RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 PHKG1Q16816 387 aa18.09■□□□□ 0.49
COL9A3-206ENST00000466532 BTBD16Q32M84 506 aa18.09■□□□□ 0.49
COL9A3-206ENST00000466532 SPANXN3Q5MJ09 141 aa18.09■□□□□ 0.49
COL9A3-206ENST00000466532 LCTLQ6UWM7 567 aa18.09■□□□□ 0.49
COL9A3-206ENST00000466532 SLC26A11Q86WA9 606 aa18.09■□□□□ 0.49
COL9A3-206ENST00000466532 PDSS2Q86YH6 399 aa18.09■□□□□ 0.49
COL9A3-206ENST00000466532 SLC35F6Q8N357 371 aa18.09■□□□□ 0.49
COL9A3-206ENST00000466532 SLC13A3Q8WWT9 602 aa18.09■□□□□ 0.49
COL9A3-206ENST00000466532 HIST1H2AHQ96KK5 128 aa18.09■□□□□ 0.49
COL9A3-206ENST00000466532 HIST1H2AJQ99878 128 aa18.09■□□□□ 0.49
COL9A3-206ENST00000466532 H2AFJQ9BTM1 129 aa18.09■□□□□ 0.49
COL9A3-206ENST00000466532 SGPP1Q9BX95 441 aa18.09■□□□□ 0.49
COL9A3-206ENST00000466532 ASIC3Q9UHC3 531 aa18.09■□□□□ 0.49
COL9A3-206ENST00000466532 OR2W5A6NFC9 320 aa18.08■□□□□ 0.48
COL9A3-206ENST00000466532 A8MUI8 341 aa18.08■□□□□ 0.48
COL9A3-206ENST00000466532 DNALI1O14645 258 aaPredicted RBP18.08■□□□□ 0.48
COL9A3-206ENST00000466532 PRAMEF2O60811 474 aa18.08■□□□□ 0.48
COL9A3-206ENST00000466532 RDH16O75452 317 aa18.08■□□□□ 0.48
COL9A3-206ENST00000466532 CRYABP02511 175 aaKnown RBP18.08■□□□□ 0.48
COL9A3-206ENST00000466532 AHSGP02765 367 aa18.08■□□□□ 0.48
COL9A3-206ENST00000466532 SLC35G6P0C7Q6 338 aa18.08■□□□□ 0.48
COL9A3-206ENST00000466532 MYBL2P10244 700 aa18.08■□□□□ 0.48
COL9A3-206ENST00000466532 PLAG1Q6DJT9 500 aa18.08■□□□□ 0.48
COL9A3-206ENST00000466532 CAPN13Q6MZZ7 669 aaPredicted RBP18.08■□□□□ 0.48
COL9A3-206ENST00000466532 GFRALQ6UXV0 394 aa18.08■□□□□ 0.48
COL9A3-206ENST00000466532 ANKRD37Q7Z713 158 aa18.08■□□□□ 0.48
COL9A3-206ENST00000466532 MFSD9Q8NBP5 474 aa18.08■□□□□ 0.48
COL9A3-206ENST00000466532 FAM129AQ9BZQ8 928 aa18.08■□□□□ 0.48
COL9A3-206ENST00000466532 NAALAD2Q9Y3Q0 740 aa18.08■□□□□ 0.48
COL9A3-206ENST00000466532 MYO9AB2RTY4 2548 aa18.08■□□□□ 0.48
COL9A3-206ENST00000466532 PABPN1LA6NDY0 278 aaKnown RBP18.07■□□□□ 0.48
COL9A3-206ENST00000466532 NPPBP16860 134 aa18.07■□□□□ 0.48
COL9A3-206ENST00000466532 AGTR2P50052 363 aa18.07■□□□□ 0.48
COL9A3-206ENST00000466532 SRSF11Q05519 484 aaKnown RBP18.07■□□□□ 0.48
COL9A3-206ENST00000466532 MSS51Q4VC12 460 aa18.07■□□□□ 0.48
COL9A3-206ENST00000466532 FCRLBQ6BAA4 426 aa18.07■□□□□ 0.48
COL9A3-206ENST00000466532 KIAA0408Q6ZU52 694 aa18.07■□□□□ 0.48
COL9A3-206ENST00000466532 PCGF5Q86SE9 256 aa18.07■□□□□ 0.48
COL9A3-206ENST00000466532 CNTN4Q8IWV2 1026 aa18.07■□□□□ 0.48
COL9A3-206ENST00000466532 SLC34A3Q8N130 599 aa18.07■□□□□ 0.48
COL9A3-206ENST00000466532 DNAJB8Q8NHS0 232 aa18.07■□□□□ 0.48
COL9A3-206ENST00000466532 PYCR2Q96C36 320 aa18.07■□□□□ 0.48
COL9A3-206ENST00000466532 CERS2Q96G23 380 aa18.07■□□□□ 0.48
COL9A3-206ENST00000466532 HAUS8Q9BT25 410 aa18.07■□□□□ 0.48
COL9A3-206ENST00000466532 NAT9Q9BTE0 207 aa18.07■□□□□ 0.48
COL9A3-206ENST00000466532 RBCK1Q9BYM8 510 aa18.07■□□□□ 0.48
COL9A3-206ENST00000466532 KCNK13Q9HB14 408 aa18.07■□□□□ 0.48
COL9A3-206ENST00000466532 ARL15Q9NXU5 204 aa18.07■□□□□ 0.48
COL9A3-206ENST00000466532 ABI3Q9P2A4 366 aa18.07■□□□□ 0.48
COL9A3-206ENST00000466532 SLC17A6Q9P2U8 582 aa18.07■□□□□ 0.48
COL9A3-206ENST00000466532 SLC22A7Q9Y694 548 aa18.07■□□□□ 0.48
COL9A3-206ENST00000466532 CREBBPQ92793 2442 aa18.06■□□□□ 0.48
COL9A3-206ENST00000466532 ZNF860A6NHJ4 632 aa18.06■□□□□ 0.48
COL9A3-206ENST00000466532 UNC5CO95185 931 aa18.06■□□□□ 0.48
COL9A3-206ENST00000466532 TSPAN12O95859 305 aa18.06■□□□□ 0.48
COL9A3-206ENST00000466532 MST1P26927 711 aa18.06■□□□□ 0.48
COL9A3-206ENST00000466532 CCR8P51685 355 aa18.06■□□□□ 0.48
COL9A3-206ENST00000466532 IL2P60568 153 aa18.06■□□□□ 0.48
COL9A3-206ENST00000466532 MEF2AQ02078 507 aaPredicted RBP18.06■□□□□ 0.48
COL9A3-206ENST00000466532 PDAP1Q13442 181 aaKnown RBP18.06■□□□□ 0.48
COL9A3-206ENST00000466532 BBS9Q3SYG4 887 aa18.06■□□□□ 0.48
COL9A3-206ENST00000466532 DUPD1Q68J44 220 aa18.06■□□□□ 0.48
COL9A3-206ENST00000466532 BEST3Q8N1M1 668 aa18.06■□□□□ 0.48
COL9A3-206ENST00000466532 RELTQ969Z4 430 aa18.06■□□□□ 0.48
COL9A3-206ENST00000466532 PEX11GQ96HA9 241 aa18.06■□□□□ 0.48
COL9A3-206ENST00000466532 ZNF354BQ96LW1 612 aa18.06■□□□□ 0.48
COL9A3-206ENST00000466532 DDX47Q9H0S4 455 aaKnown RBP18.06■□□□□ 0.48
COL9A3-206ENST00000466532 PPANQ9NQ55 473 aaKnown RBP18.06■□□□□ 0.48
COL9A3-206ENST00000466532 SNX12Q9UMY4 172 aa18.06■□□□□ 0.48
COL9A3-206ENST00000466532 LRBAP50851 2863 aa18.05■□□□□ 0.48
COL9A3-206ENST00000466532 CES2O00748 559 aa18.05■□□□□ 0.48
COL9A3-206ENST00000466532 NDUFS4O43181 175 aa18.05■□□□□ 0.48
COL9A3-206ENST00000466532 OR1F1O43749 312 aa18.05■□□□□ 0.48
COL9A3-206ENST00000466532 CDC123O75794 336 aaPredicted RBP18.05■□□□□ 0.48
COL9A3-206ENST00000466532 PGGT1BP53609 377 aa18.05■□□□□ 0.48
COL9A3-206ENST00000466532 PMP22Q01453 160 aa18.05■□□□□ 0.48
COL9A3-206ENST00000466532 EXT1Q16394 746 aa18.05■□□□□ 0.48
COL9A3-206ENST00000466532 ZXDCQ2QGD7 858 aaPredicted RBP18.05■□□□□ 0.48
COL9A3-206ENST00000466532 ZNF766Q5HY98 468 aa18.05■□□□□ 0.48
COL9A3-206ENST00000466532 ACER2Q5QJU3 275 aa18.05■□□□□ 0.48
COL9A3-206ENST00000466532 H3F3CQ6NXT2 135 aa18.05■□□□□ 0.48
COL9A3-206ENST00000466532 TMEM207Q6UWW9 146 aa18.05■□□□□ 0.48
COL9A3-206ENST00000466532 GALNT7Q86SF2 657 aa18.05■□□□□ 0.48
COL9A3-206ENST00000466532 IGDCC3Q8IVU1 814 aa18.05■□□□□ 0.48
COL9A3-206ENST00000466532 GPATCH11Q8N954 259 aa18.05■□□□□ 0.48
COL9A3-206ENST00000466532 ABHD11Q8NFV4 315 aa18.05■□□□□ 0.48
COL9A3-206ENST00000466532 OR5T3Q8NGG3 340 aa18.05■□□□□ 0.48
COL9A3-206ENST00000466532 M1APQ8TC57 530 aa18.05■□□□□ 0.48
COL9A3-206ENST00000466532 SNF8Q96H20 258 aa18.05■□□□□ 0.48
COL9A3-206ENST00000466532 TRIM54Q9BYV2 358 aa18.05■□□□□ 0.48
COL9A3-206ENST00000466532 COPG2Q9UBF2 871 aa18.05■□□□□ 0.48
COL9A3-206ENST00000466532 SEC14L3Q9UDX4 400 aa18.05■□□□□ 0.48
COL9A3-206ENST00000466532 GTF3C1Q12789 2109 aa18.04■□□□□ 0.48
COL9A3-206ENST00000466532 TRGV8A0A0C4DH27 118 aa18.04■□□□□ 0.48
COL9A3-206ENST00000466532 IL10P22301 178 aa18.04■□□□□ 0.48
COL9A3-206ENST00000466532 AP1S2P56377 157 aa18.04■□□□□ 0.48
COL9A3-206ENST00000466532 RHAGQ02094 409 aa18.04■□□□□ 0.48
COL9A3-206ENST00000466532 ACTN3Q08043 901 aaPredicted RBP18.04■□□□□ 0.48
COL9A3-206ENST00000466532 ABRAXAS2Q15018 415 aa18.04■□□□□ 0.48
COL9A3-206ENST00000466532 HERC3Q15034 1050 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms