RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 MAGEB16A2A368 324 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 ANTXRLA6NF34 631 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 ANKDD1BA6NHY2 528 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 M0R296 226 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 CCL24O00175 119 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 NME6O75414 186 aaPredicted RBP3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 GRAP2O75791 330 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 ZNF432O94892 652 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 UMODP07911 640 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 DLATP10515 647 aaKnown RBP3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 STMN1P16949 149 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 CEBPBP17676 345 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 RBMS1P29558 406 aaKnown RBP3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 CHRNB4P30926 498 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 SERPINB6P35237 376 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 SERPINH1P50454 418 aaKnown RBP3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 NME5P56597 212 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 RPP38P78345 283 aaKnown RBP3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 NPRL3Q12980 569 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 SRSF9Q13242 221 aaKnown RBP eCLIP3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 ZNF74Q16587 644 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 ARMCX4Q5H9R4 360 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 LCE1AQ5T7P2 110 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 ARHGEF16Q5VV41 709 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 KCTD11Q693B1 232 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 PM20D1Q6GTS8 502 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 LEKR1Q6ZMV7 388 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 MACC1Q6ZN28 852 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 SLC24A5Q71RS6 500 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 PRSS42Q7Z5A4 293 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 APLFQ8IW19 511 aaPredicted RBP3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 AQP12AQ8IXF9 295 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 LRTM2Q8N967 370 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 NAT8LQ8N9F0 302 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 ZNRF4Q8WWF5 429 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 ARHGAP45Q92619 1136 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 SNX21Q969T3 373 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 AP2M1Q96CW1 435 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 C5orf30Q96GV9 206 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 PANX3Q96QZ0 392 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 F2RL3Q96RI0 385 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 ATP6V0BQ99437 205 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 NAPBQ9H115 298 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 CUEDC2Q9H467 287 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 MAGEF1Q9HAY2 307 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 SLC52A3Q9NQ40 469 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 ZNF71Q9NQZ8 489 aaPredicted RBP3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 TBC1D13Q9NVG8 400 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 PILRBQ9UKJ0 227 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 PROCRQ9UNN8 238 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 ZNF510Q9Y2H8 683 aa3.87□□□□□ -1.79
CDC42BPA-211ENST00000466538 ARID2Q68CP9 1835 aa3.86□□□□□ -1.79
CDC42BPA-211ENST00000466538 ABCC9O60706 1549 aa3.86□□□□□ -1.79
CDC42BPA-211ENST00000466538 SPATA31D1Q6ZQQ2 1576 aa3.86□□□□□ -1.79
CDC42BPA-211ENST00000466538 A0A087WUV0 522 aaPredicted RBP3.86□□□□□ -1.79
CDC42BPA-211ENST00000466538 A0A087X0K7 114 aa3.86□□□□□ -1.79
CDC42BPA-211ENST00000466538 SNURFLB1AK76 121 aa3.86□□□□□ -1.79
CDC42BPA-211ENST00000466538 IKBKBO14920 756 aa3.86□□□□□ -1.79
CDC42BPA-211ENST00000466538 ACSL4O60488 711 aa3.86□□□□□ -1.79
CDC42BPA-211ENST00000466538 TRMUO75648 421 aaKnown RBP3.86□□□□□ -1.79
CDC42BPA-211ENST00000466538 CDC123O75794 336 aaPredicted RBP3.86□□□□□ -1.79
CDC42BPA-211ENST00000466538 SEC24AO95486 1093 aa3.86□□□□□ -1.79
CDC42BPA-211ENST00000466538 OLFM2O95897 454 aa3.86□□□□□ -1.79
CDC42BPA-211ENST00000466538 HMBSP08397 361 aa3.86□□□□□ -1.79
CDC42BPA-211ENST00000466538 CD48P09326 243 aa3.86□□□□□ -1.79
CDC42BPA-211ENST00000466538 STXBP2Q15833 593 aa3.86□□□□□ -1.79
CDC42BPA-211ENST00000466538 ZNF542PQ5EBM4 170 aa3.86□□□□□ -1.79
CDC42BPA-211ENST00000466538 FAM53AQ6NSI3 398 aaPredicted RBP3.86□□□□□ -1.79
CDC42BPA-211ENST00000466538 NR2C2APQ86WQ0 139 aa3.86□□□□□ -1.79
CDC42BPA-211ENST00000466538 ZNF444Q8N0Y2 327 aaPredicted RBP3.86□□□□□ -1.79
CDC42BPA-211ENST00000466538 ZNF843Q8N446 348 aa3.86□□□□□ -1.79
CDC42BPA-211ENST00000466538 GPRC5AQ8NFJ5 357 aa3.86□□□□□ -1.79
CDC42BPA-211ENST00000466538 OR5AP2Q8NGF4 316 aa3.86□□□□□ -1.79
CDC42BPA-211ENST00000466538 CCDC47Q96A33 483 aaKnown RBP3.86□□□□□ -1.79
CDC42BPA-211ENST00000466538 NXPE2Q96DL1 559 aa3.86□□□□□ -1.79
CDC42BPA-211ENST00000466538 PGLYRP2Q96PD5 576 aa3.86□□□□□ -1.79
CDC42BPA-211ENST00000466538 DUX3Q96PT4 197 aa3.86□□□□□ -1.79
CDC42BPA-211ENST00000466538 FUCA2Q9BTY2 467 aa3.86□□□□□ -1.79
CDC42BPA-211ENST00000466538 ACAT2Q9BWD1 397 aa3.86□□□□□ -1.79
CDC42BPA-211ENST00000466538 OSBPL8Q9BZF1 889 aa3.86□□□□□ -1.79
CDC42BPA-211ENST00000466538 C5orf66Q9H5L9 145 aa3.86□□□□□ -1.79
CDC42BPA-211ENST00000466538 MAN2C1Q9NTJ4 1040 aa3.86□□□□□ -1.79
CDC42BPA-211ENST00000466538 SELENOKQ9Y6D0 94 aa3.86□□□□□ -1.79
CDC42BPA-211ENST00000466538 DISP3Q9P2K9 1392 aa3.86□□□□□ -1.79
CDC42BPA-211ENST00000466538 A0A087WW49 117 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 C2orf92A0A1B0GVN3 265 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 SMIM30A4D0T7 59 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 MTMR11A4FU01 709 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 NKX6-3A6NJ46 265 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 A8MVM7 634 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 E5RGE8 158 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 FPGTO14772 594 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 PGRMC2O15173 223 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 KIF5CO60282 957 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 CYTIPO60759 359 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 THEGLP0DJG4 465 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 CEACAM1P13688 526 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 GOT1P17174 413 aa3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 RPL35AP18077 110 aaKnown RBP3.85□□□□□ -1.79
CDC42BPA-211ENST00000466538 AADACP22760 399 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms