID2Q8N945 189 aa12.3□□□□□ -0.44
PTPN7-207ENST00000468385 KCT2Q8NC54 265 aa12.3□□□□□ -0.44
PTPN7-207ENST00000468385 FAM98AQ8NCA5 519 aaKnown RBP12.3□□□□□ -0.44
PTPN7-207ENST00000468385 ZCCHC10Q8TBK6 192 aa12.3□□□□□ -0.44
PTPN7-207ENST00000468385 CHTF18Q8WVB6 975 aa12.3□□□□□ -0.44
PTPN7-207ENST00000468385 TSLPQ969D9 159 aa12.3□□□□□ -0.44
PTPN7-207ENST00000468385 LPAR4Q99677 370 aa12.3□□□□□ -0.44
PTPN7-207ENST00000468385 VKORC1Q9BQB6 163 aa12.3□□□□□ -0.44
PTPN7-207ENST00000468385 DESI2Q9BSY9 194 aa12.3□□□□□ -0.44
PTPN7-207ENST00000468385 RBCK1Q9BYM8 510 aa12.3□□□□□ -0.44
PTPN7-207ENST00000468385 CDCP1Q9H5V8 836 aa12.3□□□□□ -0.44
PTPN7-207ENST00000468385 ANKHQ9HCJ1 492 aa12.3□□□□□ -0.44
PTPN7-207ENST00000468385 LANCL2Q9NS86 450 aa12.3□□□□□ -0.44
PTPN7-207ENST00000468385 LRFN1Q9P244 771 aa12.3□□□□□ -0.44
PTPN7-207ENST00000468385 KLHL42Q9P2K6 505 aa12.3□□□□□ -0.44
PTPN7-207ENST00000468385 ZBTB14O43829 449 aa12.29□□□□□ -0.44
PTPN7-207ENST00000468385 CDC123O75794 336 aaPredicted RBP12.29□□□□□ -0.44
PTPN7-207ENST00000468385 TSPAN12O95859 305 aa12.29□□□□□ -0.44
PTPN7-207ENST00000468385 TPSB2P20231 275 aa12.29□□□□□ -0.44
PTPN7-207ENST00000468385 HRH2P25021 359 aa12.29□□□□□ -0.44
PTPN7-207ENST00000468385 COILP38432 576 aaPredicted RBP12.29□□□□□ -0.44
PTPN7-207ENST00000468385 SLC26A5P58743 744 aa12.29□□□□□ -0.44
PTPN7-207ENST00000468385 TBPL1P62380 186 aa12.29□□□□□ -0.44
PTPN7-207ENST00000468385 ABRAXAS2Q15018 415 aa12.29□□□□□ -0.44
PTPN7-207ENST00000468385 RPS6KA1Q15418 735 aa12.29□□□□□ -0.44
PTPN7-207ENST00000468385 TPSAB1Q15661 275 aa12.29□□□□□ -0.44
PTPN7-207ENST00000468385 NSDHLQ15738 373 aa12.29□□□□□ -0.44
PTPN7-207ENST00000468385 CCNG2Q16589 344 aa12.29□□□□□ -0.44
PTPN7-207ENST00000468385 KCTD19Q17RG1 926 aaPredicted RBP12.29□□□□□ -0.44
PTPN7-207ENST00000468385 KRTAP21-3Q3LHN1 58 aa12.29□□□□□ -0.44
PTPN7-207ENST00000468385 TTLL9Q3SXZ7 439 aa12.29□□□□□ -0.44
PTPN7-207ENST00000468385 NEPROQ6NW34 567 aa12.29□□□□□ -0.44
PTPN7-207ENST00000468385 ZNF549Q6P9A3 640 aa12.29□□□□□ -0.44
PTPN7-207ENST00000468385 DRICH1Q6PGQ1 229 aaPredicted RBP12.29□□□□□ -0.44
PTPN7-207ENST00000468385 C4orf22Q6V702 233 aa12.29□□□□□ -0.44
PTPN7-207ENST00000468385 MEX3BQ6ZN04 569 aaKnown RBP12.29□□□□□ -0.44
PTPN7-207ENST00000468385 ZNF227Q86WZ6 799 aa12.29□□□□□ -0.44
PTPN7-207ENST00000468385 LGI4Q8N135 537 aa12.29□□□□□ -0.44
PTPN7-207ENST00000468385 CPSF7Q8N684 471 aaKnown RBP12.29□□□□□ -0.44
PTPN7-207ENST00000468385 HORMAD2Q8N7B1 307 aa12.29□□□□□ -0.44
PTPN7-207ENST00000468385 CAMKVQ8NCB2 501 aa12.29□□□□□ -0.44
PTPN7-207ENST00000468385 ELP5Q8TE02 316 aa12.29□□□□□ -0.44
PTPN7-207ENST00000468385 SDCCAG3Q96C92 435 aa12.29□□□□□ -0.44
PTPN7-207ENST00000468385 THAP11Q96EK4 314 aa12.29□□□□□ -0.44
PTPN7-207ENST00000468385 PEX11GQ96HA9 241 aa12.29□□□□□ -0.44
PTPN7-207ENST00000468385 BAG1Q99933 345 aaPredicted RBP12.29□□□□□ -0.44
PTPN7-207ENST00000468385 CCDC177Q9NQR7 707 aaPredicted RBP12.29□□□□□ -0.44
PTPN7-207ENST00000468385 INTS10Q9NVR2 710 aaKnown RBP12.29□□□□□ -0.44
PTPN7-207ENST00000468385 SH2B3Q9UQQ2 575 aa12.29□□□□□ -0.44
PTPN7-207ENST00000468385 FEZF1A0PJY2 475 aa12.28□□□□□ -0.44
PTPN7-207ENST00000468385 MAGEB17A8MXT2 336 aa12.28□□□□□ -0.44
PTPN7-207ENST00000468385 CDK2AP1O14519 115 aa12.28□□□□□ -0.44
PTPN7-207ENST00000468385 PRRG2O14669 202 aa12.28□□□□□ -0.44
PTPN7-207ENST00000468385 NDC80O14777 642 aa12.28□□□□□ -0.44
PTPN7-207ENST00000468385 LCMT2O60294 686 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms