RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 PTCD3Q96EY7 689 aaKnown RBP13.82□□□□□ -0.2
SQSTM1-205ENST00000464493 MACROD1Q9BQ69 325 aa13.82□□□□□ -0.2
SQSTM1-205ENST00000464493 PITHD1Q9GZP4 211 aaPredicted RBP13.82□□□□□ -0.2
SQSTM1-205ENST00000464493 ACTL8Q9H568 366 aa13.82□□□□□ -0.2
SQSTM1-205ENST00000464493 ZNF304Q9HCX3 659 aa13.82□□□□□ -0.2
SQSTM1-205ENST00000464493 ZFP69BQ9UJL9 534 aa13.82□□□□□ -0.2
SQSTM1-205ENST00000464493 CDC14AQ9UNH5 594 aa13.82□□□□□ -0.2
SQSTM1-205ENST00000464493 PLAAQ9Y263 795 aa13.82□□□□□ -0.2
SQSTM1-205ENST00000464493 LRRC14BA6NHZ5 514 aa13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 STX16-NPEPL1H3BU86 382 aa13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 STX16O14662 325 aa13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 NKX2-8O15522 239 aa13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 NDUFS4O43181 175 aa13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 CREG1O75629 220 aa13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 WFS1O76024 890 aa13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 SIX3O95343 332 aaPredicted RBP13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 SERPIND1P05546 499 aa13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 CD63P08962 238 aa13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 TAC1P20366 129 aa13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 CASP2P42575 452 aa13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 CCT5P48643 541 aa13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 RPS18P62269 152 aaKnown RBP13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 CHIT1Q13231 466 aa13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 LAPTM5Q13571 262 aa13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 FAM53BQ14153 422 aa13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 DOC2AQ14183 400 aa13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 SLC9A5Q14940 896 aa13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 TBCCQ15814 346 aa13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 TMEM214Q6NUQ4 689 aaKnown RBP13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 TMIGD1Q6UXZ0 262 aa13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 OVCH1Q7RTY7 1134 aa13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 ANKRD53Q8N9V6 530 aa13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 KCT2Q8NC54 265 aa13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 TRPV3Q8NET8 790 aa13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 COL26A1Q96A83 441 aa13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 MVB12AQ96EY5 273 aa13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 TMEM109Q9BVC6 243 aa13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 DRC3Q9H069 523 aa13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 NT5DC2Q9H857 520 aa13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 RRAGDQ9NQL2 400 aaPredicted RBP13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 SLC22A11Q9NSA0 550 aa13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 COPG2Q9UBF2 871 aa13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 LGALS13Q9UHV8 139 aa13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 TCFL5Q9UL49 500 aa13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 MAU2Q9Y6X3 613 aa13.81□□□□□ -0.2
SQSTM1-205ENST00000464493 CCDC88CQ9P219 2028 aa13.8□□□□□ -0.2
SQSTM1-205ENST00000464493 E2F3O00716 465 aa13.8□□□□□ -0.2
SQSTM1-205ENST00000464493 GLRA3O75311 464 aa13.8□□□□□ -0.2
SQSTM1-205ENST00000464493 ERLIN1O75477 346 aa13.8□□□□□ -0.2
SQSTM1-205ENST00000464493 RECKO95980 971 aa13.8□□□□□ -0.2
SQSTM1-205ENST00000464493 ALBP02768 609 aa13.8□□□□□ -0.2
SQSTM1-205ENST00000464493 KRT4P19013 534 aa13.8□□□□□ -0.2
SQSTM1-205ENST00000464493 EEF1DP29692 281 aaKnown RBP13.8□□□□□ -0.2
SQSTM1-205ENST00000464493 CRHR1P34998 444 aa13.8□□□□□ -0.2
SQSTM1-205ENST00000464493 PIK3CGP48736 1102 aa13.8□□□□□ -0.2
SQSTM1-205ENST00000464493 CYP4F2P78329 520 aa13.8□□□□□ -0.2
SQSTM1-205ENST00000464493 NFKB2Q00653 900 aa13.8□□□□□ -0.2
SQSTM1-205ENST00000464493 RGS1Q08116 209 aa13.8□□□□□ -0.2
SQSTM1-205ENST00000464493 PCDH1Q08174 1060 aa13.8□□□□□ -0.2
SQSTM1-205ENST00000464493 GTF2H2Q13888 395 aa13.8□□□□□ -0.2
SQSTM1-205ENST00000464493 ERV3-1Q14264 604 aa13.8□□□□□ -0.2
SQSTM1-205ENST00000464493 HIST2H2ACQ16777 129 aaPredicted RBP13.8□□□□□ -0.2
SQSTM1-205ENST00000464493 CRTC2Q53ET0 693 aaPredicted RBP13.8□□□□□ -0.2
SQSTM1-205ENST00000464493 PAGE2BQ5JRK9 111 aa13.8□□□□□ -0.2
SQSTM1-205ENST00000464493 HIST2H2AA3Q6FI13 130 aa13.8□□□□□ -0.2
SQSTM1-205ENST00000464493 GTF2H2CQ6P1K8 395 aa13.8□□□□□ -0.2
SQSTM1-205ENST00000464493 MRPL14Q6P1L8 145 aaKnown RBP13.8□□□□□ -0.2
SQSTM1-205ENST00000464493 SYVN1Q86TM6 617 aa13.8□□□□□ -0.2
SQSTM1-205ENST00000464493 TTLQ8NG68 377 aa13.8□□□□□ -0.2
SQSTM1-205ENST00000464493 NT5CQ8TCD5 201 aa13.8□□□□□ -0.2
SQSTM1-205ENST00000464493 MOCOSQ96EN8 888 aa13.8□□□□□ -0.2
SQSTM1-205ENST00000464493 MMABQ96EY8 250 aaPredicted RBP13.8□□□□□ -0.2
SQSTM1-205ENST00000464493 EFCAB11Q9BUY7 163 aa13.8□□□□□ -0.2
SQSTM1-205ENST00000464493 ZNF490Q9ULM2 529 aaPredicted RBP13.8□□□□□ -0.2
SQSTM1-205ENST00000464493 LHX6Q9UPM6 363 aa13.8□□□□□ -0.2
SQSTM1-205ENST00000464493 PADI2Q9Y2J8 665 aa13.8□□□□□ -0.2
SQSTM1-205ENST00000464493 MRPS2Q9Y399 296 aaKnown RBP13.8□□□□□ -0.2
SQSTM1-205ENST00000464493 A0A0A6YYC8 382 aaPredicted RBP13.79□□□□□ -0.2
SQSTM1-205ENST00000464493 A8MT66 165 aa13.79□□□□□ -0.2
SQSTM1-205ENST00000464493 I3L1I5 382 aaPredicted RBP13.79□□□□□ -0.2
SQSTM1-205ENST00000464493 COPEO14579 308 aa13.79□□□□□ -0.2
SQSTM1-205ENST00000464493 PRPF4O43172 522 aaKnown RBP eCLIP13.79□□□□□ -0.21e-8■■■■□ 19.6
SQSTM1-205ENST00000464493 FOXS1O43638 330 aa13.79□□□□□ -0.2
SQSTM1-205ENST00000464493 KLF7O75840 302 aaPredicted RBP13.79□□□□□ -0.2
SQSTM1-205ENST00000464493 SERPINA6P08185 405 aa13.79□□□□□ -0.2
SQSTM1-205ENST00000464493 PRKAR1AP10644 381 aa13.79□□□□□ -0.2
SQSTM1-205ENST00000464493 CD22P20273 847 aa13.79□□□□□ -0.2
SQSTM1-205ENST00000464493 GSTM2P28161 218 aa13.79□□□□□ -0.2
SQSTM1-205ENST00000464493 AVPR1BP47901 424 aa13.79□□□□□ -0.2
SQSTM1-205ENST00000464493 SLC18A2Q05940 514 aa13.79□□□□□ -0.2
SQSTM1-205ENST00000464493 E2F2Q14209 437 aa13.79□□□□□ -0.2
SQSTM1-205ENST00000464493 COX15Q7KZN9 410 aa13.79□□□□□ -0.2
SQSTM1-205ENST00000464493 GOLGA7Q7Z5G4 137 aa13.79□□□□□ -0.2
SQSTM1-205ENST00000464493 TRABD2AQ86V40 505 aa13.79□□□□□ -0.2
SQSTM1-205ENST00000464493 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.79□□□□□ -0.2
SQSTM1-205ENST00000464493 IQCKQ8N0W5 287 aa13.79□□□□□ -0.2
SQSTM1-205ENST00000464493 C4orf33Q8N1A6 199 aa13.79□□□□□ -0.2
SQSTM1-205ENST00000464493 CREB3L4Q8TEY5 395 aa13.79□□□□□ -0.2
SQSTM1-205ENST00000464493 FKBP10Q96AY3 582 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms