RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 FRA10AC1Q70Z53 315 aa16.57■□□□□ 0.24
COL7A1-206ENST00000466591 VN1R4Q7Z5H5 301 aa16.57■□□□□ 0.24
COL7A1-206ENST00000466591 SLC26A11Q86WA9 606 aa16.57■□□□□ 0.24
COL7A1-206ENST00000466591 KCT2Q8NC54 265 aa16.57■□□□□ 0.24
COL7A1-206ENST00000466591 HAS2Q92819 552 aa16.57■□□□□ 0.24
COL7A1-206ENST00000466591 PYCR2Q96C36 320 aa16.57■□□□□ 0.24
COL7A1-206ENST00000466591 CYTH2Q99418 400 aa16.57■□□□□ 0.24
COL7A1-206ENST00000466591 EGFL8Q99944 293 aa16.57■□□□□ 0.24
COL7A1-206ENST00000466591 GRPEL1Q9HAV7 217 aa16.57■□□□□ 0.24
COL7A1-206ENST00000466591 VWA7Q9Y334 891 aa16.57■□□□□ 0.24
COL7A1-206ENST00000466591 NAV2Q8IVL1 2488 aa16.57■□□□□ 0.24
COL7A1-206ENST00000466591 LOC102723996A0A087X1L8 192 aa16.56■□□□□ 0.24
COL7A1-206ENST00000466591 A0A1B0GUH1 482 aa16.56■□□□□ 0.24
COL7A1-206ENST00000466591 OR5H15A6NDH6 313 aa16.56■□□□□ 0.24
COL7A1-206ENST00000466591 ZNF860A6NHJ4 632 aa16.56■□□□□ 0.24
COL7A1-206ENST00000466591 WDPCPO95876 746 aa16.56■□□□□ 0.24
COL7A1-206ENST00000466591 CYC1P08574 325 aa16.56■□□□□ 0.24
COL7A1-206ENST00000466591 ELK3P41970 407 aa16.56■□□□□ 0.24
COL7A1-206ENST00000466591 SLC12A2P55011 1212 aa16.56■□□□□ 0.24
COL7A1-206ENST00000466591 TAS2R50P59544 299 aa16.56■□□□□ 0.24
COL7A1-206ENST00000466591 GNG11P61952 73 aa16.56■□□□□ 0.24
COL7A1-206ENST00000466591 MEF2AQ02078 507 aaPredicted RBP16.56■□□□□ 0.24
COL7A1-206ENST00000466591 NSDHLQ15738 373 aa16.56■□□□□ 0.24
COL7A1-206ENST00000466591 EXT1Q16394 746 aa16.56■□□□□ 0.24
COL7A1-206ENST00000466591 PHKG1Q16816 387 aa16.56■□□□□ 0.24
COL7A1-206ENST00000466591 NIPAL1Q6NVV3 410 aa16.56■□□□□ 0.24
COL7A1-206ENST00000466591 TMEM205Q6UW68 189 aa16.56■□□□□ 0.24
COL7A1-206ENST00000466591 GFRALQ6UXV0 394 aa16.56■□□□□ 0.24
COL7A1-206ENST00000466591 LANCL3Q6ZV70 420 aa16.56■□□□□ 0.24
COL7A1-206ENST00000466591 ABHD13Q7L211 337 aa16.56■□□□□ 0.24
COL7A1-206ENST00000466591 PRSS41Q7RTY9 318 aa16.56■□□□□ 0.24
COL7A1-206ENST00000466591 CNTN4Q8IWV2 1026 aa16.56■□□□□ 0.24
COL7A1-206ENST00000466591 MFSD9Q8NBP5 474 aa16.56■□□□□ 0.24
COL7A1-206ENST00000466591 SNF8Q96H20 258 aa16.56■□□□□ 0.24
COL7A1-206ENST00000466591 PEX11GQ96HA9 241 aa16.56■□□□□ 0.24
COL7A1-206ENST00000466591 ZNF354BQ96LW1 612 aa16.56■□□□□ 0.24
COL7A1-206ENST00000466591 TRIM31Q9BZY9 425 aa16.56■□□□□ 0.24
COL7A1-206ENST00000466591 SLC17A6Q9P2U8 582 aa16.56■□□□□ 0.24
COL7A1-206ENST00000466591 URADA6NGE7 173 aa16.55■□□□□ 0.24
COL7A1-206ENST00000466591 PSMD12O00232 456 aaPredicted RBP16.55■□□□□ 0.24
COL7A1-206ENST00000466591 NDC80O14777 642 aa16.55■□□□□ 0.24
COL7A1-206ENST00000466591 ENO2P09104 434 aaPredicted RBP16.55■□□□□ 0.24
COL7A1-206ENST00000466591 JAK1P23458 1154 aa16.55■□□□□ 0.24
COL7A1-206ENST00000466591 COL8A1P27658 744 aa16.55■□□□□ 0.24
COL7A1-206ENST00000466591 SOX11P35716 441 aa16.55■□□□□ 0.24
COL7A1-206ENST00000466591 RBPJQ06330 500 aa16.55■□□□□ 0.24
COL7A1-206ENST00000466591 ABRAXAS2Q15018 415 aa16.55■□□□□ 0.24
COL7A1-206ENST00000466591 MSS51Q4VC12 460 aa16.55■□□□□ 0.24
COL7A1-206ENST00000466591 FJX1Q86VR8 437 aa16.55■□□□□ 0.24
COL7A1-206ENST00000466591 ANKMY2Q8IV38 441 aa16.55■□□□□ 0.24
COL7A1-206ENST00000466591 SLC5A11Q8WWX8 675 aa16.55■□□□□ 0.24
COL7A1-206ENST00000466591 PSMF1Q92530 271 aa16.55■□□□□ 0.24
COL7A1-206ENST00000466591 LRRC39Q96DD0 335 aa16.55■□□□□ 0.24
COL7A1-206ENST00000466591 TSNARE1Q96NA8 513 aa16.55■□□□□ 0.24
COL7A1-206ENST00000466591 LPAR4Q99677 370 aa16.55■□□□□ 0.24
COL7A1-206ENST00000466591 BARD1Q99728 777 aaKnown RBP16.55■□□□□ 0.24
COL7A1-206ENST00000466591 SGPP1Q9BX95 441 aa16.55■□□□□ 0.24
COL7A1-206ENST00000466591 TXNDC16Q9P2K2 825 aa16.55■□□□□ 0.24
COL7A1-206ENST00000466591 SUCOQ9UBS9 1254 aaKnown RBP16.55■□□□□ 0.24
COL7A1-206ENST00000466591 SH2B3Q9UQQ2 575 aa16.55■□□□□ 0.24
COL7A1-206ENST00000466591 USP9YO00507 2555 aaPredicted RBP16.54■□□□□ 0.24
COL7A1-206ENST00000466591 A0A1W2PQ72 361 aa16.54■□□□□ 0.24
COL7A1-206ENST00000466591 PRAMEF2O60811 474 aa16.54■□□□□ 0.24
COL7A1-206ENST00000466591 MLYCDO95822 493 aa16.54■□□□□ 0.24
COL7A1-206ENST00000466591 NPPBP16860 134 aa16.54■□□□□ 0.24
COL7A1-206ENST00000466591 IL10P22301 178 aa16.54■□□□□ 0.24
COL7A1-206ENST00000466591 GABRB3P28472 473 aa16.54■□□□□ 0.24
COL7A1-206ENST00000466591 CASP6P55212 293 aa16.54■□□□□ 0.24
COL7A1-206ENST00000466591 OC90Q02509 493 aaPredicted RBP16.54■□□□□ 0.24
COL7A1-206ENST00000466591 NAA30Q147X3 362 aaPredicted RBP16.54■□□□□ 0.24
COL7A1-206ENST00000466591 RBBP5Q15291 538 aaKnown RBP16.54■□□□□ 0.24
COL7A1-206ENST00000466591 DEFB134Q4QY38 66 aa16.54■□□□□ 0.24
COL7A1-206ENST00000466591 TEDDM1Q5T9Z0 273 aa16.54■□□□□ 0.24
COL7A1-206ENST00000466591 C1QL3Q5VWW1 255 aa16.54■□□□□ 0.24
COL7A1-206ENST00000466591 PLAG1Q6DJT9 500 aa16.54■□□□□ 0.24
COL7A1-206ENST00000466591 TMEM207Q6UWW9 146 aa16.54■□□□□ 0.24
COL7A1-206ENST00000466591 ANKRD37Q7Z713 158 aa16.54■□□□□ 0.24
COL7A1-206ENST00000466591 GALNT7Q86SF2 657 aa16.54■□□□□ 0.24
COL7A1-206ENST00000466591 TMPRSS11BQ86T26 416 aa16.54■□□□□ 0.24
COL7A1-206ENST00000466591 CYP4X1Q8N118 509 aa16.54■□□□□ 0.24
COL7A1-206ENST00000466591 ARHGEF39Q8N4T4 335 aa16.54■□□□□ 0.24
COL7A1-206ENST00000466591 SLC5A8Q8N695 610 aa16.54■□□□□ 0.24
COL7A1-206ENST00000466591 NR4A3Q92570 626 aa16.54■□□□□ 0.24
COL7A1-206ENST00000466591 SLCO2A1Q92959 643 aa16.54■□□□□ 0.24
COL7A1-206ENST00000466591 VPS39Q96JC1 886 aa16.54■□□□□ 0.24
COL7A1-206ENST00000466591 AIF1LQ9BQI0 150 aa16.54■□□□□ 0.24
COL7A1-206ENST00000466591 SEC14L3Q9UDX4 400 aa16.54■□□□□ 0.24
COL7A1-206ENST00000466591 SLC22A7Q9Y694 548 aa16.54■□□□□ 0.24
COL7A1-206ENST00000466591 DOCK10Q96BY6 2186 aa16.54■□□□□ 0.24
COL7A1-206ENST00000466591 MDC1Q14676 2089 aaKnown RBP16.54■□□□□ 0.24
COL7A1-206ENST00000466591 HEATR5BQ9P2D3 2071 aa16.54■□□□□ 0.24
COL7A1-206ENST00000466591 USP9XQ93008 2570 aaPredicted RBP16.53■□□□□ 0.24
COL7A1-206ENST00000466591 TRGV8A0A0C4DH27 118 aa16.53■□□□□ 0.24
COL7A1-206ENST00000466591 TRBC2A0A5B9 178 aa16.53■□□□□ 0.24
COL7A1-206ENST00000466591 E2F3O00716 465 aa16.53■□□□□ 0.24
COL7A1-206ENST00000466591 LCMT2O60294 686 aaKnown RBP16.53■□□□□ 0.24
COL7A1-206ENST00000466591 UNC5CO95185 931 aa16.53■□□□□ 0.24
COL7A1-206ENST00000466591 CLDN1O95832 211 aa16.53■□□□□ 0.24
COL7A1-206ENST00000466591 HNF4AP41235 474 aa16.53■□□□□ 0.24
COL7A1-206ENST00000466591 ITGA8P53708 1063 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms