RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 BLOC1S5Q8TDH9 187 aa11.67□□□□□ -0.54
UBR4-210ENST00000466969 ART5Q96L15 291 aa11.67□□□□□ -0.54
UBR4-210ENST00000466969 QRFPRQ96P65 431 aa11.67□□□□□ -0.54
UBR4-210ENST00000466969 TNFRSF13CQ96RJ3 184 aa11.67□□□□□ -0.54
UBR4-210ENST00000466969 FAM173AQ9BQD7 235 aa11.67□□□□□ -0.54
UBR4-210ENST00000466969 WDR83Q9BRX9 315 aaKnown RBP11.67□□□□□ -0.54
UBR4-210ENST00000466969 MED18Q9BUE0 208 aa11.67□□□□□ -0.54
UBR4-210ENST00000466969 KRTAP17-1Q9BYP8 105 aa11.67□□□□□ -0.54
UBR4-210ENST00000466969 HPF1Q9NWY4 346 aa11.67□□□□□ -0.54
UBR4-210ENST00000466969 KLHL28Q9NXS3 571 aa11.67□□□□□ -0.54
UBR4-210ENST00000466969 KDM4EB2RXH2 506 aaPredicted RBP11.66□□□□□ -0.54
UBR4-210ENST00000466969 G3V3Y1 287 aa11.66□□□□□ -0.54
UBR4-210ENST00000466969 KCNK1O00180 336 aa11.66□□□□□ -0.54
UBR4-210ENST00000466969 SRP72O76094 671 aaKnown RBP11.66□□□□□ -0.54
UBR4-210ENST00000466969 F13A1P00488 732 aa11.66□□□□□ -0.54
UBR4-210ENST00000466969 UCHL3P15374 230 aa11.66□□□□□ -0.54
UBR4-210ENST00000466969 ZNF16P17020 682 aaPredicted RBP11.66□□□□□ -0.54
UBR4-210ENST00000466969 IGFBP5P24593 272 aa11.66□□□□□ -0.54
UBR4-210ENST00000466969 FAM53BQ14153 422 aa11.66□□□□□ -0.54
UBR4-210ENST00000466969 BRD3Q15059 726 aa11.66□□□□□ -0.54
UBR4-210ENST00000466969 NDUFA9Q16795 377 aa11.66□□□□□ -0.54
UBR4-210ENST00000466969 BOLA3Q53S33 107 aa11.66□□□□□ -0.54
UBR4-210ENST00000466969 TREML4Q6UXN2 200 aa11.66□□□□□ -0.54
UBR4-210ENST00000466969 CNTD1Q8N815 330 aa11.66□□□□□ -0.54
UBR4-210ENST00000466969 OR2L8Q8NGY9 312 aa11.66□□□□□ -0.54
UBR4-210ENST00000466969 OR51Q1Q8NH59 317 aa11.66□□□□□ -0.54
UBR4-210ENST00000466969 MCOLN3Q8TDD5 553 aa11.66□□□□□ -0.54
UBR4-210ENST00000466969 GCDHQ92947 438 aaPredicted RBP11.66□□□□□ -0.54
UBR4-210ENST00000466969 ULK4Q96C45 1275 aa11.66□□□□□ -0.54
UBR4-210ENST00000466969 WFIKKN1Q96NZ8 548 aa11.66□□□□□ -0.54
UBR4-210ENST00000466969 IL17FQ96PD4 163 aa11.66□□□□□ -0.54
UBR4-210ENST00000466969 MIPEPQ99797 713 aa11.66□□□□□ -0.54
UBR4-210ENST00000466969 RHNO1Q9BSD3 238 aa11.66□□□□□ -0.54
UBR4-210ENST00000466969 RAB11FIP5Q9BXF6 653 aa11.66□□□□□ -0.54
UBR4-210ENST00000466969 GOLPH3LQ9H4A5 285 aa11.66□□□□□ -0.54
UBR4-210ENST00000466969 CHODLQ9H9P2 273 aa11.66□□□□□ -0.54
UBR4-210ENST00000466969 KCNS2Q9ULS6 477 aa11.66□□□□□ -0.54
UBR4-210ENST00000466969 LAMP3Q9UQV4 416 aa11.66□□□□□ -0.54
UBR4-210ENST00000466969 A0A0G2JMM0 328 aa11.65□□□□□ -0.54
UBR4-210ENST00000466969 A0A1W2PPB8 328 aa11.65□□□□□ -0.54
UBR4-210ENST00000466969 A0A1W2PRS3 328 aa11.65□□□□□ -0.54
UBR4-210ENST00000466969 KIR3DP1A8MWS1 328 aa11.65□□□□□ -0.54
UBR4-210ENST00000466969 H0YIG0 161 aa11.65□□□□□ -0.54
UBR4-210ENST00000466969 TXNDC9O14530 226 aa11.65□□□□□ -0.54
UBR4-210ENST00000466969 NRP2O60462 931 aa11.65□□□□□ -0.54
UBR4-210ENST00000466969 ZSCAN22P10073 491 aaPredicted RBP11.65□□□□□ -0.54
UBR4-210ENST00000466969 CCNFP41002 786 aa11.65□□□□□ -0.54
UBR4-210ENST00000466969 MTIF2P46199 727 aaKnown RBP11.65□□□□□ -0.54
UBR4-210ENST00000466969 SSR4P51571 173 aa11.65□□□□□ -0.54
UBR4-210ENST00000466969 MPP1Q00013 466 aa11.65□□□□□ -0.54
UBR4-210ENST00000466969 NAA25Q14CX7 972 aa11.65□□□□□ -0.54
UBR4-210ENST00000466969 NOMO1Q15155 1222 aa11.65□□□□□ -0.54
UBR4-210ENST00000466969 TYSND1Q2T9J0 566 aa11.65□□□□□ -0.54
UBR4-210ENST00000466969 ARMC10Q8N2F6 343 aa11.65□□□□□ -0.54
UBR4-210ENST00000466969 ZNF611Q8N823 705 aa11.65□□□□□ -0.54
UBR4-210ENST00000466969 PLPP5Q8NEB5 264 aa11.65□□□□□ -0.54
UBR4-210ENST00000466969 GTPBP3Q969Y2 492 aaKnown RBP11.65□□□□□ -0.54
UBR4-210ENST00000466969 RERGQ96A58 199 aaPredicted RBP11.65□□□□□ -0.54
UBR4-210ENST00000466969 SLC25A51Q9H1U9 297 aa11.65□□□□□ -0.54
UBR4-210ENST00000466969 PCDH18Q9HCL0 1135 aa11.65□□□□□ -0.54
UBR4-210ENST00000466969 SH2D2AQ9NP31 389 aa11.65□□□□□ -0.54
UBR4-210ENST00000466969 PARVAQ9NVD7 372 aa11.65□□□□□ -0.54
UBR4-210ENST00000466969 SLC39A10Q9ULF5 831 aa11.65□□□□□ -0.54
UBR4-210ENST00000466969 KLK4Q9Y5K2 254 aa11.65□□□□□ -0.54
UBR4-210ENST00000466969 SCINQ9Y6U3 715 aa11.65□□□□□ -0.54
UBR4-210ENST00000466969 MED12Q93074 2177 aa11.64□□□□□ -0.55
UBR4-210ENST00000466969 CNR1P21554 472 aa11.64□□□□□ -0.55
UBR4-210ENST00000466969 PTPN3P26045 913 aa11.64□□□□□ -0.55
UBR4-210ENST00000466969 CPOXP36551 454 aa11.64□□□□□ -0.55
UBR4-210ENST00000466969 ZBTB17Q13105 803 aa11.64□□□□□ -0.55
UBR4-210ENST00000466969 MAMLD1Q13495 774 aa11.64□□□□□ -0.55
UBR4-210ENST00000466969 KRT81Q14533 505 aa11.64□□□□□ -0.55
UBR4-210ENST00000466969 PAFAH1B3Q15102 231 aaKnown RBP11.64□□□□□ -0.55
UBR4-210ENST00000466969 SLC14A2Q15849 920 aa11.64□□□□□ -0.55
UBR4-210ENST00000466969 NSUN5P2Q63ZY6 315 aa11.64□□□□□ -0.55
UBR4-210ENST00000466969 VASNQ6EMK4 673 aa11.64□□□□□ -0.55
UBR4-210ENST00000466969 DPY19L2P1Q6NXN4 242 aa11.64□□□□□ -0.55
UBR4-210ENST00000466969 GPALPP1Q8IXQ4 340 aa11.64□□□□□ -0.55
UBR4-210ENST00000466969 OR9A4Q8NGU2 314 aa11.64□□□□□ -0.55
UBR4-210ENST00000466969 SPATA22Q8NHS9 363 aa11.64□□□□□ -0.55
UBR4-210ENST00000466969 CEP41Q9BYV8 373 aa11.64□□□□□ -0.55
UBR4-210ENST00000466969 HCN3Q9P1Z3 774 aa11.64□□□□□ -0.55
UBR4-210ENST00000466969 CIDEBQ9UHD4 219 aa11.64□□□□□ -0.55
UBR4-210ENST00000466969 VWFP04275 2813 aa11.63□□□□□ -0.55
UBR4-210ENST00000466969 MAGEB17A8MXT2 336 aa11.63□□□□□ -0.55
UBR4-210ENST00000466969 SNPHO15079 494 aa11.63□□□□□ -0.55
UBR4-210ENST00000466969 TMPRSS2O15393 492 aa11.63□□□□□ -0.55
UBR4-210ENST00000466969 KIAA0513O60268 411 aa11.63□□□□□ -0.55
UBR4-210ENST00000466969 RPN2P04844 631 aa11.63□□□□□ -0.55
UBR4-210ENST00000466969 RARAP10276 462 aa11.63□□□□□ -0.55
UBR4-210ENST00000466969 IL1R2P27930 398 aa11.63□□□□□ -0.55
UBR4-210ENST00000466969 PCK1P35558 622 aa11.63□□□□□ -0.55
UBR4-210ENST00000466969 DIO3P55073 304 aa11.63□□□□□ -0.55
UBR4-210ENST00000466969 PTPRCAPQ14761 206 aa11.63□□□□□ -0.55
UBR4-210ENST00000466969 SYTL3Q4VX76 610 aa11.63□□□□□ -0.55
UBR4-210ENST00000466969 CCDC183Q5T5S1 534 aa11.63□□□□□ -0.55
UBR4-210ENST00000466969 NCBP2-AS2Q69YL0 99 aa11.63□□□□□ -0.55
UBR4-210ENST00000466969 IL20RBQ6UXL0 311 aa11.63□□□□□ -0.55
UBR4-210ENST00000466969 ZNF704Q6ZNC4 412 aaPredicted RBP11.63□□□□□ -0.55
UBR4-210ENST00000466969 DNM1P46Q6ZS02 220 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms