RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 SNX15Q9NRS6 342 aa9.28□□□□□ -0.92
RTFDC1-205ENST00000466260 SLC22A11Q9NSA0 550 aa9.28□□□□□ -0.92
RTFDC1-205ENST00000466260 TMEM184CQ9NVA4 438 aa9.28□□□□□ -0.92
RTFDC1-205ENST00000466260 CD274Q9NZQ7 290 aa9.28□□□□□ -0.92
RTFDC1-205ENST00000466260 CTSFQ9UBX1 484 aa9.28□□□□□ -0.92
RTFDC1-205ENST00000466260 RNF112Q9ULX5 631 aa9.28□□□□□ -0.92
RTFDC1-205ENST00000466260 MRPS2Q9Y399 296 aaKnown RBP9.28□□□□□ -0.92
RTFDC1-205ENST00000466260 KLK4Q9Y5K2 254 aa9.28□□□□□ -0.92
RTFDC1-205ENST00000466260 KCNMB2Q9Y691 235 aa9.28□□□□□ -0.92
RTFDC1-205ENST00000466260 ITPR1Q14643 2758 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 NBEAQ8NFP9 2946 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 CACNA1GO43497 2377 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 A6NL46 340 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 OR1F1O43749 312 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 LCMT2O60294 686 aaKnown RBP9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 ALOX12BO75342 701 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 WISP3O95389 354 aaPredicted RBP9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 FAM107AO95990 144 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 S100BP04271 92 aaPredicted RBP9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 SLC35E2BP0CK96 405 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 PIM1P11309 404 aaPredicted RBP9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 TFEBP19484 476 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 VARSP26640 1264 aaKnown RBP9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 LSP1P33241 339 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 HSPA7P48741 367 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 CCL11P51671 97 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 CCR8P51685 355 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 CORO7P57737 925 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 ATP6V0D1P61421 351 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 RPS15AP62244 130 aaKnown RBP9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 SNRPNP63162 240 aaKnown RBP9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 MAT1AQ00266 395 aaKnown RBP9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 DLG1Q12959 904 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 RAPSNQ13702 412 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 RBBP5Q15291 538 aaKnown RBP9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 TTMPQ5BVD1 217 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 VWA2Q5GFL6 755 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 MFSD4BQ5TF39 518 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 YOD1Q5VVQ6 348 aaPredicted RBP9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 FAAH2Q6GMR7 532 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 MRPL14Q6P1L8 145 aaKnown RBP9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 CYS1Q717R9 158 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 PRSS41Q7RTY9 318 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 PRICKLE2Q7Z3G6 844 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 VN1R4Q7Z5H5 301 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 ASPGQ86U10 573 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 RIBC1Q8N443 379 aaPredicted RBP9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 ZNF843Q8N446 348 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 SNX31Q8N9S9 440 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 ZNF740Q8NDX6 193 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 C9orf43Q8TAL5 461 aaPredicted RBP9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 NXNL1Q96CM4 212 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 ABHD17AQ96GS6 310 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 ZNF285Q96NJ3 590 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 PAFAH2Q99487 392 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 TMEM79Q9BSE2 394 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 DHRS4Q9BTZ2 278 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 VPS11Q9H270 941 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 ACSS3Q9H6R3 686 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 NOVA2Q9UNW9 492 aaKnown RBP9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 TP53TG5Q9Y2B4 290 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 IKBKGQ9Y6K9 419 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 ZFYVE26Q68DK2 2539 aa9.27□□□□□ -0.93
RTFDC1-205ENST00000466260 A0A096LPK6 155 aa9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 EXOC1LA0A1B0GW35 172 aa9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 FITM1A5D6W6 292 aa9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 ZNF860A6NHJ4 632 aa9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 PYCARD-AS1I3L0S3 204 aa9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 UBXN8O00124 270 aa9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 CLGNO14967 610 aa9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 RGS16O15492 202 aaPredicted RBP9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 TAPBPO15533 448 aa9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 NDUFS4O43181 175 aa9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 CCNT2O60583 730 aaKnown RBP9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 RFPL1O75677 317 aa9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 KLF7O75840 302 aaPredicted RBP9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 C2P06681 752 aa9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 LTA4HP09960 611 aaKnown RBP9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 FAM153BP0C7A2 387 aa9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 SLC35G6P0C7Q6 338 aa9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 HRH2P25021 359 aa9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 CRABP2P29373 138 aa9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 TYK2P29597 1187 aa9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 HNF4AP41235 474 aa9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 MSH2P43246 934 aa9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 SERPINB8P50452 374 aa9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 OCA2Q04671 838 aa9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 ZNF844Q08AG5 666 aa9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 C19orf57Q0VDD7 668 aa9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 ILF2Q12905 390 aaKnown RBP9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 NKG7Q16617 165 aa9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 NDUFA9Q16795 377 aa9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 PRTGQ2VWP7 1150 aa9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 FAM153CQ494X1 144 aa9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 CRTC2Q53ET0 693 aaPredicted RBP9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 OVCH1Q7RTY7 1134 aa9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 ANKS4BQ8N8V4 417 aa9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 KCT2Q8NC54 265 aa9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 CAMKVQ8NCB2 501 aa9.26□□□□□ -0.93
RTFDC1-205ENST00000466260 LSM14AQ8ND56 463 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms