RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 PLA2G16P53816 162 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 PCDH1Q08174 1060 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 GRSF1Q12849 480 aaKnown RBP eCLIP17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 CDK5R2Q13319 367 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 SLBPQ14493 270 aaKnown RBP eCLIP17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 NFE2L1Q14494 772 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 GTF2IRD2BQ6EKJ0 949 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 MED27Q6P2C8 311 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 CRTC3Q6UUV7 619 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 ARMCX6Q7L4S7 300 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 TRMT11Q7Z4G4 463 aaKnown RBP17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 GTF2IRD2Q86UP8 949 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 ZC3H7AQ8IWR0 971 aaKnown RBP17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 NPAS3Q8IXF0 933 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 NRSN1Q8IZ57 195 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 NAGSQ8N159 534 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 PGBD3Q8N328 593 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 C2orf73Q8N5S3 287 aaPredicted RBP17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 PIK3C3Q8NEB9 887 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 ZFP90Q8TF47 636 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 RAD9AQ99638 391 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 DGCR6LQ9BY27 220 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 TM9SF3Q9HD45 589 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 GPATCH2Q9NW75 528 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 SIRT5Q9NXA8 310 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 MUC22E2RYF6 1773 aaPredicted RBP17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 MGAT4DA6NG13 374 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 TRIM64BA6NI03 449 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 TMEM229AB2RXF0 380 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 C6P13671 934 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 GPR1P46091 355 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 RAD23AP54725 363 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 IL5RAQ01344 420 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 BNIP3Q12983 259 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 E2F2Q14209 437 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 RGNQ15493 299 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 C9orf64Q5T6V5 341 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 EIF3MQ7L2H7 374 aaKnown RBP17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 ZNF740Q8NDX6 193 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 SP7Q8TDD2 431 aaPredicted RBP17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 NUS1Q96E22 293 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 OR51B5Q9H339 312 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 PDP1Q9P0J1 537 aaPredicted RBP17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 RAPGEFL1Q9UHV5 662 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 GCM2O75603 506 aaPredicted RBP17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 MYOGP15173 224 aa17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 HOXA9P31269 272 aa17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 FMO3P31513 532 aa17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 IQCCQ4KMZ1 466 aa17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 FNDC3BQ53EP0 1204 aaKnown RBP17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 COX20Q5RI15 118 aa17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 KDM4DQ6B0I6 523 aa17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 CAPN13Q6MZZ7 669 aaPredicted RBP17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 ERICH5Q6P6B1 374 aa17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 WDR48Q8TAF3 677 aa17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 HCAR2Q8TDS4 363 aa17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 COQ8BQ96D53 544 aa17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 IL17FQ96PD4 163 aa17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 TMEM121BQ9BXQ6 578 aaPredicted RBP17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 GABARAPL1Q9H0R8 117 aa17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 RPS6KA6Q9UK32 745 aa17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 PLAGL1Q9UM63 463 aa17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 ORC6Q9Y5N6 252 aa17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 KIF26AQ9ULI4 1882 aaPredicted RBP17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 NINQ8N4C6 2090 aa17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 PSMD11O00231 422 aa17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 SLC9A3R1O14745 358 aaPredicted RBP17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 MAN1A2O60476 641 aa17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 KLHL18O94889 574 aa17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 ASMTP46597 345 aa17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 HBA1P69905 142 aa17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 TAP2Q03519 686 aa17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 NFATC3Q12968 1075 aa17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 PRSS53Q2L4Q9 553 aa17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 SPIN4Q56A73 249 aa17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 COMMD6Q7Z4G1 85 aa17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 ETFBKMTQ8IXQ9 262 aa17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 LRRC56Q8IYG6 542 aaPredicted RBP17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 CELF5Q8N6W0 485 aaKnown RBP17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 OR4A15Q8NGL6 344 aa17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 CIDECQ96AQ7 238 aaPredicted RBP17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 RHNO1Q9BSD3 238 aa17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 BTNL2Q9UIR0 455 aa17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 SAMHD1Q9Y3Z3 626 aaKnown RBP17.98■□□□□ 0.47
TSPAN4-210ENST00000464987 TRPM6Q9BX84 2022 aa17.97■□□□□ 0.47
TSPAN4-210ENST00000464987 A0A0J9YVX5 310 aa17.97■□□□□ 0.47
TSPAN4-210ENST00000464987 PIPSLA2A3N6 862 aa17.97■□□□□ 0.47
TSPAN4-210ENST00000464987 OPN1SWP03999 348 aa17.97■□□□□ 0.47
TSPAN4-210ENST00000464987 ITGAMP11215 1152 aa17.97■□□□□ 0.47
TSPAN4-210ENST00000464987 PCSK2P16519 638 aa17.97■□□□□ 0.47
TSPAN4-210ENST00000464987 TNFRSF1BP20333 461 aa17.97■□□□□ 0.47
TSPAN4-210ENST00000464987 RYKP34925 604 aa17.97■□□□□ 0.47
TSPAN4-210ENST00000464987 KCNJ10P78508 379 aa17.97■□□□□ 0.47
TSPAN4-210ENST00000464987 MPEG1Q2M385 716 aa17.97■□□□□ 0.47
TSPAN4-210ENST00000464987 GAB4Q2WGN9 574 aa17.97■□□□□ 0.47
TSPAN4-210ENST00000464987 ANKDD1AQ495B1 522 aa17.97■□□□□ 0.47
TSPAN4-210ENST00000464987 BCL7AQ4VC05 210 aa17.97■□□□□ 0.47
TSPAN4-210ENST00000464987 ZC3H12BQ5HYM0 836 aaKnown RBP17.97■□□□□ 0.47
TSPAN4-210ENST00000464987 TMEM240Q5SV17 173 aa17.97■□□□□ 0.47
TSPAN4-210ENST00000464987 FAM180BQ6P0A1 224 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms