RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 NIPAL2Q9H841 368 aa15.02□□□□□ -0.01
CHD1L-205ENST00000467213 CFAP20Q9Y6A4 193 aaKnown RBP15.02□□□□□ -0.01
CHD1L-205ENST00000467213 C1orf226A1L170 272 aa15.02□□□□□ -0.01
CHD1L-205ENST00000467213 GAPDHSO14556 408 aaPredicted RBP15.02□□□□□ -0.01
CHD1L-205ENST00000467213 CTDSP2O14595 271 aa15.02□□□□□ -0.01
CHD1L-205ENST00000467213 SCAMP3O14828 347 aaKnown RBP15.02□□□□□ -0.01
CHD1L-205ENST00000467213 SLC25A14O95258 325 aaPredicted RBP15.02□□□□□ -0.01
CHD1L-205ENST00000467213 POMCP01189 267 aa15.02□□□□□ -0.01
CHD1L-205ENST00000467213 TACR1P25103 407 aa15.02□□□□□ -0.01
CHD1L-205ENST00000467213 PKLRP30613 574 aa15.02□□□□□ -0.01
CHD1L-205ENST00000467213 GDF5P43026 501 aa15.02□□□□□ -0.01
CHD1L-205ENST00000467213 SLC6A12P48065 614 aa15.02□□□□□ -0.01
CHD1L-205ENST00000467213 CDC42P60953 191 aa15.02□□□□□ -0.01
CHD1L-205ENST00000467213 GLYR1Q49A26 553 aaPredicted RBP15.02□□□□□ -0.01
CHD1L-205ENST00000467213 PAN2Q504Q3 1202 aaKnown RBP15.02□□□□□ -0.01
CHD1L-205ENST00000467213 TMEM201Q5SNT2 666 aa15.02□□□□□ -0.01
CHD1L-205ENST00000467213 ZNF438Q7Z4V0 828 aa15.02□□□□□ -0.01
CHD1L-205ENST00000467213 CBARPQ8N350 705 aaPredicted RBP15.02□□□□□ -0.01
CHD1L-205ENST00000467213 MYO19Q96H55 970 aa15.02□□□□□ -0.01
CHD1L-205ENST00000467213 TSSK3Q96PN8 268 aa15.02□□□□□ -0.01
CHD1L-205ENST00000467213 AP5M1Q9H0R1 490 aa15.02□□□□□ -0.01
CHD1L-205ENST00000467213 RAD18Q9NS91 495 aa15.02□□□□□ -0.01
CHD1L-205ENST00000467213 KCTD5Q9NXV2 234 aa15.02□□□□□ -0.01
CHD1L-205ENST00000467213 LSM2Q9Y333 95 aaKnown RBP15.02□□□□□ -0.01
CHD1L-205ENST00000467213 AGAP14A8MT82 685 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 ZNF670-ZNF695F2Z2N8 137 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 SSX4O60224 188 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 HSD3B1P14060 373 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 ACRV1P26436 265 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 HSD3B2P26439 372 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 TNK1Q13470 666 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 ZNF79Q15937 498 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 SSX1Q16384 188 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 TRIM71Q2Q1W2 868 aaKnown RBP15.01□□□□□ -0.01
CHD1L-205ENST00000467213 SLC5A8Q8N695 610 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 ZFAND1Q8TCF1 268 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 JPH3Q8WXH2 748 aaPredicted RBP15.01□□□□□ -0.01
CHD1L-205ENST00000467213 ZC3HAV1LQ96H79 300 aaKnown RBP15.01□□□□□ -0.01
CHD1L-205ENST00000467213 MSLNLQ96KJ4 702 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 CCM2Q9BSQ5 444 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 ARHGAP39Q9C0H5 1083 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 MIR1-1HGQ9H1L0 117 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 RUBCNLQ9H714 662 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 TPT1P8Q9HAU6 139 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 SLC25A19Q9HC21 320 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 ERVK13-1Q9NX77 482 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 SH3BP4Q9P0V3 963 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 SCN10AQ9Y5Y9 1956 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 SLC16A5O15375 505 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 ITGALP20701 1170 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 P2RX3P56373 397 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 SNRPGP62308 76 aaKnown RBP15.01□□□□□ -0.01
CHD1L-205ENST00000467213 HYAL2Q12891 473 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 FAM110CQ1W6H9 321 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 SGO1Q5FBB7 561 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 ANXA8L1Q5VT79 327 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 MIB1Q86YT6 1006 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 OR8H2Q8N162 312 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 CLDN22Q8N7P3 220 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 C11orf65Q8NCR3 313 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 CXorf40BQ96DE9 158 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 C11orf24Q96F05 449 aaPredicted RBP15.01□□□□□ -0.01
CHD1L-205ENST00000467213 RNF167Q9H6Y7 350 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 BPIFA1Q9NP55 256 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 IMPAD1Q9NX62 359 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 RUVBL1Q9Y265 456 aaKnown RBP15.01□□□□□ -0.01
CHD1L-205ENST00000467213 PCDHGC4Q9Y5F7 938 aa15.01□□□□□ -0.01
CHD1L-205ENST00000467213 ZAR1LA6NP61 321 aa15□□□□□ -0.01
CHD1L-205ENST00000467213 NT5C1B-RDH14C9J2C7 533 aa15□□□□□ -0.01
CHD1L-205ENST00000467213 SYN3O14994 580 aa15□□□□□ -0.01
CHD1L-205ENST00000467213 GPX5O75715 221 aa15□□□□□ -0.01
CHD1L-205ENST00000467213 TBX18O95935 607 aa15□□□□□ -0.01
CHD1L-205ENST00000467213 DNTTP04053 509 aa15□□□□□ -0.01
CHD1L-205ENST00000467213 ITGB1P05556 798 aa15□□□□□ -0.01
CHD1L-205ENST00000467213 C8GP07360 202 aa15□□□□□ -0.01
CHD1L-205ENST00000467213 NFATC2Q13469 925 aa15□□□□□ -0.01
CHD1L-205ENST00000467213 CCDC58Q4VC31 144 aa15□□□□□ -0.01
CHD1L-205ENST00000467213 IFI44LQ53G44 452 aa15□□□□□ -0.01
CHD1L-205ENST00000467213 PPP1R13LQ8WUF5 828 aa15□□□□□ -0.01
CHD1L-205ENST00000467213 OPALINQ96PE5 141 aa15□□□□□ -0.01
CHD1L-205ENST00000467213 ASPNQ9BXN1 380 aa15□□□□□ -0.01
CHD1L-205ENST00000467213 CLN6Q9NWW5 311 aa15□□□□□ -0.01
CHD1L-205ENST00000467213 MS4A12Q9NXJ0 267 aa15□□□□□ -0.01
CHD1L-205ENST00000467213 HLA-DQB1P01920 261 aa15□□□□□ -0.01
CHD1L-205ENST00000467213 MAGP20916 626 aa15□□□□□ -0.01
CHD1L-205ENST00000467213 PTBP1P26599 531 aaKnown RBP eCLIP15□□□□□ -0.013e-8■■■□□ 15.9
CHD1L-205ENST00000467213 SLC6A4P31645 630 aa15□□□□□ -0.01
CHD1L-205ENST00000467213 CSTF2P33240 577 aaKnown RBP eCLIP15□□□□□ -0.01
CHD1L-205ENST00000467213 ASMTP46597 345 aa15□□□□□ -0.01
CHD1L-205ENST00000467213 SLC11A2P49281 568 aa15□□□□□ -0.01
CHD1L-205ENST00000467213 CACNB2Q08289 660 aaPredicted RBP15□□□□□ -0.01
CHD1L-205ENST00000467213 SMARCB1Q12824 385 aa15□□□□□ -0.01
CHD1L-205ENST00000467213 SP140Q13342 867 aa15□□□□□ -0.01
CHD1L-205ENST00000467213 NCF4Q15080 339 aa15□□□□□ -0.01
CHD1L-205ENST00000467213 TSTQ16762 297 aaKnown RBP15□□□□□ -0.01
CHD1L-205ENST00000467213 SOWAHCQ53LP3 525 aaPredicted RBP15□□□□□ -0.01
CHD1L-205ENST00000467213 SLC35F1Q5T1Q4 408 aa15□□□□□ -0.01
CHD1L-205ENST00000467213 CCDC149Q6ZUS6 474 aa15□□□□□ -0.01
CHD1L-205ENST00000467213 GATAD2AQ86YP4 633 aa15□□□□□ -0.01
CHD1L-205ENST00000467213 KLHDC9Q8NEP7 349 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms