RNA–Protein interactions for RNA: ENST00000461889.1

TRAPPC10-205, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-205ENST00000461889 SCINQ9Y6U3 715 aa6.32□□□□□ -1.4
TRAPPC10-205ENST00000461889 FREM3P0C091 2139 aa6.32□□□□□ -1.4
TRAPPC10-205ENST00000461889 LOC105369274A0A096LPK9 316 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 A0A0G2JMM0 328 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 LOC102723532A0A0G2JNH3 316 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 A0A1W2PPB8 328 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 A0A1W2PRS3 328 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 POM121CA8CG34 1229 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 KIR3DP1A8MWS1 328 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 FOXN3O00409 490 aaPredicted RBP6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 KPNA5O15131 536 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 FOXS1O43638 330 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 SGTAO43765 313 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 ZNF354AO60765 605 aaPredicted RBP6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 LSM8O95777 96 aaKnown RBP6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 HKR1P10072 659 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 CD79BP40259 229 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 HCAR3P49019 387 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 PRSS12P56730 875 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 BPIFB4P59827 614 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 ACTN3Q08043 901 aaPredicted RBP6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 ITKQ08881 620 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 GALNT2Q10471 571 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 FOXF2Q12947 444 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 RPA4Q13156 261 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 SCGB2A2Q13296 93 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 PTK6Q13882 451 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 SYT16Q17RD7 645 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 ZNF658BQ4V348 819 aaPredicted RBP6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 SCYL2Q6P3W7 929 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 PM20D2Q8IYS1 436 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 CEP57L1Q8IYX8 460 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 OR4N4Q8N0Y3 316 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 ARHGEF39Q8N4T4 335 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 PLPP5Q8NEB5 264 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 NEIL3Q8TAT5 605 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 AKAP1Q92667 903 aaKnown RBP eCLIP6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 C11orf24Q96F05 449 aaPredicted RBP6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 JMJD8Q96S16 334 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 PRDM14Q9GZV8 571 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 COG4Q9H9E3 785 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 IL26Q9NPH9 171 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 KCMF1Q9P0J7 381 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 STOX2Q9P2F5 926 aaPredicted RBP6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 FAM8A1Q9UBU6 413 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 DMGDHQ9UI17 866 aaKnown RBP6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 IKZF3Q9UKT9 509 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 PCDHB10Q9UN67 800 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 ZNF711Q9Y462 761 aa6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 MAGED1Q9Y5V3 778 aaPredicted RBP6.31□□□□□ -1.4
TRAPPC10-205ENST00000461889 SACSQ9NZJ4 4579 aa6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 MSTNO14793 375 aa6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 DAPK3O43293 454 aa6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 RCBTB2O95199 551 aa6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 TGFAP01135 160 aa6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 UGT1A6P19224 532 aa6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 MSH3P20585 1137 aa6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 FMO4P31512 558 aa6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 CCKARP32238 428 aa6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 HMGCLP35914 325 aa6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 UGT2B10P36537 528 aa6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 ZNF135P52742 658 aaPredicted RBP6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 NUDT6P53370 316 aa6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 CRYZQ08257 329 aaKnown RBP6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 MINDY4Q4G0A6 757 aa6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 C22orf34Q6ZV56 151 aa6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 RNF44Q7L0R7 432 aa6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 REC114Q7Z4M0 266 aa6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 TBC1D21Q8IYX1 336 aa6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 RASGEF1CQ8N431 466 aa6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 LINC00301Q8NCQ3 95 aa6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 OR5AR1Q8NGP9 310 aa6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 C10orf105Q8TEF2 133 aa6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 SMAP2Q8WU79 429 aaPredicted RBP6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 CCDC47Q96A33 483 aaKnown RBP6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 CABS1Q96KC9 395 aa6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 TEKT5Q96M29 485 aa6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 WWC2-AS2Q96NR7 200 aa6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 SRPK1Q96SB4 655 aaKnown RBP6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 TIMP4Q99727 224 aa6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 GPR63Q9BZJ6 419 aa6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 UGT1A10Q9HAW8 530 aa6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 QPCTLQ9NXS2 382 aa6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 TMEFF2Q9UIK5 374 aaPredicted RBP6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 PACSIN3Q9UKS6 424 aa6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 TTC7AQ9ULT0 858 aaPredicted RBP6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 DNAH1Q9P2D7 4330 aa6.3□□□□□ -1.4
TRAPPC10-205ENST00000461889 A0A0U1RQJ8 604 aa6.29□□□□□ -1.4
TRAPPC10-205ENST00000461889 PES1O00541 588 aaKnown RBP6.29□□□□□ -1.4
TRAPPC10-205ENST00000461889 KDM1AO60341 852 aa6.29□□□□□ -1.4
TRAPPC10-205ENST00000461889 EIF2S1P05198 315 aaKnown RBP6.29□□□□□ -1.4
TRAPPC10-205ENST00000461889 ERVK-10P10266 1014 aa6.29□□□□□ -1.4
TRAPPC10-205ENST00000461889 GPD1P21695 349 aa6.29□□□□□ -1.4
TRAPPC10-205ENST00000461889 PTPN6P29350 595 aa6.29□□□□□ -1.4
TRAPPC10-205ENST00000461889 PDHA2P29803 388 aa6.29□□□□□ -1.4
TRAPPC10-205ENST00000461889 GCH1P30793 250 aa6.29□□□□□ -1.4
TRAPPC10-205ENST00000461889 PCK1P35558 622 aa6.29□□□□□ -1.4
TRAPPC10-205ENST00000461889 SLC6A12P48065 614 aa6.29□□□□□ -1.4
TRAPPC10-205ENST00000461889 PRLHRP49683 370 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms