RNA–Protein interactions for RNA: ENST00000464756.6

NFXL1-203, Transcript of nuclear transcription factor, X-box binding like 1, humanhuman

TSL 1 (best)

Gene NFXL1, Length 3,865 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFXL1-203ENST00000464756 COPS4Q9BT78 406 aa12.39□□□□□ -0.43
NFXL1-203ENST00000464756 SRMSQ9H3Y6 488 aa12.39□□□□□ -0.43
NFXL1-203ENST00000464756 RC3H2Q9HBD1 1191 aaKnown RBP12.39□□□□□ -0.43
NFXL1-203ENST00000464756 MRPS30Q9NP92 439 aaKnown RBP12.39□□□□□ -0.43
NFXL1-203ENST00000464756 ZNF232Q9UNY5 417 aa12.39□□□□□ -0.43
NFXL1-203ENST00000464756 OR10H1Q9Y4A9 318 aa12.39□□□□□ -0.43
NFXL1-203ENST00000464756 TET1Q8NFU7 2136 aa12.39□□□□□ -0.43
NFXL1-203ENST00000464756 TRBC2A0A5B9 178 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 OR52A4PA6NMU1 304 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 KPNA4O00629 521 aaPredicted RBP12.38□□□□□ -0.43
NFXL1-203ENST00000464756 SDC1P18827 310 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 POLR2IP36954 125 aaKnown RBP12.38□□□□□ -0.43
NFXL1-203ENST00000464756 PTSQ03393 145 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 SFSWAPQ12872 951 aaKnown RBP12.38□□□□□ -0.43
NFXL1-203ENST00000464756 HYAL2Q12891 473 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 ADGRG5Q8IZF4 528 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 OR7G3Q8NG95 312 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 STON2Q8WXE9 905 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 NEIL2Q969S2 332 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 C12orf43Q96C57 262 aaKnown RBP12.38□□□□□ -0.43
NFXL1-203ENST00000464756 MTERF3Q96E29 417 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 CEP44Q9C0F1 390 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 CWH43Q9H720 699 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 PTTG2Q9NZH5 202 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 STOX2Q9P2F5 926 aaPredicted RBP12.38□□□□□ -0.43
NFXL1-203ENST00000464756 PSMD11O00231 422 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 AP3D1O14617 1153 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 CCNDBP1O95273 360 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 HOXB2P14652 356 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 KDELR2P33947 212 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 RGS1Q08116 209 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 TOP3AQ13472 1001 aaPredicted RBP12.38□□□□□ -0.43
NFXL1-203ENST00000464756 NPTX1Q15818 432 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 INAQ16352 499 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 SPANXN2Q5MJ10 180 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 CCSAPQ6IQ19 270 aaPredicted RBP12.38□□□□□ -0.43
NFXL1-203ENST00000464756 RNF44Q7L0R7 432 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 ZNF551Q7Z340 670 aaPredicted RBP12.38□□□□□ -0.43
NFXL1-203ENST00000464756 TERB1Q8NA31 727 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 MYRFLQ96LU7 910 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 HMG20AQ9NP66 347 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 GALNT8Q9NY28 637 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 TVP23BQ9NYZ1 205 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 RPS6KB2Q9UBS0 482 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 ZNF282Q9UDV7 671 aaPredicted RBP12.38□□□□□ -0.43
NFXL1-203ENST00000464756 MAPRE3Q9UPY8 281 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 ERGIC3Q9Y282 383 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 MICAL3Q7RTP6 2002 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 TRIM43BA6NCK2 446 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 TMEM202A6NGA9 273 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 PLOD2O00469 737 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 OR7A17O14581 309 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 APOL3O95236 402 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 HSD17B1P14061 328 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 TYRP1P17643 537 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 AZGP1P25311 298 aaKnown RBP12.38□□□□□ -0.43
NFXL1-203ENST00000464756 CCR8P51685 355 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 PTPN5P54829 565 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 ILF3Q12906 894 aaKnown RBP eCLIP12.38□□□□□ -0.43
NFXL1-203ENST00000464756 TARDBPQ13148 414 aaKnown RBP eCLIP12.38□□□□□ -0.43
NFXL1-203ENST00000464756 CYBRD1Q53TN4 286 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 SMARCD3Q6STE5 483 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 GHDCQ8N2G8 530 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 MARVELD2Q8N4S9 558 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 CAMKK1Q8N5S9 505 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 TRAM1L1Q8N609 369 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 ZNF740Q8NDX6 193 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 MCFD2Q8NI22 146 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 TRMT2BQ96GJ1 504 aaKnown RBP12.38□□□□□ -0.43
NFXL1-203ENST00000464756 SLC12A9Q9BXP2 914 aa12.38□□□□□ -0.43
NFXL1-203ENST00000464756 DNAAF2Q9NVR5 837 aaKnown RBP12.38□□□□□ -0.43
NFXL1-203ENST00000464756 A0A1B0GTW7 788 aa12.37□□□□□ -0.43
NFXL1-203ENST00000464756 EFCAB10A6NFE3 127 aa12.37□□□□□ -0.43
NFXL1-203ENST00000464756 H3BNX3 289 aa12.37□□□□□ -0.43
NFXL1-203ENST00000464756 ADAMDEC1O15204 470 aa12.37□□□□□ -0.43
NFXL1-203ENST00000464756 UGT2B11O75310 529 aa12.37□□□□□ -0.43
NFXL1-203ENST00000464756 MATN4O95460 622 aa12.37□□□□□ -0.43
NFXL1-203ENST00000464756 JUPP14923 745 aa12.37□□□□□ -0.43
NFXL1-203ENST00000464756 HTR1EP28566 365 aa12.37□□□□□ -0.43
NFXL1-203ENST00000464756 GSTM5P46439 218 aa12.37□□□□□ -0.43
NFXL1-203ENST00000464756 PSMD7P51665 324 aa12.37□□□□□ -0.43
NFXL1-203ENST00000464756 RGS8P57771 180 aaPredicted RBP12.37□□□□□ -0.43
NFXL1-203ENST00000464756 DEFA1P59665 94 aa12.37□□□□□ -0.43
NFXL1-203ENST00000464756 DEFA3P59666 94 aa12.37□□□□□ -0.43
NFXL1-203ENST00000464756 MYBPC1Q00872 1141 aa12.37□□□□□ -0.43
NFXL1-203ENST00000464756 ZNF763Q0D2J5 394 aa12.37□□□□□ -0.43
NFXL1-203ENST00000464756 IHHQ14623 411 aa12.37□□□□□ -0.43
NFXL1-203ENST00000464756 VMACQ2NL98 169 aa12.37□□□□□ -0.43
NFXL1-203ENST00000464756 DCST1Q5T197 706 aa12.37□□□□□ -0.43
NFXL1-203ENST00000464756 LIPIQ6XZB0 460 aa12.37□□□□□ -0.43
NFXL1-203ENST00000464756 MACC1Q6ZN28 852 aa12.37□□□□□ -0.43
NFXL1-203ENST00000464756 CDK20Q8IZL9 346 aa12.37□□□□□ -0.43
NFXL1-203ENST00000464756 ZNF784Q8NCA9 323 aaPredicted RBP12.37□□□□□ -0.43
NFXL1-203ENST00000464756 PDFQ9HBH1 243 aa12.37□□□□□ -0.43
NFXL1-203ENST00000464756 EHD3Q9NZN3 535 aa12.37□□□□□ -0.43
NFXL1-203ENST00000464756 SMIM30A4D0T7 59 aa12.37□□□□□ -0.43
NFXL1-203ENST00000464756 LSM1O15116 133 aaKnown RBP12.37□□□□□ -0.43
NFXL1-203ENST00000464756 CH25HO95992 272 aa12.37□□□□□ -0.43
NFXL1-203ENST00000464756 C1SP09871 688 aa12.37□□□□□ -0.43
NFXL1-203ENST00000464756 TIMP2P16035 220 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms