RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 LIPAP38571 399 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 RPL3P39023 403 aaKnown RBP6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 ASMTP46597 345 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 GZMMP51124 257 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 P2RX3P56373 397 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 C21orf58P58505 322 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 TIAL1Q01085 375 aaKnown RBP eCLIP6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 RING1Q06587 406 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 RBBP4Q09028 425 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 LAPTM5Q13571 262 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 GBX1Q14549 363 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 DMC1Q14565 340 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 IRF3Q14653 427 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 NKG7Q16617 165 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 SYT16Q17RD7 645 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 AAK1Q2M2I8 961 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 RFTN2Q52LD8 501 aaPredicted RBP6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 USP39Q53GS9 565 aaKnown RBP6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 DALRD3Q5D0E6 543 aaKnown RBP6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 SPANXN4Q5MJ08 99 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 UBXN11Q5T124 520 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 DDI2Q5TDH0 399 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 MFSD4BQ5TF39 518 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 LCN1P1Q5VSP4 162 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 PTRHD1Q6GMV3 140 aaKnown RBP6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 TAPT1Q6NXT6 567 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 LETMD1Q6P1Q0 360 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 C19orf48Q6RUI8 117 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 PLET1Q6UQ28 207 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 ADAMTSL4Q6UY14 1074 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 ZNF782Q6ZMW2 699 aaPredicted RBP6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 GPRIN1Q7Z2K8 1008 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 LRRC70Q7Z2Q7 622 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 C14orf80Q86SX3 495 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 LDB1Q86U70 411 aaPredicted RBP6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 CDH24Q86UP0 819 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 ENTHD1Q8IYW4 607 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 RDH10Q8IZV5 341 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 TMEM130Q8N3G9 435 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 FAM86B1Q8N7N1 296 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 CLDN22Q8N7P3 220 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 IL17RCQ8NAC3 791 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 C19orf18Q8NEA5 215 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 FAM83FQ8NEG4 500 aaPredicted RBP6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 LPCAT1Q8NF37 534 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 CD200R1Q8TD46 325 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 DNAJA4Q8WW22 397 aaPredicted RBP6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 ASB15Q8WXK1 588 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 SLC7A6Q92536 515 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 SGCDQ92629 289 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 USP7Q93009 1102 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 CXorf40BQ96DE9 158 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 FUBP3Q96I24 572 aaKnown RBP eCLIP6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 COQ7Q99807 217 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 EGFL8Q99944 293 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 MGME1Q9BQP7 344 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 CHCHD6Q9BRQ6 235 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 MND1Q9BWT6 205 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 GTPBP2Q9BX10 602 aaKnown RBP6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 BBS2Q9BXC9 721 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 TRIM8Q9BZR9 551 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 CD244Q9BZW8 370 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 IRF2BPLQ9H1B7 796 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 ACTL8Q9H568 366 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 ELOVL6Q9H5J4 265 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 CARS2Q9HA77 564 aaKnown RBP6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 TLR8Q9NR97 1041 aaKnown RBP6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 ACOXLQ9NUZ1 547 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 B3GNT2Q9NY97 397 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 SLC25A37Q9NYZ2 338 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 SLCO3A1Q9UIG8 710 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 RAB23Q9ULC3 237 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 ZNF490Q9ULM2 529 aaPredicted RBP6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 DUSP12Q9UNI6 340 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 CMAHPQ9Y471 501 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 ASB4Q9Y574 426 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 U3KQV3 271 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 COL4A5P29400 1685 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 ANKRD12Q6UB98 2062 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 MCM3APO60318 1980 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 DOCK4Q8N1I0 1966 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 SCN8AQ9UQD0 1980 aa6.95□□□□□ -1.3
CLSTN1-204ENST00000464286 BRCA1P38398 1863 aaKnown RBP6.94□□□□□ -1.3
CLSTN1-204ENST00000464286 TNS1Q9HBL0 1735 aaKnown RBP6.94□□□□□ -1.3
CLSTN1-204ENST00000464286 OR51F1A6NGY5 319 aa6.94□□□□□ -1.3
CLSTN1-204ENST00000464286 NCF1BA6NI72 391 aaPredicted RBP6.94□□□□□ -1.3
CLSTN1-204ENST00000464286 NCF1CA8MVU1 366 aaPredicted RBP6.94□□□□□ -1.3
CLSTN1-204ENST00000464286 MAGEB17A8MXT2 336 aa6.94□□□□□ -1.3
CLSTN1-204ENST00000464286 TNFRSF11BO00300 401 aa6.94□□□□□ -1.3
CLSTN1-204ENST00000464286 OR7A17O14581 309 aa6.94□□□□□ -1.3
CLSTN1-204ENST00000464286 DSCR3O14972 297 aa6.94□□□□□ -1.3
CLSTN1-204ENST00000464286 SHOXO15266 292 aa6.94□□□□□ -1.3
CLSTN1-204ENST00000464286 INSIG1O15503 277 aa6.94□□□□□ -1.3
CLSTN1-204ENST00000464286 RGS5O15539 181 aa6.94□□□□□ -1.3
CLSTN1-204ENST00000464286 SEC14L5O43304 696 aa6.94□□□□□ -1.3
CLSTN1-204ENST00000464286 KIAA0513O60268 411 aa6.94□□□□□ -1.3
CLSTN1-204ENST00000464286 MITFO75030 526 aaPredicted RBP6.94□□□□□ -1.3
CLSTN1-204ENST00000464286 CNMDO75829 334 aa6.94□□□□□ -1.3
CLSTN1-204ENST00000464286 TSPAN12O95859 305 aa6.94□□□□□ -1.3
CLSTN1-204ENST00000464286 MOCS2O96007 188 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 179.6 ms