RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 MACROD1Q9BQ69 325 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 NDC1Q9BTX1 674 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 SLC7A5P2Q9GIP4 190 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 ACBD3Q9H3P7 528 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 CUTCQ9NTM9 273 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 SRPK3Q9UPE1 567 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 RUVBL1Q9Y265 456 aaKnown RBP11.25□□□□□ -0.61
CPNE1-221ENST00000462352 RNF11Q9Y3C5 154 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 TMEM120BA0PK00 339 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 HYKKA2RU49 373 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 NDUFS4O43181 175 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 MED26O95402 600 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 MLYCDO95822 493 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 OTCP00480 354 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 SERPIND1P05546 499 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 SLC35G6P0C7Q6 338 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 DHRS4L1P0CG22 281 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 LIPCP11150 499 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 GSTM2P28161 218 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 RORAP35398 523 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 SERPINB4P48594 390 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 ARSFP54793 590 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 ASPHQ12797 758 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 LCP2Q13094 533 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 GPS2Q13227 327 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 PWP1Q13610 501 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 CPSF6Q16630 551 aaKnown RBP eCLIP11.24□□□□□ -0.61
CPNE1-221ENST00000462352 FAM214AQ32MH5 1076 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 CFAP157Q5JU67 520 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 YOD1Q5VVQ6 348 aaPredicted RBP11.24□□□□□ -0.61
CPNE1-221ENST00000462352 ADNP2Q6IQ32 1131 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 MED27Q6P2C8 311 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 C6orf15Q6UXA7 325 aaPredicted RBP11.24□□□□□ -0.61
CPNE1-221ENST00000462352 FRMD7Q6ZUT3 714 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 TTLL10Q6ZVT0 673 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 DTX1Q86Y01 620 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 LAS2Q8IYD9 372 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 NLGN4XQ8N0W4 816 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 ARHGEF39Q8N4T4 335 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 ANKRD42Q8N9B4 389 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 TRPV3Q8NET8 790 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 NLGN4YQ8NFZ3 816 aaPredicted RBP11.24□□□□□ -0.61
CPNE1-221ENST00000462352 TTLQ8NG68 377 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 OR4F6Q8NGB9 312 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 NT5CQ8TCD5 201 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 CREB3L4Q8TEY5 395 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 UBE2E3Q969T4 207 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 C10orf90Q96M02 699 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 LRFN5Q96NI6 719 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 ZNF382Q96SR6 550 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 GATA5Q9BWX5 397 aaPredicted RBP11.24□□□□□ -0.61
CPNE1-221ENST00000462352 NLNQ9BYT8 704 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 DRC3Q9H069 523 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 RHBGQ9H310 441 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 DHCR7Q9UBM7 475 aaKnown RBP11.24□□□□□ -0.61
CPNE1-221ENST00000462352 ZNF225Q9UK10 706 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 MDC1Q14676 2089 aaKnown RBP11.24□□□□□ -0.61
CPNE1-221ENST00000462352 SDK2Q58EX2 2172 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 IGF2RP11717 2491 aa11.24□□□□□ -0.61
CPNE1-221ENST00000462352 AHCTF1Q8WYP5 2266 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 ANKDD1BA6NHY2 528 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 HMGB1P1B2RPK0 211 aaPredicted RBP11.23□□□□□ -0.61
CPNE1-221ENST00000462352 H0YIV9 168 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 MEN1O00255 615 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 DSCR3O14972 297 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 RAD1O60671 282 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 OR4F21O95013 312 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 PCNAP12004 261 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 ALAS2P22557 587 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 CCR10P46092 362 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 SLC18A1P54219 525 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 EMP3P54852 163 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 SNRPNP63162 240 aaKnown RBP11.23□□□□□ -0.61
CPNE1-221ENST00000462352 RGS1Q08116 209 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 HYAL2Q12891 473 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 MAP7Q14244 749 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 ZRSR2Q15696 482 aaKnown RBP11.23□□□□□ -0.61
CPNE1-221ENST00000462352 MUM1Q2TAK8 710 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 GGTA1PQ4G0N0 100 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 MANEAQ5SRI9 462 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 C1orf189Q5VU69 101 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 GARNL3Q5VVW2 1013 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 ZNF385CQ66K41 422 aaPredicted RBP11.23□□□□□ -0.61
CPNE1-221ENST00000462352 TMEM214Q6NUQ4 689 aaKnown RBP11.23□□□□□ -0.61
CPNE1-221ENST00000462352 LETMD1Q6P1Q0 360 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 VN1R5Q7Z5H4 357 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 SYVN1Q86TM6 617 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 NUDCD3Q8IVD9 361 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 DSELQ8IZU8 1212 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 DTWD1Q8N5C7 304 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 ESX1Q8N693 406 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 KCT2Q8NC54 265 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 OR7G3Q8NG95 312 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 SNIP1Q8TAD8 396 aaKnown RBP11.23□□□□□ -0.61
CPNE1-221ENST00000462352 PROKR1Q8TCW9 393 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 SREK1Q8WXA9 508 aaKnown RBP11.23□□□□□ -0.61
CPNE1-221ENST00000462352 CCT6BQ92526 530 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 SEC16BQ96JE7 1060 aa11.23□□□□□ -0.61
CPNE1-221ENST00000462352 MAGEB10Q96LZ2 347 aaPredicted RBP11.23□□□□□ -0.61
CPNE1-221ENST00000462352 GBP5Q96PP8 586 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms