RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 SNX6Q9UNH7 406 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 SATB2Q9UPW6 733 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 NEUROG3Q9Y4Z2 214 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 SPTBP11277 2137 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 LOC105369274A0A096LPK9 316 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 LOC102723532A0A0G2JNH3 316 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 SERTM1A2A2V5 107 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 FAM149AA5PLN7 773 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 ANKDD1BA6NHY2 528 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 FOXE1O00358 373 aaPredicted RBP14.5□□□□□ -0.09
NPHP4-205ENST00000466897 ZSCAN9O15535 394 aaPredicted RBP14.5□□□□□ -0.09
NPHP4-205ENST00000466897 HYAL3O43820 417 aaPredicted RBP14.5□□□□□ -0.09
NPHP4-205ENST00000466897 OR2B3O76000 313 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 DXOO77932 396 aaKnown RBP14.5□□□□□ -0.09
NPHP4-205ENST00000466897 KRT6AP02538 564 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 KRT6BP04259 564 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 CAPN1P07384 714 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 CHRNGP07510 517 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 SERPINA6P08185 405 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 SLC35G6P0C7Q6 338 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 UROSP10746 265 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 CCR10P46092 362 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 SLC1A6P48664 564 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 KRT6CP48668 564 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 PHEXP78562 749 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 FOXM1Q08050 763 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 GRM7Q14831 915 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 RTP5Q14D33 572 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 RBBP5Q15291 538 aaKnown RBP14.5□□□□□ -0.09
NPHP4-205ENST00000466897 ZRSR2Q15696 482 aaKnown RBP14.5□□□□□ -0.09
NPHP4-205ENST00000466897 C3orf38Q5JPI3 329 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 DCAF12Q5T6F0 453 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 GARNL3Q5VVW2 1013 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 FRG2Q64ET8 278 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 PLD3Q8IV08 490 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 GPR135Q8IZ08 494 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 OR4N4Q8N0Y3 316 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 ARHGEF39Q8N4T4 335 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 CSNK1A1LQ8N752 337 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 CDYL2Q8N8U2 506 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 OR1L3Q8NH93 324 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 CREB3L4Q8TEY5 395 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 ZNF473Q8WTR7 871 aaKnown RBP14.5□□□□□ -0.09
NPHP4-205ENST00000466897 SLC13A3Q8WWT9 602 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 ZNF75CPQ92670 426 aaPredicted RBP14.5□□□□□ -0.09
NPHP4-205ENST00000466897 USP7Q93009 1102 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 MAGEB18Q96M61 343 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 FRG2BQ96QU4 278 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 SLC6A16Q9GZN6 736 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 SLC39A1Q9NY26 324 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 SRPK3Q9UPE1 567 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 RAP2CQ9Y3L5 183 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 PCDHB3Q9Y5E6 796 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 FER1L5A0AVI2 2057 aa14.5□□□□□ -0.09
NPHP4-205ENST00000466897 HSPA4LO95757 839 aa14.49□□□□□ -0.09
NPHP4-205ENST00000466897 HSD3B1P14060 373 aa14.49□□□□□ -0.09
NPHP4-205ENST00000466897 ITIH1P19827 911 aa14.49□□□□□ -0.09
NPHP4-205ENST00000466897 HSD3B2P26439 372 aa14.49□□□□□ -0.09
NPHP4-205ENST00000466897 ETV5P41161 510 aa14.49□□□□□ -0.09
NPHP4-205ENST00000466897 ATP1A2P50993 1020 aa14.49□□□□□ -0.09
NPHP4-205ENST00000466897 ARFIP1P53367 373 aa14.49□□□□□ -0.09
NPHP4-205ENST00000466897 ARSFP54793 590 aa14.49□□□□□ -0.09
NPHP4-205ENST00000466897 VSX2P58304 361 aaPredicted RBP14.49□□□□□ -0.09
NPHP4-205ENST00000466897 OCRLQ01968 901 aa14.49□□□□□ -0.09
NPHP4-205ENST00000466897 RGS1Q08116 209 aa14.49□□□□□ -0.09
NPHP4-205ENST00000466897 FOXC1Q12948 553 aa14.49□□□□□ -0.09
NPHP4-205ENST00000466897 IFT88Q13099 833 aa14.49□□□□□ -0.09
NPHP4-205ENST00000466897 ADPRMQ3LIE5 342 aa14.49□□□□□ -0.09
NPHP4-205ENST00000466897 WASHC2DQ5SRD0 308 aa14.49□□□□□ -0.09
NPHP4-205ENST00000466897 TMEM164Q5U3C3 297 aa14.49□□□□□ -0.09
NPHP4-205ENST00000466897 KANK2Q63ZY3 851 aa14.49□□□□□ -0.09
NPHP4-205ENST00000466897 ATG14Q6ZNE5 492 aa14.49□□□□□ -0.09
NPHP4-205ENST00000466897 VN1R5Q7Z5H4 357 aa14.49□□□□□ -0.09
NPHP4-205ENST00000466897 HUS1BQ8NHY5 278 aa14.49□□□□□ -0.09
NPHP4-205ENST00000466897 METTL6Q8TCB7 284 aa14.49□□□□□ -0.09
NPHP4-205ENST00000466897 LRRC8CQ8TDW0 803 aa14.49□□□□□ -0.09
NPHP4-205ENST00000466897 SORT1Q99523 831 aa14.49□□□□□ -0.09
NPHP4-205ENST00000466897 C20orf27Q9GZN8 174 aa14.49□□□□□ -0.09
NPHP4-205ENST00000466897 ILKAPQ9H0C8 392 aaPredicted RBP14.49□□□□□ -0.09
NPHP4-205ENST00000466897 ELOVL6Q9H5J4 265 aa14.49□□□□□ -0.09
NPHP4-205ENST00000466897 CCDC134Q9H6E4 229 aa14.49□□□□□ -0.09
NPHP4-205ENST00000466897 BRF2Q9HAW0 419 aa14.49□□□□□ -0.09
NPHP4-205ENST00000466897 PISDQ9UG56 409 aa14.49□□□□□ -0.09
NPHP4-205ENST00000466897 PCDHGA7Q9Y5G6 932 aa14.49□□□□□ -0.09
NPHP4-205ENST00000466897 URADA6NGE7 173 aa14.48□□□□□ -0.09
NPHP4-205ENST00000466897 AZIN1O14977 448 aa14.48□□□□□ -0.09
NPHP4-205ENST00000466897 NVLO15381 856 aaKnown RBP14.48□□□□□ -0.09
NPHP4-205ENST00000466897 P2RX6O15547 441 aa14.48□□□□□ -0.09
NPHP4-205ENST00000466897 NDUFS4O43181 175 aa14.48□□□□□ -0.09
NPHP4-205ENST00000466897 ITM2AO43736 263 aa14.48□□□□□ -0.09
NPHP4-205ENST00000466897 ULK1O75385 1050 aa14.48□□□□□ -0.09
NPHP4-205ENST00000466897 ADRB1P08588 477 aa14.48□□□□□ -0.09
NPHP4-205ENST00000466897 HBQ1P09105 142 aa14.48□□□□□ -0.09
NPHP4-205ENST00000466897 HMOX2P30519 316 aa14.48□□□□□ -0.09
NPHP4-205ENST00000466897 HK2P52789 917 aa14.48□□□□□ -0.09
NPHP4-205ENST00000466897 STXBP1P61764 594 aaKnown RBP14.48□□□□□ -0.09
NPHP4-205ENST00000466897 GABREP78334 506 aa14.48□□□□□ -0.09
NPHP4-205ENST00000466897 HYAL2Q12891 473 aa14.48□□□□□ -0.09
NPHP4-205ENST00000466897 CSTF3Q12996 717 aaKnown RBP14.48□□□□□ -0.09
NPHP4-205ENST00000466897 FAM53BQ14153 422 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms